Published in Nucleic Acids Res on January 01, 1977
Coaxial stacking of helixes enhances binding of oligoribonucleotides and improves predictions of RNA folding. Proc Natl Acad Sci U S A (1994) 8.06
Reactions at the termini of tRNA with T4 RNA ligase. Nucleic Acids Res (1978) 5.93
Protected deoxyribonucleoside-3' aryl phosphodiesters as key intermediates in polynucleotide synthesis. Construction of an icosanucleotide analogous to the sequence at the ends of Rous sarcoma virus 35S RNA. Nucleic Acids Res (1979) 3.40
Dinucleoside pyrophosphate are substrates for T4-induced RNA ligase. Proc Natl Acad Sci U S A (1977) 1.94
Bacteriophage T4 RNA ligase is gene 63 product, the protein that promotes tail fiber attachment to the baseplate. Proc Natl Acad Sci U S A (1977) 1.54
Biotin and fluorescent labeling of RNA using T4 RNA ligase. Nucleic Acids Res (1983) 1.29
Polynucleotide kinase from a T4 mutant which lacks the 3' phosphatase activity. Nucleic Acids Res (1978) 1.27
Direct labeling of RNA with multiple biotins allows sensitive expression profiling of acute leukemia class predictor genes. Nucleic Acids Res (2004) 1.16
Addition of mononucleotides to oligoribonucleotide acceptors with T4 RNA ligase. Proc Natl Acad Sci U S A (1978) 1.12
The synthesis of oligodeoxyribonucleotides using RNA ligase. Nucleic Acids Res (1979) 1.07
Use of T4 RNA ligase to construct model substrates for a ribosomal RNA maturation endonuclease. Proc Natl Acad Sci U S A (1978) 1.06
A new method for 3'-labelling of polyribonucleotides by phosphorylation with RNA ligase and its application to the 3'-modification for joining reactions. Nucleic Acids Res (1979) 1.04
The pH dependence of hairpin ribozyme catalysis reflects ionization of an active site adenine. J Biol Chem (2011) 1.01
tRNA anticodon replacement experiments show that ribosomal frameshifting can be caused by doublet decoding. Proc Natl Acad Sci U S A (1986) 0.99
Role of the constant uridine in binding of yeast tRNAPhe anticodon arm to 30S ribosomes. Nucleic Acids Res (1982) 0.97
Bacteriophage T4 RNA ligase: preparation of a physically homogeneous, nuclease-free enzyme from hyperproducing infected cells. Nucleic Acids Res (1977) 0.96
RNA ligase reaction products in plasmolyzed Escherichia coli cells infected by T4 bacteriophage. Proc Natl Acad Sci U S A (1979) 0.96
Practical and general synthesis of 5'-adenylated RNA (5'-AppRNA). RNA (2004) 0.93
Elongation of oligonucleotides in the 3'-direction with activated mononucleotides and their analogs using RNA ligase. Nucleic Acids Res (1980) 0.91
Addition of oligonucleotides to the 5'-terminus of DNA by T4 RNA ligase. Nucleic Acids Res (1979) 0.87
Synthesis and reactivity of intermediates formed in the T4 RNA ligase reaction. Nucleic Acids Res (1987) 0.83
Simplified methods for large scale enzymatic synthesis of oligoribonucleotides. Nucleic Acids Res (1978) 0.80
Ligation with T4 RNA ligase of an oligodeoxyribonucleotide to covalently-linked cross-sectional base-pair analogues of short, normal, and long dimensions. Nucleic Acids Res (1991) 0.79
Molecular design of a eukaryotic messenger RNA and its chemical synthesis. Nucleic Acids Res (1992) 0.79
Enzymatic synthesis of a segment of bacteriophage Qbeta coat protein gene. Nucleic Acids Res (1978) 0.75
Adenylylation of small RNA sequencing adapters using the TS2126 RNA ligase I. RNA (2015) 0.75
DNA ligase: structure, mechanism, and function. Science (1974) 5.81
T4-induced RNA ligase joins single-stranded oligoribonucleotides. Proc Natl Acad Sci U S A (1975) 2.84
Studies on ribonucleic acid ligase. Characterization of an adenosine triphosphate-inorganic pyrophosphate exchange reaction and demonstration of an enzyme-adenylate complex with T4 bacteriophage-induced enzyme. J Biol Chem (1974) 2.44
Joining of ribooligonucleotides with T4 RNA ligase and identification of the oligonucleotide-adenylate intermediate. Nucleic Acids Res (1976) 2.31
Complementary oligonucleotide binding to the anticodon loop of fMet-transfer RNA. Nature (1970) 2.13
Determination of recognition sites of T4 RNA ligase on the 3'-OH and 5' -P termini of polyribonucleotide chains. Nature (1975) 1.91
Purification and properties of bacteriophage T4-induced RNA ligase. Arch Biochem Biophys (1976) 1.34
Improved estimation of secondary structure in ribonucleic acids. Nat New Biol (1973) 46.33
Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates. Nucleic Acids Res (1987) 25.34
Estimation of secondary structure in ribonucleic acids. Nature (1971) 20.52
Stability of ribonucleic acid double-stranded helices. J Mol Biol (1974) 16.35
Synthesis of small RNAs using T7 RNA polymerase. Methods Enzymol (1989) 10.82
3'-terminal labelling of RNA with T4 RNA ligase. Nature (1978) 10.69
A small catalytic oligoribonucleotide. Nature (1987) 8.73
Stability of RNA hairpin loops: A 6 -C m -U 6 . J Mol Biol (1973) 8.39
Biochemical and physical characterization of an unmodified yeast phenylalanine transfer RNA transcribed in vitro. Proc Natl Acad Sci U S A (1988) 7.76
Specific labeling of 3' termini of RNA with T4 RNA ligase. Methods Enzymol (1980) 7.55
Reactions at the termini of tRNA with T4 RNA ligase. Nucleic Acids Res (1978) 5.93
CUUCGG hairpins: extraordinarily stable RNA secondary structures associated with various biochemical processes. Proc Natl Acad Sci U S A (1988) 5.50
Self-complementary oligoribonucleotides: effects of helix defects and guanylic acid-cytidylic acid base pairs. J Mol Biol (1971) 4.54
RNA binding site of R17 coat protein. Biochemistry (1987) 4.20
Sequence-specific interaction of R17 coat protein with its ribonucleic acid binding site. Biochemistry (1983) 4.09
Enzymatic oligoribonucleotide synthesis with T4 RNA ligase. Biochemistry (1978) 3.99
3'-Phosphatase activity in T4 polynucleotide kinase. Biochemistry (1977) 3.86
Sequence requirements of the hammerhead RNA self-cleavage reaction. Biochemistry (1990) 3.64
Uniform binding of aminoacyl-tRNAs to elongation factor Tu by thermodynamic compensation. Science (2001) 3.54
Role of divalent metal ions in the hammerhead RNA cleavage reaction. Biochemistry (1991) 3.31
Characterization of RNA hairpin loop stability. Nucleic Acids Res (1988) 3.10
Evidence for the role of solvated metal hydroxide in the hammerhead cleavage mechanism. Biochemistry (1993) 2.91
Specific interaction between RNA phage coat proteins and RNA. Prog Nucleic Acid Res Mol Biol (1991) 2.84
T4-induced RNA ligase joins single-stranded oligoribonucleotides. Proc Natl Acad Sci U S A (1975) 2.84
Substrate sequence effects on "hammerhead" RNA catalytic efficiency. Proc Natl Acad Sci U S A (1990) 2.81
Kinetics of intermolecular cleavage by hammerhead ribozymes. Biochemistry (1992) 2.79
Self-complementary oligoribonucleotides: adenylic acid-uridylic acid block copolymers. J Mol Biol (1971) 2.78
Numbering system for the hammerhead. Nucleic Acids Res (1992) 2.74
In vitro selection of RNAs that undergo autolytic cleavage with Pb2+. Biochemistry (1992) 2.60
Role of a bulged A residue in a specific RNA-protein interaction. Biochemistry (1987) 2.52
A kinetic and thermodynamic framework for the hammerhead ribozyme reaction. Biochemistry (1994) 2.39
T7 RNA polymerase produces 5' end heterogeneity during in vitro transcription from certain templates. RNA (1998) 2.39
Nucleotides in yeast tRNAPhe required for the specific recognition by its cognate synthetase. Science (1989) 2.36
Interaction of R17 coat protein with synthetic variants of its ribonucleic acid binding site. Biochemistry (1983) 2.30
An RNA mutation that increases the affinity of an RNA-protein interaction. Nucleic Acids Res (1987) 2.25
Quantitative in situ hybridization of ribosomal RNA species to polytene chromosomes of Drosophila melanogaster. J Mol Biol (1977) 2.18
Folding of circularly permuted transfer RNAs. Science (1991) 2.14
Complementary oligonucleotide binding to the anticodon loop of fMet-transfer RNA. Nature (1970) 2.13
Hammerhead ribozyme kinetics. RNA (1998) 2.08
Kinetic and thermodynamic characterization of the R17 coat protein-ribonucleic acid interaction. Biochemistry (1983) 2.07
Ribonucleoprotein complexes of R17 coat protein and a translational operator analog. J Mol Biol (1988) 1.99
RNA template-directed RNA synthesis by T7 RNA polymerase. Proc Natl Acad Sci U S A (1994) 1.98
Dinucleoside pyrophosphate are substrates for T4-induced RNA ligase. Proc Natl Acad Sci U S A (1977) 1.94
Enzymatic replacement of the anticodon of yeast phenylalanine transfer ribonucleic acid. Biochemistry (1982) 1.94
Lead-catalyzed cleavage of yeast tRNAPhe mutants. Biochemistry (1990) 1.87
Tetraloops and RNA folding. Nature (1990) 1.87
Chemical and enzymatic synthesis of tRNAs for high-throughput crystallization. RNA (2001) 1.81
Thiophosphate interference experiments locate phosphates important for the hammerhead RNA self-cleavage reaction. Nucleic Acids Res (1990) 1.76
Photocrosslinking of 5-iodouracil-substituted RNA and DNA to proteins. Science (1993) 1.73
Mutants of the bacteriophage MS2 coat protein that alter its cooperative binding to RNA. Biochemistry (1995) 1.72
Structure of an unmodified tRNA molecule. Biochemistry (1989) 1.71
Inhibition of the hammerhead ribozyme cleavage reaction by site-specific binding of Tb. Science (1998) 1.66
Synthesis of modified nucleoside 3',5'-bisphosphates and their incorporation into oligoribonucleotides with T4 RNA ligase. Biochemistry (1978) 1.62
Joining of RNA molecules with RNA ligase. Methods Enzymol (1983) 1.62
Nucleoside and nucleotide inactivation of R17 coat protein: evidence for a transient covalent RNA-protein bond. Biochemistry (1985) 1.62
Role of the tertiary nucleotides in the interaction of yeast phenylalanine tRNA with its cognate synthetase. Biochemistry (1990) 1.60
Determination of RNA-protein contacts using thiophosphate substitutions. Biochemistry (1989) 1.60
The self-splicing RNA of Tetrahymena is trapped in a less active conformation by gel purification. Biochemistry (1990) 1.58
Escherichia coli DbpA is an RNA helicase that requires hairpin 92 of 23S rRNA. EMBO J (2001) 1.58
Involvement of a specific metal ion in the transition of the hammerhead ribozyme to its catalytic conformation. J Biol Chem (1997) 1.55
Studies on the hammerhead RNA self-cleaving domain. Gene (1989) 1.52
Comparison of the hammerhead cleavage reactions stimulated by monovalent and divalent cations. RNA (2001) 1.51
Specificity of hammerhead ribozyme cleavage. EMBO J (1996) 1.49
Complementary oligonucleotide binding to transfer RNA. J Mol Biol (1972) 1.49
Sequence-dependent structural variations of hammerhead RNA enzymes. Nucleic Acids Res (1990) 1.47
Proton NMR and structural features of a 24-nucleotide RNA hairpin. Biochemistry (1995) 1.47
Intact aminoacyl-tRNA is required to trigger GTP hydrolysis by elongation factor Tu on the ribosome. Biochemistry (2000) 1.47
A small metalloribozyme with a two-step mechanism. Nature (1992) 1.46
Specific RNA binding by Q beta coat protein. Biochemistry (1989) 1.45
Kinetic characterization of intramolecular and intermolecular hammerhead RNAs with stem II deletions. Proc Natl Acad Sci U S A (1994) 1.42
Roles of operator and non-operator RNA sequences in bacteriophage R17 capsid assembly. J Mol Biol (1988) 1.41
The Escherichia coli DEAD protein DbpA recognizes a small RNA hairpin in 23S rRNA. RNA (2001) 1.40
In vitro analysis of translational rate and accuracy with an unmodified tRNA. Biochemistry (1993) 1.40
A thermodynamic analysis of the sequence-specific binding of RNA by bacteriophage MS2 coat protein. Proc Natl Acad Sci U S A (1998) 1.40
The effect of base mismatches in the substrate recognition helices of hammerhead ribozymes on binding and catalysis. Nucleic Acids Res (1995) 1.39
Communicate across cultural lines. Wis Med J (1996) 1.39
Self-cleaving catalytic RNA. FASEB J (1993) 1.39
Cloning and biochemical characterization of Bacillus subtilis YxiN, a DEAD protein specifically activated by 23S rRNA: delineation of a novel sub-family of bacterial DEAD proteins. Nucleic Acids Res (1999) 1.35
A specific, UV-induced RNA-protein cross-link using 5-bromouridine-substituted RNA. Biochemistry (1991) 1.34
Specific interaction of anticodon loop residues with yeast phenylalanyl-tRNA synthetase. Biochemistry (1982) 1.32
Enzymatic synthesis of a 21-nucleotide coat protein binding fragment of R17 ribonucleic acid. Biochemistry (1982) 1.31
Determination of recognition nucleotides for Escherichia coli phenylalanyl-tRNA synthetase. Biochemistry (1992) 1.31
Inhibition of the hammerhead ribozyme by neomycin. RNA (1995) 1.31
Cooperative binding of R17 coat protein to RNA. Biochemistry (1990) 1.30
Quantitative assessment of EF-1alpha.GTP binding to aminoacyl-tRNAs, aminoacyl-viral RNA, and tRNA shows close correspondence to the RNA binding properties of EF-Tu. J Biol Chem (1999) 1.29
Kinetic analysis of the RNA-dependent adenosinetriphosphatase activity of DbpA, an Escherichia coli DEAD protein specific for 23S ribosomal RNA. Biochemistry (1998) 1.28
Binding of yeast tRNAPhe anticodon arm to Escherichia coli 30 S ribosomes. J Mol Biol (1983) 1.27
Polynucleotide kinase from a T4 mutant which lacks the 3' phosphatase activity. Nucleic Acids Res (1978) 1.27
Properties of an in vitro selected Pb2+ cleavage motif. Biochemistry (1994) 1.27
Guanosine modifications in runoff transcripts of synthetic transfer RNA-Phe genes microinjected into Xenopus oocytes. Biochim Biophys Acta (1990) 1.25
Hammerhead ribozymes with a faster cleavage rate. Biochemistry (1997) 1.25
Many of the conserved nucleotides of tRNA(Phe) are not essential for ternary complex formation and peptide elongation. EMBO J (1994) 1.24
Interaction of Escherichia coli host factor protein with oligoriboadenylates. Biochemistry (1980) 1.21
Aminoacylation of anticodon loop substituted yeast tyrosine transfer RNA. Biochemistry (1985) 1.20
A re-investigation of the thio effect at the hammerhead cleavage site. Nucleic Acids Res (1999) 1.20
A new assay for tRNA aminoacylation kinetics. RNA (1998) 1.19
Interactions of Escherichia coli RNA with bacteriophage MS2 coat protein: genomic SELEX. Nucleic Acids Res (2000) 1.19