Published in J Phys Chem B on April 10, 2007
Probing the folding transition state structure of the villin headpiece subdomain via side chain and backbone mutagenesis. J Am Chem Soc (2009) 1.23
Roles of hydrophobicity and charge distribution of cationic antimicrobial peptides in peptide-membrane interactions. J Biol Chem (2012) 1.14
Transmembrane orientation and possible role of the fusogenic peptide from parainfluenza virus 5 (PIV5) in promoting fusion. Proc Natl Acad Sci U S A (2011) 1.14
Effect of dehydration on the aggregation kinetics of two amyloid peptides. J Phys Chem B (2009) 1.14
Spectroscopic studies of protein folding: linear and nonlinear methods. Protein Sci (2011) 1.10
Effect of macromolecular crowding on protein folding dynamics at the secondary structure level. J Mol Biol (2009) 1.07
Sequence and crowding effects in the aggregation of a 10-residue fragment derived from islet amyloid polypeptide. Biophys J (2009) 0.98
An alpha-helical peptide in AOT micelles prefers to be localized at the water/headgroup interface. Biophys J (2009) 0.91
Infrared signature and folding dynamics of a helical beta-peptide. J Am Chem Soc (2010) 0.88
Solute's perspective on how trimethylamine oxide, urea, and guanidine hydrochloride affect water's hydrogen bonding ability. J Phys Chem B (2012) 0.87
The effect of charge-charge interactions on the kinetics of alpha-helix formation. Biophys J (2007) 0.81
Temperature dependence of water interactions with the amide carbonyls of α-helices. Biochemistry (2012) 0.81
Empirical maps for the calculation of amide I vibrational spectra of proteins from classical molecular dynamics simulations. J Phys Chem B (2014) 0.80
Biomolecular Crowding Arising from Small Molecules, Molecular Constraints, Surface Packing, and Nano-Confinement. J Phys Chem Lett (2015) 0.79
Probing the structure and dynamics of confined water in AOT reverse micelles. J Phys Chem B (2013) 0.79
Thermally induced protein unfolding probed by isotope-edited IR spectroscopy. J Phys Chem B (2012) 0.79
Thermal-induced dissociation and unfolding of homodimeric DsbC revealed by temperature-jump time-resolved infrared spectra. Biophys J (2009) 0.79
Hydration and vibrational dynamics of betaine (N,N,N-trimethylglycine). J Chem Phys (2015) 0.79
Power-law dependence of the melting temperature of ubiquitin on the volume fraction of macromolecular crowders. J Chem Phys (2011) 0.78
Infrared study of the folding mechanism of a helical hairpin: porcine PYY. Biochemistry (2010) 0.78
Sodium dodecyl sulfate monomers induce XAO peptide polyproline II to α-helix transition. J Phys Chem B (2014) 0.77
Infrared spectroscopy of proteins in reverse micelles. Biochim Biophys Acta (2012) 0.76
Exploring the role of hydration and confinement in the aggregation of amyloidogenic peptides Aβ(16-22) and Sup35(7-13) in AOT reverse micelles. J Chem Phys (2014) 0.76
Structural changes in the catalytic cycle of the Na+,K+-ATPase studied by infrared spectroscopy. Biophys J (2009) 0.76
The role of an L-leucine residue on the conformations of glycyl-L-leucine oligomers and its N- or C-terminal dependence: infrared absorption and Raman scattering studies. Eur Biophys J (2015) 0.75
Helix formation via conformation diffusion search. Proc Natl Acad Sci U S A (2002) 2.34
Using nitrile-derivatized amino acids as infrared probes of local environment. J Am Chem Soc (2003) 2.30
Ultrafast folding of alpha3D: a de novo designed three-helix bundle protein. Proc Natl Acad Sci U S A (2003) 1.57
A new method for determining the local environment and orientation of individual side chains of membrane-binding peptides. J Am Chem Soc (2004) 1.51
Cholesterol-dependent phase separation in cell-derived giant plasma-membrane vesicles. Biochem J (2009) 1.40
Understanding the key factors that control the rate of beta-hairpin folding. Proc Natl Acad Sci U S A (2004) 1.40
Trp zipper folding kinetics by molecular dynamics and temperature-jump spectroscopy. Proc Natl Acad Sci U S A (2004) 1.39
Site-Specific Spectroscopic Reporters of the Local Electric Field, Hydration, Structure, and Dynamics of Biomolecules. J Phys Chem Lett (2011) 1.36
Conformational distribution of a 14-residue peptide in solution: a fluorescence resonance energy transfer study. J Phys Chem B (2005) 1.35
A novel fluorescent probe for protein binding and folding studies: p-cyano-phenylalanine. Biopolymers (2006) 1.27
Ultrafast folding of a computationally designed Trp-cage mutant: Trp2-cage. J Phys Chem B (2006) 1.26
Probing the folding transition state structure of the villin headpiece subdomain via side chain and backbone mutagenesis. J Am Chem Soc (2009) 1.23
Site-specific hydration status of an amphipathic peptide in AOT reverse micelles. Langmuir (2007) 1.21
5-Cyanotryptophan as an Infrared Probe of Local Hydration Status of Proteins. Chem Phys Lett (2009) 1.21
Using an amino acid fluorescence resonance energy transfer pair to probe protein unfolding: application to the villin headpiece subdomain and the LysM domain. Biochemistry (2008) 1.18
The Two Dimensional Vibrational Echo of a Nitrile Probe of the Villin HP35 Protein. J Phys Chem Lett (2010) 1.15
Divalent cation-induced cluster formation by polyphosphoinositides in model membranes. J Am Chem Soc (2012) 1.14
Transmembrane orientation and possible role of the fusogenic peptide from parainfluenza virus 5 (PIV5) in promoting fusion. Proc Natl Acad Sci U S A (2011) 1.14
Effect of dehydration on the aggregation kinetics of two amyloid peptides. J Phys Chem B (2009) 1.14
Infrared study of the stability and folding kinetics of a 15-residue beta-hairpin. J Am Chem Soc (2003) 1.12
Spectroscopic studies of protein folding: linear and nonlinear methods. Protein Sci (2011) 1.10
Using two fluorescent probes to dissect the binding, insertion, and dimerization kinetics of a model membrane peptide. J Am Chem Soc (2009) 1.09
Nanosecond folding dynamics of a three-stranded beta-sheet. J Am Chem Soc (2006) 1.09
Probing the kinetics of membrane-mediated helix folding. J Phys Chem B (2006) 1.08
Folding kinetics of a naturally occurring helical peptide: implication of the folding speed limit of helical proteins. J Phys Chem B (2008) 1.08
Role of helix nucleation in the kinetics of binding of mastoparan X to phospholipid bilayers. Biochemistry (2007) 1.08
Effect of macromolecular crowding on protein folding dynamics at the secondary structure level. J Mol Biol (2009) 1.07
Understanding the mechanism of beta-hairpin folding via phi-value analysis. Biochemistry (2006) 1.06
Limitations of yeast surface display in engineering proteins of high thermostability. Protein Eng Des Sel (2006) 1.06
Achieving secondary structural resolution in kinetic measurements of protein folding: a case study of the folding mechanism of Trp-cage. Angew Chem Int Ed Engl (2011) 1.05
Tuning the cooperativity of the helix-coil transition by aqueous reverse micelles. J Phys Chem B (2006) 1.01
Photophysics of a Fluorescent Non-natural Amino Acid: p-Cyanophenylalanine. Chem Phys Lett (2010) 0.99
Alpha 1-antitrypsin polymerization: a fluorescence correlation spectroscopic study. Biochemistry (2005) 0.97
Dissecting the membrane binding and insertion kinetics of a pHLIP peptide. Biochemistry (2008) 0.97
Site-specific infrared probes of proteins. Annu Rev Phys Chem (2015) 0.96
Selective incorporation of nitrile-based infrared probes into proteins via cysteine alkylation. Biochemistry (2010) 0.95
Direct assessment of the α-helix nucleation time. J Phys Chem B (2011) 0.95
Using thioamides to site-specifically interrogate the dynamics of hydrogen bond formation in β-sheet folding. J Am Chem Soc (2012) 0.95
Understanding the folding mechanism of an alpha-helical hairpin. Biochemistry (2006) 0.94
Light-induced helix formation. J Am Chem Soc (2002) 0.93
Non-natural amino acid fluorophores for one- and two-step fluorescence resonance energy transfer applications. Anal Biochem (2009) 0.93
Length Dependent Helix-Coil Transition Kinetics of Nine Alanine-Based Peptides. J Phys Chem B (2004) 0.93
A one-dimensional free energy surface does not account for two-probe folding kinetics of protein alpha(3)D. J Chem Phys (2009) 0.93
Determining beta-sheet stability by Fourier transform infrared difference spectra. Biopolymers (2004) 0.90
Computational Modeling of the Nitrile Stretching Vibration of 5-Cyanoindole in Water. J Phys Chem Lett (2010) 0.90
T-jump infrared study of the folding mechanism of coiled-coil GCN4-p1. Biophys J (2005) 0.90
Denaturant-induced expansion and compaction of a multi-domain protein: IgG. J Mol Biol (2008) 0.89
Computational design of a β-peptide that targets transmembrane helices. J Am Chem Soc (2011) 0.89
Infrared signature and folding dynamics of a helical beta-peptide. J Am Chem Soc (2010) 0.88
Native state conformational heterogeneity of HP35 revealed by time-resolved FRET. J Phys Chem B (2012) 0.88
Solute's perspective on how trimethylamine oxide, urea, and guanidine hydrochloride affect water's hydrogen bonding ability. J Phys Chem B (2012) 0.87
The anomalous pKa of Tyr-9 in glutathione S-transferase A1-1 catalyzes product release. J Biol Chem (2003) 0.86
Fluorescence of dietary porphyrins as a basis for real-time detection of fecal contamination on meat. J Agric Food Chem (2003) 0.86
Ester carbonyl vibration as a sensitive probe of protein local electric field. Angew Chem Int Ed Engl (2014) 0.85
Characterization of the cofactor-induced folding mechanism of a zinc-binding peptide using computationally designed mutants. J Mol Biol (2009) 0.85
Fluorescence correlation spectroscopic study of serpin depolymerization by computationally designed peptides. J Mol Biol (2007) 0.85
p-Cyanophenylalanine and selenomethionine constitute a useful fluorophore-quencher pair for short distance measurements: application to polyproline peptides. Phys Chem Chem Phys (2015) 0.84
Heterogeneous and anomalous diffusion inside lipid tubules. J Phys Chem B (2007) 0.84
Heterogeneous diffusion of a membrane-bound pHLIP peptide. Biophys J (2010) 0.83
Fluorescence correlation spectroscopy measurements of the membrane protein TetA in Escherichia coli suggest rapid diffusion at short length scales. PLoS One (2012) 0.82
Truncation of a cross-linked GCN4-p1 coiled coil leads to ultrafast folding. Biochemistry (2006) 0.82
Light-triggered disassembly of amyloid fibrils. Langmuir (2012) 0.82
Using D-Amino Acids to Delineate the Mechanism of Protein Folding: Application to Trp-cage. Chem Phys (2013) 0.82
The effect of charge-charge interactions on the kinetics of alpha-helix formation. Biophys J (2007) 0.81
Quenching of p-Cyanophenylalanine Fluorescence by Various Anions. Chem Phys Lett (2013) 0.81
The leghemoglobin proximal heme pocket directs oxygen dissociation and stabilizes bound heme. Proteins (2002) 0.81
Probing the folding intermediate of Rd-apocyt b562 by protein engineering and infrared T-jump. Protein Sci (2007) 0.81
Assessment of local friction in protein folding dynamics using a helix cross-linker. J Phys Chem B (2013) 0.81
Photoinduced electron transfer and fluorophore motion as a probe of the conformational dynamics of membrane proteins: application to the influenza a M2 proton channel. Langmuir (2011) 0.81
Using VIPT-jump to distinguish between different folding mechanisms: application to BBL and a Trpzip. J Am Chem Soc (2013) 0.81
Probing the kinetic cooperativity of beta-sheet folding perpendicular to the strand direction. Biochemistry (2008) 0.80
Diffusion as a probe of the heterogeneity of antimicrobial peptide-membrane interactions. Biochemistry (2010) 0.80
Slow and bimolecular folding of a de novo designed monomeric protein DS119. Biophys J (2013) 0.79
Tuning the Attempt Frequency of Protein Folding Dynamics via Transition-State Rigidification: Application to Trp-Cage. J Phys Chem Lett (2015) 0.79
Infrared study of the folding mechanism of a helical hairpin: porcine PYY. Biochemistry (2010) 0.78
Experimental validation of the role of trifluoroethanol as a nanocrowder. J Phys Chem B (2014) 0.78
2D IR spectroscopy of histidine: probing side-chain structure and dynamics via backbone amide vibrations. J Phys Chem B (2014) 0.78
Power-law dependence of the melting temperature of ubiquitin on the volume fraction of macromolecular crowders. J Chem Phys (2011) 0.78
How quickly can a β-hairpin fold from its transition state? J Phys Chem B (2014) 0.78
Amide I Band and Photoinduced Disassembly of a Peptide Hydrogel. Chem Phys Lett (2013) 0.76
Probing the role of hydration in the unfolding transitions of carbonmonoxy myoglobin and apomyoglobin. J Phys Chem B (2009) 0.75
Slow folding-unfolding kinetics of an octameric β-peptide bundle. ACS Chem Biol (2013) 0.75
Simple method to enhance the photostability of the fluorescence reporter R6G for prolonged single-molecule studies. J Phys Chem A (2013) 0.75
Kinetic Isotope Effect Provides Insight into the Vibrational Relaxation Mechanism of Aromatic Molecules: Application to Cyano-phenylalanine. J Phys Chem Lett (2016) 0.75
Diffusion as a probe of peptide-induced membrane domain formation. Biochemistry (2011) 0.75
Aggregation gatekeeper and controlled assembly of Trpzip β-hairpins. Biochemistry (2014) 0.75
Direct measurement of the tryptophan-mediated photocleavage kinetics of a protein disulfide bond. Phys Chem Chem Phys (2016) 0.75