Published in Plant J on January 01, 2006
Poplar carbohydrate-active enzymes. Gene identification and expression analyses. Plant Physiol (2006) 3.30
Forest tree genomics: growing resources and applications. Nat Rev Genet (2011) 2.40
Arabinogalactan-proteins: key regulators at the cell surface? Plant Physiol (2010) 2.15
Dissecting the molecular basis of the regulation of wood formation by auxin in hybrid aspen. Plant Cell (2008) 1.97
Sucrose synthase affects carbon partitioning to increase cellulose production and altered cell wall ultrastructure. Proc Natl Acad Sci U S A (2009) 1.53
Lignin and biomass: a negative correlation for wood formation and lignin content in trees. Plant Physiol (2010) 1.52
Functional characterization of poplar wood-associated NAC domain transcription factors. Plant Physiol (2009) 1.41
Xyloglucan: the molecular muscle of trees. Ann Bot (2008) 1.32
Dissection of the transcriptional program regulating secondary wall biosynthesis during wood formation in poplar. Plant Physiol (2011) 1.31
Association genetics of wood physical traits in the conifer white spruce and relationships with gene expression. Genetics (2011) 1.30
SND1 transcription factor-directed quantitative functional hierarchical genetic regulatory network in wood formation in Populus trichocarpa. Plant Cell (2013) 1.25
A genomic approach to suberin biosynthesis and cork differentiation. Plant Physiol (2007) 1.18
Genome-wide transcriptome analysis of the transition from primary to secondary stem development in Populus trichocarpa. BMC Genomics (2010) 1.17
Ethylene is an endogenous stimulator of cell division in the cambial meristem of Populus. Proc Natl Acad Sci U S A (2009) 1.17
Differential expansion and expression of alpha- and beta-tubulin gene families in Populus. Plant Physiol (2007) 1.12
Microarray analysis of flax (Linum usitatissimum L.) stems identifies transcripts enriched in fibre-bearing phloem tissues. Mol Genet Genomics (2007) 1.11
Identification of genes involved in cell wall biogenesis in grasses by differential gene expression profiling of elongating and non-elongating maize internodes. J Exp Bot (2011) 1.11
Generation and analysis of expressed sequence tags from six developing xylem libraries in Pinus radiata D. Don. BMC Genomics (2009) 1.08
Global comparative transcriptome analysis identifies gene network regulating secondary xylem development in Arabidopsis thaliana. Mol Genet Genomics (2006) 1.05
Apoplast proteome reveals that extracellular matrix contributes to multistress response in poplar. BMC Genomics (2010) 1.04
Genome-wide analysis of LIM gene family in Populus trichocarpa, Arabidopsis thaliana, and Oryza sativa. DNA Res (2007) 1.01
Pectin biosynthesis: GALS1 in Arabidopsis thaliana is a β-1,4-galactan β-1,4-galactosyltransferase. Plant Cell (2012) 1.00
A novel isoform of sucrose synthase is targeted to the cell wall during secondary cell wall synthesis in cotton fiber. Plant Physiol (2011) 0.99
Transcriptional and Hormonal Regulation of Gravitropism of Woody Stems in Populus. Plant Cell (2015) 0.98
Gibberellin is required for the formation of tension wood and stem gravitropism in Acacia mangium seedlings. Ann Bot (2012) 0.98
Distribution of glucomannans and xylans in poplar xylem and their changes under tension stress. Planta (2012) 0.96
Characterization of NAC domain transcription factors implicated in control of vascular cell differentiation in Arabidopsis and Populus. Planta (2010) 0.96
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The poplar PtrWNDs are transcriptional activators of secondary cell wall biosynthesis. Plant Signal Behav (2010) 0.93
Development of cellulosic secondary walls in flax fibers requires beta-galactosidase. Plant Physiol (2011) 0.91
Gibberellin-induced formation of tension wood in angiosperm trees. Planta (2008) 0.91
Aberrant phenotype and transcriptome expression during fiber cell wall thickening caused by the mutation of the Im gene in immature fiber (im) mutant in Gossypium hirsutum L. BMC Genomics (2014) 0.90
Microarray analysis of developing flax hypocotyls identifies novel transcripts correlated with specific stages of phloem fibre differentiation. Ann Bot (2008) 0.90
Proteomics of plasma membranes from poplar trees reveals tissue distribution of transporters, receptors, and proteins in cell wall formation. Mol Cell Proteomics (2009) 0.89
X-ray micro-computed tomography in willow reveals tissue patterning of reaction wood and delay in programmed cell death. BMC Plant Biol (2015) 0.89
Investigation of tension wood formation and 2,6-dichlorbenzonitrile application in short rotation coppice willow composition and enzymatic saccharification. Biotechnol Biofuels (2011) 0.88
Reprogramming of gene expression during compression wood formation in pine: coordinated modulation of S-adenosylmethionine, lignin and lignan related genes. BMC Plant Biol (2012) 0.87
Hormonal signals involved in the regulation of cambial activity, xylogenesis and vessel patterning in trees. Plant Cell Rep (2013) 0.86
The poplar MYB master switches bind to the SMRE site and activate the secondary wall biosynthetic program during wood formation. PLoS One (2013) 0.86
Reaction wood - a key cause of variation in cell wall recalcitrance in willow. Biotechnol Biofuels (2012) 0.86
Transcriptome profiling of radiata pine branches reveals new insights into reaction wood formation with implications in plant gravitropism. BMC Genomics (2013) 0.85
Exploring candidate genes for pericarp russet pigmentation of sand pear (Pyrus pyrifolia) via RNA-Seq data in two genotypes contrasting for pericarp color. PLoS One (2014) 0.84
Dynamic changes in transcripts during regeneration of the secondary vascular system in Populus tomentosa Carr. revealed by cDNA microarrays. BMC Genomics (2009) 0.84
Expression analysis of LIM gene family in poplar, toward an updated phylogenetic classification. BMC Res Notes (2012) 0.84
Cell wall modifications in maize pulvini in response to gravitational stress. Plant Physiol (2011) 0.83
Expression profile of small RNAs in Acacia mangium secondary xylem tissue with contrasting lignin content - potential regulatory sequences in monolignol biosynthetic pathway. BMC Genomics (2011) 0.83
Characterization of microRNAs expressed during secondary wall biosynthesis in Acacia mangium. PLoS One (2012) 0.81
A microarray-based method for the parallel analysis of genotypes and expression profiles of wood-forming tissues in Eucalyptus grandis. BMC Biotechnol (2009) 0.81
Aspen Tension Wood Fibers Contain β-(1→4)-Galactans and Acidic Arabinogalactans Retained by Cellulose Microfibrils in Gelatinous Walls. Plant Physiol (2015) 0.81
Genome-wide identification of novel long non-coding RNAs in Populus tomentosa tension wood, opposite wood and normal wood xylem by RNA-seq. Planta (2014) 0.81
MicroRNAs expression patterns in the response of poplar woody root to bending stress. Planta (2015) 0.80
Comprehensive transcriptome analysis of developing xylem responding to artificial bending and gravitational stimuli in Betula platyphylla. PLoS One (2014) 0.80
Genome-wide characterization and expression profiling of the AUXIN RESPONSE FACTOR (ARF) gene family in Eucalyptus grandis. PLoS One (2014) 0.80
Transcript profiling of Populus tomentosa genes in normal, tension, and opposite wood by RNA-seq. BMC Genomics (2015) 0.79
Chitinase-like (CTL) and cellulose synthase (CESA) gene expression in gelatinous-type cellulosic walls of flax (Linum usitatissimum L.) bast fibers. PLoS One (2014) 0.79
Comparison of envelope-related genes in unicellular and filamentous cyanobacteria. Comp Funct Genomics (2007) 0.79
The Plant Cell Wall: A Complex and Dynamic Structure As Revealed by the Responses of Genes under Stress Conditions. Front Plant Sci (2016) 0.79
Poplar woody taproot under bending stress: the asymmetric response of the convex and concave sides. Ann Bot (2016) 0.79
Characterization and expression analysis of a fiber differentially expressed Fasciclin-like arabinogalactan protein gene in Sea Island cotton fibers. PLoS One (2013) 0.78
G-fibre cell wall development in willow stems during tension wood induction. J Exp Bot (2015) 0.78
Enhancing digestibility and ethanol yield of Populus wood via expression of an engineered monolignol 4-O-methyltransferase. Nat Commun (2016) 0.77
Meta-transcriptomics indicates biotic cross-tolerance in willow trees cultivated on petroleum hydrocarbon contaminated soil. BMC Plant Biol (2015) 0.76
Genetic manipulation of putrescine biosynthesis reprograms the cellular transcriptome and the metabolome. BMC Plant Biol (2016) 0.75
Overexpression of poplar xylem sucrose synthase in tobacco leads to a thickened cell wall and increased height. PLoS One (2015) 0.75
Altered Expression of Genes Implicated in Xylan Biosynthesis Affects Penetration Resistance against Powdery Mildew. Front Plant Sci (2017) 0.75
Evolutionary basins of attraction and convergence in plants and animals. Commun Integr Biol (2013) 0.75
Rice transcriptome analysis to identify possible herbicide quinclorac detoxification genes. Front Genet (2015) 0.75
A core gut microbiome in obese and lean twins. Nature (2008) 52.30
Genome-wide association analysis identifies loci for type 2 diabetes and triglyceride levels. Science (2007) 51.70
Meta-analysis of genome-wide association data and large-scale replication identifies additional susceptibility loci for type 2 diabetes. Nat Genet (2008) 35.06
The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics. Nucleic Acids Res (2008) 27.83
Glucose control and vascular complications in veterans with type 2 diabetes. N Engl J Med (2008) 25.70
Twelve type 2 diabetes susceptibility loci identified through large-scale association analysis. Nat Genet (2010) 16.96
Genetic variants in novel pathways influence blood pressure and cardiovascular disease risk. Nature (2011) 13.25
Genome-wide association study identifies eight loci associated with blood pressure. Nat Genet (2009) 12.44
The carbohydrate-active enzymes database (CAZy) in 2013. Nucleic Acids Res (2013) 10.24
Variants in KCNQ1 are associated with susceptibility to type 2 diabetes mellitus. Nat Genet (2008) 9.39
Diet drives convergence in gut microbiome functions across mammalian phylogeny and within humans. Science (2011) 8.88
Gut microbiota from twins discordant for obesity modulate metabolism in mice. Science (2013) 8.81
Clinical risk factors, DNA variants, and the development of type 2 diabetes. N Engl J Med (2008) 8.70
A human protein atlas for normal and cancer tissues based on antibody proteomics. Mol Cell Proteomics (2005) 7.13
Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins. Proc Natl Acad Sci U S A (2010) 7.09
Genetic variation in GIPR influences the glucose and insulin responses to an oral glucose challenge. Nat Genet (2010) 6.66
An evolving hierarchical family classification for glycosyltransferases. J Mol Biol (2003) 6.48
A genecentric Human Protein Atlas for expression profiles based on antibodies. Mol Cell Proteomics (2008) 6.45
Metabolic reconstruction for metagenomic data and its application to the human microbiome. PLoS Comput Biol (2012) 6.27
Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88. Nat Biotechnol (2007) 6.21
Evolution of symbiotic bacteria in the distal human intestine. PLoS Biol (2007) 5.79
Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium. Nature (2010) 5.79
Integration of plant responses to environmentally activated phytohormonal signals. Science (2006) 5.46
Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina). Nat Biotechnol (2008) 5.38
Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita. Nat Biotechnol (2008) 5.19
Canadian Association of Gastroenterology and the Canadian Digestive Health Foundation: Guidelines on colon cancer screening. Can J Gastroenterol (2004) 5.09
Mechanisms by which common variants in the TCF7L2 gene increase risk of type 2 diabetes. J Clin Invest (2007) 5.02
The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes. Science (2012) 4.93
Reappraisal of European guidelines on hypertension management: a European Society of Hypertension Task Force document. J Hypertens (2009) 4.87
Genome sequence of the lignocellulose degrading fungus Phanerochaete chrysosporium strain RP78. Nat Biotechnol (2004) 4.85
Common variant in MTNR1B associated with increased risk of type 2 diabetes and impaired early insulin secretion. Nat Genet (2008) 4.84
The Norway spruce genome sequence and conifer genome evolution. Nature (2013) 4.74
The impact of a consortium of fermented milk strains on the gut microbiome of gnotobiotic mice and monozygotic twins. Sci Transl Med (2011) 4.24
Common missense variant in the glucokinase regulatory protein gene is associated with increased plasma triglyceride and C-reactive protein but lower fasting glucose concentrations. Diabetes (2008) 4.20
Dividing the large glycoside hydrolase family 13 into subfamilies: towards improved functional annotations of alpha-amylase-related proteins. Protein Eng Des Sel (2006) 4.13
Characterizing a model human gut microbiota composed of members of its two dominant bacterial phyla. Proc Natl Acad Sci U S A (2009) 4.09
Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas. Science (2009) 4.05
Visualization of GC/TOF-MS-based metabolomics data for identification of biochemically interesting compounds using OPLS class models. Anal Chem (2007) 4.04
Gene-centric metagenomics of the fiber-adherent bovine rumen microbiome reveals forage specific glycoside hydrolases. Proc Natl Acad Sci U S A (2009) 4.03
Recognition and degradation of plant cell wall polysaccharides by two human gut symbionts. PLoS Biol (2011) 3.97
The lack of a systematic validation of reference genes: a serious pitfall undervalued in reverse transcription-polymerase chain reaction (RT-PCR) analysis in plants. Plant Biotechnol J (2008) 3.81
Association of common variants in NPPA and NPPB with circulating natriuretic peptides and blood pressure. Nat Genet (2009) 3.81
Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea. PLoS Genet (2011) 3.52
Expansion of the enzymatic repertoire of the CAZy database to integrate auxiliary redox enzymes. Biotechnol Biofuels (2013) 3.30
Poplar carbohydrate-active enzymes. Gene identification and expression analyses. Plant Physiol (2006) 3.30
GC-MS libraries for the rapid identification of metabolites in complex biological samples. FEBS Lett (2005) 3.29
Novel loci for adiponectin levels and their influence on type 2 diabetes and metabolic traits: a multi-ethnic meta-analysis of 45,891 individuals. PLoS Genet (2012) 3.21
Radial artery grafts vs saphenous vein grafts in coronary artery bypass surgery: a randomized trial. JAMA (2011) 3.03
Recent structural insights into the expanding world of carbohydrate-active enzymes. Curr Opin Struct Biol (2005) 3.01
Long-term patency of saphenous vein and left internal mammary artery grafts after coronary artery bypass surgery: results from a Department of Veterans Affairs Cooperative Study. J Am Coll Cardiol (2004) 2.99
An auxin gradient and maximum in the Arabidopsis root apex shown by high-resolution cell-specific analysis of IAA distribution and synthesis. Plant Cell (2009) 2.97
Cyanophora paradoxa genome elucidates origin of photosynthesis in algae and plants. Science (2012) 2.93
Lifestyle transitions in plant pathogenic Colletotrichum fungi deciphered by genome and transcriptome analyses. Nat Genet (2012) 2.92
Obligate biotrophy features unraveled by the genomic analysis of rust fungi. Proc Natl Acad Sci U S A (2011) 2.84
Percutaneous coronary intervention versus coronary bypass surgery in United States veterans with diabetes. J Am Coll Cardiol (2013) 2.79
Genomic and metabolic adaptations of Methanobrevibacter smithii to the human gut. Proc Natl Acad Sci U S A (2007) 2.79
Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils. Appl Environ Microbiol (2009) 2.75
Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion. Proc Natl Acad Sci U S A (2009) 2.71
The plant cell wall-decomposing machinery underlies the functional diversity of forest fungi. Science (2011) 2.67
Diverse lifestyles and strategies of plant pathogenesis encoded in the genomes of eighteen Dothideomycetes fungi. PLoS Pathog (2012) 2.66
New insights into pectin methylesterase structure and function. Trends Plant Sci (2007) 2.64
Périgord black truffle genome uncovers evolutionary origins and mechanisms of symbiosis. Nature (2010) 2.61
Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity, and stealth pathogenesis. PLoS Genet (2011) 2.58
Evolution, substrate specificity and subfamily classification of glycoside hydrolase family 5 (GH5). BMC Evol Biol (2012) 2.54
Analysis of the human tissue-specific expression by genome-wide integration of transcriptomics and antibody-based proteomics. Mol Cell Proteomics (2013) 2.53
Genetic similarities between latent autoimmune diabetes in adults, type 1 diabetes, and type 2 diabetes. Diabetes (2008) 2.51
Genome sequence of the model mushroom Schizophyllum commune. Nat Biotechnol (2010) 2.44
The genome sequence of the model ascomycete fungus Podospora anserina. Genome Biol (2008) 2.43
A global view of protein expression in human cells, tissues, and organs. Mol Syst Biol (2009) 2.41