Published in Science on July 01, 2005
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Theileria parva candidate vaccine antigens recognized by immune bovine cytotoxic T lymphocytes. Proc Natl Acad Sci U S A (2006) 1.36
The toxoplasma apicoplast phosphate translocator links cytosolic and apicoplast metabolism and is essential for parasite survival. Cell Host Microbe (2009) 1.34
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Membrane transporters in the relict plastid of malaria parasites. Proc Natl Acad Sci U S A (2006) 1.24
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Jumbled genomes: missing Apicomplexan synteny. Mol Biol Evol (2011) 1.11
Analysis of the transcriptome of the protozoan Theileria parva using MPSS reveals that the majority of genes are transcriptionally active in the schizont stage. Nucleic Acids Res (2005) 1.09
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Theileria apicoplast as a target for chemotherapy. Antimicrob Agents Chemother (2008) 0.95
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A novel strategy for the identification of antigens that are recognised by bovine MHC class I restricted cytotoxic T cells in a protozoan infection using reverse vaccinology. Immunome Res (2007) 0.89
New resources for functional analysis of omics data for the genus Aspergillus. BMC Genomics (2011) 0.89
Conservation and divergence of known apicomplexan transcriptional regulons. BMC Genomics (2010) 0.88
Genetics. Themes and variations in apicomplexan parasite biology. Science (2005) 0.88
Effects of N-glycan precursor length diversity on quality control of protein folding and on protein glycosylation. Semin Cell Dev Biol (2014) 0.88
Whole genome mapping and re-organization of the nuclear and mitochondrial genomes of Babesia microti isolates. PLoS One (2013) 0.88
A method for identification of highly conserved elements and evolutionary analysis of superphylum Alveolata. BMC Bioinformatics (2016) 0.88
From molecule to diagnostic tool: Theileria annulata surface protein TaSP. Parasitol Res (2007) 0.87
Analysis of the spatial and temporal arrangement of transcripts over intergenic regions in the human malarial parasite Plasmodium falciparum. BMC Genomics (2013) 0.87
Molecular parasitology in the 21st century. Essays Biochem (2011) 0.87
Influence of host immunity on parasite diversity in Theileria parva. Infect Immun (2007) 0.86
Characterization and annotation of Babesia orientalis apicoplast genome. Parasit Vectors (2015) 0.85
Apicomplexan perforin-like proteins. Commun Integr Biol (2010) 0.85
Molecular genomic approaches to infectious diseases in resource-limited settings. PLoS Med (2009) 0.84
Construction of a genetic map for Theileria parva: identification of hotspots of recombination. Int J Parasitol (2011) 0.84
The apicoplast genome of Leucocytozoon caulleryi, a pathogenic apicomplexan parasite of the chicken. Parasitol Res (2013) 0.84
Genome cartography: charting the apicomplexan genome. Trends Parasitol (2011) 0.83
Theileria parva and the bovine CTL response: down but not out? Parasite Immunol (2006) 0.83
Properties of non-coding DNA and identification of putative cis-regulatory elements in Theileria parva. BMC Genomics (2008) 0.83
Differential expression of three members of the multidomain adhesion CCp family in Babesia bigemina, Babesia bovis and Theileria equi. PLoS One (2013) 0.83
Whole-genome sequencing of Theileria parva strains provides insight into parasite migration and diversification in the African continent. DNA Res (2013) 0.82
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Evolving insights into protein trafficking to the multiple compartments of the apicomplexan plastid. J Eukaryot Microbiol (2009) 0.82
Comparative genomics of cryptosporidium. Int J Genomics (2013) 0.81
RPS8--a new informative DNA marker for phylogeny of Babesia and Theileria parasites in China. PLoS One (2013) 0.81
Retrotransposons and tandem repeat sequences in the nuclear genomes of cryptomonad algae. J Mol Evol (2007) 0.81
Ycf93 (Orf105), a small apicoplast-encoded membrane protein in the relict plastid of the malaria parasite Plasmodium falciparum that is conserved in Apicomplexa. PLoS One (2014) 0.81
Proteomic analysis of the Theileria annulata schizont. Int J Parasitol (2012) 0.81
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The genomes of three stocks comprising the most widely utilized live sporozoite Theileria parva vaccine exhibit very different degrees and patterns of sequence divergence. BMC Genomics (2015) 0.80
Large, rapidly evolving gene families are at the forefront of host-parasite interactions in Apicomplexa. Parasitology (2014) 0.80
Genome-wide analysis of peptidase content and expression in a virulent and attenuated Babesia bovis strain pair. Mol Biochem Parasitol (2011) 0.80
Characterisation of gp34, a GPI-anchored protein expressed by schizonts of Theileria parva and T. annulata. Mol Biochem Parasitol (2010) 0.79
Theileria-infected cell line from an African buffalo (Syncerus caffer). Parasitol Res (2009) 0.79
A nondiscriminating glutamyl-tRNA synthetase in the plasmodium apicoplast: the first enzyme in an indirect aminoacylation pathway. J Biol Chem (2013) 0.79
Cis regulatory motifs and antisense transcriptional control in the apicomplexan Theileria parva. BMC Genomics (2016) 0.79
Molecular characterization of a Theileria lestoquardi gene encoding for immunogenic protein splice variants. Parasitol Res (2006) 0.79
Plant-type trehalose synthetic pathway in cryptosporidium and some other apicomplexans. PLoS One (2010) 0.78
High-resolution genotyping and mapping of recombination and gene conversion in the protozoan Theileria parva using whole genome sequencing. BMC Genomics (2012) 0.78
Absolute Quantification of the Host-To-Parasite DNA Ratio in Theileria parva-Infected Lymphocyte Cell Lines. PLoS One (2016) 0.78
Regulation of Expression and Evolution of Genes in Plastids of Rhodophytic Branch. Life (Basel) (2016) 0.78
Homopolymer tract organization in the human malarial parasite Plasmodium falciparum and related Apicomplexan parasites. BMC Genomics (2014) 0.77
Bovipain-2, the falcipain-2 ortholog, is expressed in intraerythrocytic stages of the tick-transmitted hemoparasite Babesia bovis. Parasit Vectors (2010) 0.77
Babesia bovis: a bipartite signal directs the glutamyl-tRNA synthetase to the apicoplast. Exp Parasitol (2012) 0.77
Insights into the genome structure and copy-number variation of Eimeria tenella. BMC Genomics (2012) 0.77
Codon Adaptation of Plastid Genes. PLoS One (2016) 0.77
Comparative Analysis of Apicoplast-Targeted Protein Extension Lengths in Apicomplexan Parasites. Biomed Res Int (2015) 0.77
TparvaDB: a database to support Theileria parva vaccine development. Database (Oxford) (2011) 0.76
Immigration control in the vertebrate body with special reference to chimerism. Chimerism (2012) 0.76
Plasmodium Apicoplast Gln-tRNAGln Biosynthesis Utilizes a Unique GatAB Amidotransferase Essential for Erythrocytic Stage Parasites. J Biol Chem (2015) 0.76
Multi-membrane-bound structures of Apicomplexa: II. the ovoid mitochondrial cytoplasmic (OMC) complex of Toxoplasma gondii tachyzoites. Parasitol Res (2006) 0.76
Approaches to vaccination against Theileria parva and Theileria annulata. Parasite Immunol (2016) 0.75
First isolation and establishment of in vitro culture of Theileria lestoquardi from a naturally infected cow. J Parasit Dis (2013) 0.75
Genome microsatellite diversity within the Apicomplexa phylum. Mol Genet Genomics (2016) 0.75
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol (2009) 235.12
Fast gapped-read alignment with Bowtie 2. Nat Methods (2012) 83.79
TopHat: discovering splice junctions with RNA-Seq. Bioinformatics (2009) 81.13
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation. Nat Biotechnol (2010) 75.21
Versatile and open software for comparing large genomes. Genome Biol (2004) 49.45
Identifying bacterial genes and endosymbiont DNA with Glimmer. Bioinformatics (2007) 47.63
The diploid genome sequence of an individual human. PLoS Biol (2007) 44.80
Genome sequence of the human malaria parasite Plasmodium falciparum. Nature (2002) 37.89
Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks. Nat Protoc (2012) 35.75
TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions. Genome Biol (2013) 32.42
The minimum information about a genome sequence (MIGS) specification. Nat Biotechnol (2008) 31.04
Genome sequence of the Brown Norway rat yields insights into mammalian evolution. Nature (2004) 24.40
The Sorcerer II Global Ocean Sampling expedition: northwest Atlantic through eastern tropical Pacific. PLoS Biol (2007) 23.58
Human papillomavirus and survival of patients with oropharyngeal cancer. N Engl J Med (2010) 22.74
Enzymatic assembly of DNA molecules up to several hundred kilobases. Nat Methods (2009) 22.47
The genome sequence of the malaria mosquito Anopheles gambiae. Science (2002) 20.36
Genomic and epigenomic landscapes of adult de novo acute myeloid leukemia. N Engl J Med (2013) 19.87
Evolution of genes and genomes on the Drosophila phylogeny. Nature (2007) 18.01
ACT: the Artemis Comparison Tool. Bioinformatics (2005) 17.91
Fast algorithms for large-scale genome alignment and comparison. Nucleic Acids Res (2002) 17.31
Evolutionary and biomedical insights from the rhesus macaque genome. Science (2007) 16.21
Accurate determination of microbial diversity from 454 pyrosequencing data. Nat Methods (2009) 15.25
Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial "pan-genome". Proc Natl Acad Sci U S A (2005) 14.59
Clonal evolution in relapsed acute myeloid leukaemia revealed by whole-genome sequencing. Nature (2012) 14.33
The Sorcerer II Global Ocean Sampling expedition: expanding the universe of protein families. PLoS Biol (2007) 13.99
FLASH: fast length adjustment of short reads to improve genome assemblies. Bioinformatics (2011) 13.71
Creation of a bacterial cell controlled by a chemically synthesized genome. Science (2010) 13.45
Quake: quality-aware detection and correction of sequencing errors. Genome Biol (2010) 12.52
Large-scale sequencing of human influenza reveals the dynamic nature of viral genome evolution. Nature (2005) 11.99
The genome of the African trypanosome Trypanosoma brucei. Science (2005) 11.48
The Chlamydomonas genome reveals the evolution of key animal and plant functions. Science (2007) 11.15
Improving the Arabidopsis genome annotation using maximal transcript alignment assemblies. Nucleic Acids Res (2003) 11.03
EcoCyc: a comprehensive database resource for Escherichia coli. Nucleic Acids Res (2005) 11.01
Complete chemical synthesis, assembly, and cloning of a Mycoplasma genitalium genome. Science (2008) 10.90
The EcoCyc Database. Nucleic Acids Res (2002) 10.42
Amplification-free Illumina sequencing-library preparation facilitates improved mapping and assembly of (G+C)-biased genomes. Nat Methods (2009) 10.41
The genome sequence of Bacillus anthracis Ames and comparison to closely related bacteria. Nature (2003) 10.38
Searching for SNPs with cloud computing. Genome Biol (2009) 10.12
The genetic basis of early T-cell precursor acute lymphoblastic leukaemia. Nature (2012) 9.89
Comparative genome sequencing for discovery of novel polymorphisms in Bacillus anthracis. Science (2002) 9.83
The origin and evolution of mutations in acute myeloid leukemia. Cell (2012) 9.66
A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome. Science (2002) 9.59
Comparative genome and proteome analysis of Anopheles gambiae and Drosophila melanogaster. Science (2002) 9.43
Genome sequence of Aedes aegypti, a major arbovirus vector. Science (2007) 9.19
Artemis and ACT: viewing, annotating and comparing sequences stored in a relational database. Bioinformatics (2008) 9.17
Genome sequence and comparative analysis of the model rodent malaria parasite Plasmodium yoelii yoelii. Nature (2002) 8.92