Bioinformatic analysis of the CLE signaling peptide family.

PubWeight™: 1.66‹?› | Rank: Top 3%

🔗 View Article (PMC 2254619)

Published in BMC Plant Biol on January 03, 2008

Authors

Karsten Oelkers1, Nicolas Goffard, Georg F Weiller, Peter M Gresshoff, Ulrike Mathesius, Tancred Frickey

Author Affiliations

1: School of Biochemistry and Molecular Biology, The Australian National University, Canberra, ACT, Australia. karsten.oelkers@anu.edu.au

Articles citing this

CLE peptides control Medicago truncatula nodulation locally and systemically. Plant Physiol (2010) 1.52

Small signaling peptides in Arabidopsis development: how cells communicate over a short distance. Plant Cell (2012) 1.38

Peptide signaling in plant development. Curr Biol (2011) 1.30

Molecular mechanisms controlling legume autoregulation of nodulation. Ann Bot (2011) 1.29

CLAVATA2 forms a distinct CLE-binding receptor complex regulating Arabidopsis stem cell specification. Plant J (2010) 1.27

Validation of reference genes for quantitative expression analysis by real-time rt-PCR in four lepidopteran insects. J Insect Sci (2012) 1.23

CLE peptide signaling during plant development. Protoplasma (2009) 1.15

Plant vascular cell division is maintained by an interaction between PXY and ethylene signalling. PLoS Genet (2012) 1.14

CLE-CLAVATA1 peptide-receptor signaling module regulates the expansion of plant root systems in a nitrogen-dependent manner. Proc Natl Acad Sci U S A (2014) 1.13

Plant meristems: CLAVATA3/ESR-related signaling in the shoot apical meristem and the root apical meristem. J Plant Res (2008) 1.10

Discovery and annotation of small proteins using genomics, proteomics, and computational approaches. Genome Res (2011) 1.06

Validation of reference genes for expression analysis by quantitative real-time PCR in Leptinotarsa decemlineata (Say). BMC Res Notes (2013) 1.04

Spatiotemporal signalling in plant development. Nat Rev Genet (2013) 0.98

Antagonistic peptide technology for functional dissection of CLV3/ESR genes in Arabidopsis. Plant Physiol (2013) 0.97

The Function of the CLE Peptides in Plant Development and Plant-Microbe Interactions. Arabidopsis Book (2011) 0.96

Genetic analysis of ethylene regulation of legume nodulation. Plant Signal Behav (2009) 0.95

Evolution of CLE signaling: origins of the CLV1 and SOL2/CRN receptor diversity. Plant Signal Behav (2009) 0.95

Mechanisms of molecular mimicry of plant CLE peptide ligands by the parasitic nematode Globodera rostochiensis. Plant Physiol (2011) 0.94

Structure-function analysis of the GmRIC1 signal peptide and CLE domain required for nodulation control in soybean. J Exp Bot (2013) 0.92

The association of homeobox gene expression with stem cell formation and morphogenesis in cultured Medicago truncatula. Planta (2009) 0.91

CLE14/CLE20 peptides may interact with CLAVATA2/CORYNE receptor-like kinases to irreversibly inhibit cell division in the root meristem of Arabidopsis. Planta (2010) 0.91

Novel MtCEP1 peptides produced in vivo differentially regulate root development in Medicago truncatula. J Exp Bot (2015) 0.91

The Plant Peptidome: An Expanding Repertoire of Structural Features and Biological Functions. Plant Cell (2015) 0.88

Border sequences of Medicago truncatula CLE36 are specifically cleaved by endoproteases common to the extracellular fluids of Medicago and soybean. J Exp Bot (2011) 0.88

Diversification of the C-TERMINALLY ENCODED PEPTIDE (CEP) gene family in angiosperms, and evolution of plant-family specific CEP genes. BMC Genomics (2014) 0.86

Expanding the repertoire of secretory peptides controlling root development with comparative genome analysis and functional assays. J Exp Bot (2015) 0.86

CLE19 expressed in the embryo regulates both cotyledon establishment and endosperm development in Arabidopsis. J Exp Bot (2015) 0.86

Information processing without brains--the power of intercellular regulators in plants. Development (2010) 0.85

Bioinformatic and phylogenetic analysis of the CLAVATA3/EMBRYO-SURROUNDING REGION (CLE) and the CLE-LIKE signal peptide genes in the Pinophyta. BMC Plant Biol (2014) 0.85

Thousands of novel translated open reading frames in humans inferred by ribosome footprint profiling. Elife (2016) 0.83

Analogs of the CLV3 peptide: synthesis and structure-activity relationships focused on proline residues. Plant Cell Physiol (2010) 0.83

Long-distance transport of signals during symbiosis: are nodule formation and mycorrhization autoregulated in a similar way? Plant Signal Behav (2011) 0.82

Comparison of the nodule vs. root transcriptome of the actinorhizal plant Datisca glomerata: actinorhizal nodules contain a specific class of defensins. PLoS One (2013) 0.82

Crystal structure of the plant receptor-like kinase TDR in complex with the TDIF peptide. Nat Commun (2016) 0.82

Genome-wide annotation and characterization of CLAVATA/ESR (CLE) peptide hormones of soybean (Glycine max) and common bean (Phaseolus vulgaris), and their orthologues of Arabidopsis thaliana. J Exp Bot (2015) 0.80

A Role of TDIF Peptide Signaling in Vascular Cell Differentiation is Conserved Among Euphyllophytes. Front Plant Sci (2015) 0.80

Peptides and receptors controlling root development. Philos Trans R Soc Lond B Biol Sci (2012) 0.79

Genome-wide characterization, expression and functional analysis of CLV3/ESR gene family in tomato. BMC Genomics (2014) 0.78

Small proteins: untapped area of potential biological importance. Front Genet (2013) 0.78

Spatial expression of CLAVATA3 in the shoot apical meristem suggests it is not a stem cell marker in soybean. J Exp Bot (2013) 0.78

Sequence and Spatiotemporal Expression Analysis of CLE-Motif Containing Genes from the Reniform Nematode (Rotylenchulus reniformis Linford & Oliveira). J Nematol (2015) 0.78

The sequence flanking the N-terminus of the CLV3 peptide is critical for its cleavage and activity in stem cell regulation in Arabidopsis. BMC Plant Biol (2013) 0.78

RPK2 functions in diverged CLE signaling. Plant Signal Behav (2011) 0.77

Methodologies for in vitro cloning of small RNAs and application for plant genome(s). Int J Plant Genomics (2009) 0.77

Biologically active and antimicrobial peptides from plants. Biomed Res Int (2015) 0.77

In planta processing and glycosylation of a nematode CLAVATA3/ENDOSPERM SURROUNDING REGION-like effector and its interaction with a host CLAVATA2-like receptor to promote parasitism. Plant Physiol (2014) 0.77

Identification and characterization of the Populus trichocarpa CLE family. BMC Genomics (2016) 0.76

Homo-dimerization and ligand binding by the leucine-rich repeat domain at RHG1/RFS2 underlying resistance to two soybean pathogens. BMC Plant Biol (2013) 0.76

Classification of EA1-box proteins and new insights into their role during reproduction in grasses. Plant Reprod (2015) 0.76

Orientation of vascular cell divisions in Arabidopsis. Plant Signal Behav (2010) 0.76

A Comprehensive Analysis of RALF Proteins in Green Plants Suggests There Are Two Distinct Functional Groups. Front Plant Sci (2017) 0.75

The CLE gene family in Populus trichocarpa. Plant Signal Behav (2016) 0.75

Cryptic bioactivity capacitated by synthetic hybrid plant peptides. Nat Commun (2017) 0.75

Identification, expression, and functional analysis of CLE genes in radish (Raphanus sativus L.) storage root. BMC Plant Biol (2016) 0.75

The vascular cambium: molecular control of cellular structure. Protoplasma (2010) 0.75

Articles cited by this

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res (1997) 665.31

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res (1994) 392.47

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature (2000) 70.33

EMBOSS: the European Molecular Biology Open Software Suite. Trends Genet (2000) 69.26

WebLogo: a sequence logo generator. Genome Res (2004) 59.58

Profile hidden Markov models. Bioinformatics (1998) 56.04

Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics (2006) 43.68

Multiple sequence alignment with hierarchical clustering. Nucleic Acids Res (1988) 32.89

The genome of black cottonwood, Populus trichocarpa (Torr. & Gray). Science (2006) 21.03

ExPASy: The proteomics server for in-depth protein knowledge and analysis. Nucleic Acids Res (2003) 17.39

The infection of clover root hairs by nodule bacteria studied by a simple glass slide technique. J Gen Microbiol (1957) 11.37

Kalign--an accurate and fast multiple sequence alignment algorithm. BMC Bioinformatics (2005) 7.01

Dependence of stem cell fate in Arabidopsis on a feedback loop regulated by CLV3 activity. Science (2000) 6.05

The male determinant of self-incompatibility in Brassica. Science (1999) 5.03

Genome-wide reprogramming of primary and secondary metabolism, protein synthesis, cellular growth processes, and the regulatory infrastructure of Arabidopsis in response to nitrogen. Plant Physiol (2004) 4.99

A structural basis of the interactions between leucine-rich repeats and protein ligands. Nature (1995) 4.70

A receptor kinase gene regulating symbiotic nodule development. Nature (2002) 4.44

A plant receptor-like kinase required for both bacterial and fungal symbiosis. Nature (2002) 4.29

CLANS: a Java application for visualizing protein families based on pairwise similarity. Bioinformatics (2004) 4.14

A plant peptide encoded by CLV3 identified by in situ MALDI-TOF MS analysis. Science (2006) 3.84

The TIGR Gene Indices: clustering and assembling EST and known genes and integration with eukaryotic genomes. Nucleic Acids Res (2005) 3.53

Dodeca-CLE peptides as suppressors of plant stem cell differentiation. Science (2006) 3.37

Shoot control of root development and nodulation is mediated by a receptor-like kinase. Nature (2002) 3.04

HAR1 mediates systemic regulation of symbiotic organ development. Nature (2002) 3.01

Long-distance signaling in nodulation directed by a CLAVATA1-like receptor kinase. Science (2002) 2.99

A large family of genes that share homology with CLAVATA3. Plant Physiol (2001) 2.84

The TIGR Plant Transcript Assemblies database. Nucleic Acids Res (2006) 2.62

Genome organization of more than 300 defensin-like genes in Arabidopsis. Plant Physiol (2005) 2.54

CLV3 is localized to the extracellular space, where it activates the Arabidopsis CLAVATA stem cell signaling pathway. Plant Cell (2002) 2.52

Root-specific CLE19 overexpression and the sol1/2 suppressors implicate a CLV-like pathway in the control of Arabidopsis root meristem maintenance. Curr Biol (2003) 2.38

The 14-amino acid CLV3, CLE19, and CLE40 peptides trigger consumption of the root meristem in Arabidopsis through a CLAVATA2-dependent pathway. Plant Cell (2005) 2.36

The Medicago truncatula SUNN gene encodes a CLV1-like leucine-rich repeat receptor kinase that regulates nodule number and root length. Plant Mol Biol (2005) 2.12

The Arabidopsis CLV3-like (CLE) genes are expressed in diverse tissues and encode secreted proteins. Plant Mol Biol (2003) 1.94

Leucine-rich repeat receptor kinases in plants: structure, function, and signal transduction pathways. Int Rev Cytol (2004) 1.85

Evidence for functional conservation, sufficiency, and proteolytic processing of the CLAVATA3 CLE domain. Plant Physiol (2006) 1.85

Receptor kinase signaling in plant development. Annu Rev Cell Dev Biol (2002) 1.78

The Arabidopsis unannotated secreted peptide database, a resource for plant peptidomics. Plant Physiol (2006) 1.77

Gain-of-function phenotypes of many CLAVATA3/ESR genes, including four new family members, correlate with tandem variations in the conserved CLAVATA3/ESR domain. Plant Physiol (2006) 1.77

Silencing the flavonoid pathway in Medicago truncatula inhibits root nodule formation and prevents auxin transport regulation by rhizobia. Plant Cell (2006) 1.76

Cell signalling at the shoot meristem. Nat Rev Mol Cell Biol (2001) 1.74

Loss of CLE40, a protein functionally equivalent to the stem cell restricting signal CLV3, enhances root waving in Arabidopsis. Dev Genes Evol (2003) 1.73

A parasitism gene from a plant-parasitic nematode with function similar to CLAVATA3/ESR (CLE) of Arabidopsis thaliana. Mol Plant Pathol (2005) 1.62

Chlamydomonas reinhardtii genome project. A guide to the generation and use of the cDNA information. Plant Physiol (2003) 1.53

ZmEsr, a novel endosperm-specific gene expressed in a restricted region around the maize embryo. Plant J (1997) 1.46

Mis-expression of the CLV3/ESR-like gene CLE19 in Arabidopsis leads to a consumption of root meristem. Gene (2004) 1.46

The Medicago Genome Initiative: a model legume database. Nucleic Acids Res (2001) 1.33

The floral organ number4 gene encoding a putative ortholog of Arabidopsis CLAVATA3 regulates apical meristem size in rice. Plant Physiol (2006) 1.31

SrSymRK, a plant receptor essential for symbiosome formation. Proc Natl Acad Sci U S A (2005) 1.28

Two large Arabidopsis thaliana gene families are homologous to the Brassica gene superfamily that encodes pollen coat proteins and the male component of the self-incompatibility response. Plant Mol Biol (2001) 1.19

Sending the right signals: regulating receptor kinase activity. Curr Opin Plant Biol (2005) 1.18

An artificial intelligence approach to motif discovery in protein sequences: application to steriod dehydrogenases. J Steroid Biochem Mol Biol (1997) 1.16

CLE peptide ligands and their roles in establishing meristems. Curr Opin Plant Biol (2006) 1.03

Nematodes. Sophisticated parasites of legumes. Plant Physiol (2005) 1.01

CLV3/ESR-related (CLE) peptides as intercellular signaling molecules in plants. Chem Rec (2006) 1.01

Ligand mimicry? Plant-parasitic nematode polypeptide with similarity to CLAVATA3. Trends Plant Sci (2003) 0.99

Esr genes show different levels of expression in the same region of maize endosperm. Gene (2000) 0.98

Peptide signals and their receptors in higher plants. Trends Plant Sci (2001) 0.95

Analysis of Arabidopsis genome sequence reveals a large new gene family in plants. Plant Mol Biol (1999) 0.87

Articles by these authors

Genome evolution in yeasts. Nature (2004) 10.50

Genome duplication, a trait shared by 22000 species of ray-finned fish. Genome Res (2003) 4.19

A gene expression atlas of the model legume Medicago truncatula. Plant J (2008) 3.38

Long-distance signaling in nodulation directed by a CLAVATA1-like receptor kinase. Science (2002) 2.99

WIPI-1alpha (WIPI49), a member of the novel 7-bladed WIPI protein family, is aberrantly expressed in human cancer and is linked to starvation-induced autophagy. Oncogene (2004) 2.86

AliasServer: a web server to handle multiple aliases used to refer to proteins. Bioinformatics (2004) 2.45

Molecular analysis of legume nodule development and autoregulation. J Integr Plant Biol (2010) 2.00

Development and independent validation of a prognostic assay for stage II colon cancer using formalin-fixed paraffin-embedded tissue. J Clin Oncol (2011) 1.84

Silencing the flavonoid pathway in Medicago truncatula inhibits root nodule formation and prevents auxin transport regulation by rhizobia. Plant Cell (2006) 1.76

Agrobacterium rhizogenes-mediated transformation of soybean to study root biology. Nat Protoc (2007) 1.64

Classification of AAA+ proteins. J Struct Biol (2006) 1.55

Inoculation- and nitrate-induced CLE peptides of soybean control NARK-dependent nodule formation. Mol Plant Microbe Interact (2011) 1.47

The role of flavonoids in root-rhizosphere signalling: opportunities and challenges for improving plant-microbe interactions. J Exp Bot (2012) 1.46

AbrB-like transcription factors assume a swapped hairpin fold that is evolutionarily related to double-psi beta barrels. Structure (2005) 1.45

A global analysis of protein expression profiles in Sinorhizobium meliloti: discovery of new genes for nodule occupancy and stress adaptation. Mol Plant Microbe Interact (2003) 1.45

Defective long-distance auxin transport regulation in the Medicago truncatula super numeric nodules mutant. Plant Physiol (2006) 1.42

Common regulatory themes in meristem development and whole-plant homeostasis. Curr Opin Plant Biol (2006) 1.39

Proteome reference maps of the Lotus japonicus nodule and root. Proteomics (2014) 1.39

Dissection of symbiosis and organ development by integrated transcriptome analysis of lotus japonicus mutant and wild-type plants. PLoS One (2009) 1.38

MtCRE1-dependent cytokinin signaling integrates bacterial and plant cues to coordinate symbiotic nodule organogenesis in Medicago truncatula. Plant J (2011) 1.35

Plant responses to bacterial quorum sensing signals. Curr Opin Plant Biol (2004) 1.32

Molecular mechanisms controlling legume autoregulation of nodulation. Ann Bot (2011) 1.29

Perception and degradation of N-acyl homoserine lactone quorum sensing signals by mammalian and plant cells. Chem Rev (2010) 1.28

Dealing with saturation at the amino acid level: a case study based on anciently duplicated zebrafish genes. Gene (2002) 1.22

Age-related differences in plasma proteins: how plasma proteins change from neonates to adults. PLoS One (2011) 1.22

Genetics of symbiosis in Lotus japonicus: recombinant inbred lines, comparative genetic maps, and map position of 35 symbiotic loci. Mol Plant Microbe Interact (2006) 1.21

Flavonoids: their structure, biosynthesis and role in the rhizosphere, including allelopathy. J Chem Ecol (2013) 1.18

Microarray analysis reveals transcriptional plasticity in the reef building coral Acropora millepora. Mol Ecol (2009) 1.17

Silver staining DNA in polyacrylamide gels. Nat Protoc (2007) 1.15

The Ethylene-insensitive sickle mutant of Medicago truncatula shows altered auxin transport regulation during nodulation. Plant Physiol (2006) 1.13

Overlap of proteome changes in Medicago truncatula in response to auxin and Sinorhizobium meliloti. Plant Physiol (2007) 1.10

New strategy for the representation and the integration of biomolecular knowledge at a cellular scale. Nucleic Acids Res (2004) 1.09

Molecular phylogeny and historical biogeography of the Aphanius (Pisces, Cyprinodontiformes) species complex of central Anatolia, Turkey. Mol Phylogenet Evol (2002) 1.08

Suppression of hypernodulation in soybean by a leaf-extracted, NARK- and Nod factor-dependent, low molecular mass fraction. New Phytol (2010) 1.08

The glycine max xylem sap and apoplast proteome. J Proteome Res (2007) 1.07

Global changes in the transcript and metabolic profiles during symbiotic nitrogen fixation in phosphorus-stressed common bean plants. Plant Physiol (2009) 1.05

Fast, efficient and reproducible genetic transformation of Phaseolus spp. by Agrobacterium rhizogenes. Nat Protoc (2007) 1.05

Asparagine as a major factor in the N-feedback regulation of N2 fixation in Medicago truncatula. Physiol Plant (2010) 1.05

Transcriptional profiling of Medicago truncatula meristematic root cells. BMC Plant Biol (2008) 1.04

Soybean nodule autoregulation receptor kinase phosphorylates two kinase-associated protein phosphatases in vitro. J Biol Chem (2008) 1.04

Promoters of orthologous Glycine max and Lotus japonicus nodulation autoregulation genes interchangeably drive phloem-specific expression in transgenic plants. Mol Plant Microbe Interact (2007) 1.04

Inactivation of duplicated nod factor receptor 5 (NFR5) genes in recessive loss-of-function non-nodulation mutants of allotetraploid soybean (Glycine max L. Merr.). Plant Cell Physiol (2009) 1.03

Manipulation of auxin transport in plant roots during Rhizobium symbiosis and nematode parasitism. Plant Cell (2009) 1.03

Members of the Dof transcription factor family in Triticum aestivum are associated with light-mediated gene regulation. Funct Integr Genomics (2009) 1.03

Nodulation factor receptor kinase 1α controls nodule organ number in soybean (Glycine max L. Merr). Plant J (2010) 1.02

Transient Nod factor-dependent gene expression in the nodulation-competent zone of soybean (Glycine max [L.] Merr.) roots. Plant Biotechnol J (2012) 1.02

Genomic expression profiling of mature soybean (Glycine max) pollen. BMC Plant Biol (2009) 1.00

Genome-wide transcriptional analysis of super-embryogenic Medicago truncatula explant cultures. BMC Plant Biol (2008) 1.00

Molecular analysis of the pathway for the synthesis of thiol tripeptides in the model legume Lotus japonicus. Mol Plant Microbe Interact (2003) 1.00

An efficient petiole-feeding bioassay for introducing aqueous solutions into dicotyledonous plants. Nat Protoc (2010) 1.00

Capturing the biofuel wellhead and powerhouse: the chloroplast and mitochondrial genomes of the leguminous feedstock tree Pongamia pinnata. PLoS One (2012) 0.98

Rab14 is part of the early endosomal clathrin-coated TGN microdomain. FEBS Lett (2006) 0.98

Phytohormone regulation of legume-rhizobia interactions. J Chem Ecol (2014) 0.98

Investigation of downstream signals of the soybean autoregulation of nodulation receptor kinase GmNARK. Mol Plant Microbe Interact (2008) 0.96

In Silico identification and characterization of mRNA-like noncoding transcripts in Medicago truncatula. In Silico Biol (2007) 0.96

Improving Hox protein classification across the major model organisms. PLoS One (2010) 0.96

The Q-type C2H2 zinc finger subfamily of transcription factors in Triticum aestivum is predominantly expressed in roots and enriched with members containing an EAR repressor motif and responsive to drought stress. Plant Mol Biol (2008) 0.95

Proteome reference maps of Medicago truncatula embryogenic cell cultures generated from single protoplasts. Proteomics (2004) 0.94

The proteome of seed development in the model legume Lotus japonicus. Plant Physiol (2009) 0.94

Structure-function analysis of the GmRIC1 signal peptide and CLE domain required for nodulation control in soybean. J Exp Bot (2013) 0.92

PathExpress update: the enzyme neighbourhood method of associating gene-expression data with metabolic pathways. Nucleic Acids Res (2009) 0.92

Ethylene insensitivity conferred by a mutated Arabidopsis ethylene receptor gene alters nodulation in transgenic Lotus japonicus. Ann Bot (2009) 0.92

pGFPGUSPlus, a new binary vector for gene expression studies and optimising transformation systems in plants. Biotechnol Lett (2007) 0.91

Systemic regulation of soybean nodulation by acidic growth conditions. Plant Physiol (2012) 0.91

A functional genomics approach to dissect the mode of action of the Stagonospora nodorum effector protein SnToxA in wheat. Mol Plant Pathol (2011) 0.90

The compact root architecture1 gene regulates lignification, flavonoid production, and polar auxin transport in Medicago truncatula. Plant Physiol (2010) 0.89

Autoregulation of nodulation (AON) in Pisum sativum (pea) involves signalling events associated with both nodule primordia development and nitrogen fixation. J Plant Physiol (2009) 0.88

A novel ABA insensitive mutant of Lotus japonicus with a wilty phenotype displays unaltered nodulation regulation. Mol Plant (2009) 0.88

Computational analyses show A-to-G mutations correlate with nascent mRNA hairpins at somatic hypermutation hotspots. DNA Repair (Amst) (2006) 0.88

The autoregulation gene SUNN mediates changes in root organ formation in response to nitrogen through alteration of shoot-to-root auxin transport. Plant Physiol (2012) 0.88

Role of LONELY GUY genes in indeterminate nodulation on Medicago truncatula. New Phytol (2014) 0.87

Molecular analysis of lipoxygenases associated with nodule development in soybean. Mol Plant Microbe Interact (2008) 0.87

Computational prediction of candidate miRNAs and their targets from Medicago truncatula non-protein-coding transcripts. In Silico Biol (2008) 0.87

Computational complementation: a modelling approach to study signalling mechanisms during legume autoregulation of nodulation. PLoS Comput Biol (2010) 0.86

Differing requirements for flavonoids during the formation of lateral roots, nodules and root knot nematode galls in Medicago truncatula. New Phytol (2009) 0.86

Mechanistic action of gibberellins in legume nodulation. J Integr Plant Biol (2014) 0.86

Identification of systemic responses in soybean nodulation by xylem sap feeding and complete transcriptome sequencing reveal a novel component of the autoregulation pathway. Plant Biotechnol J (2012) 0.86

Comparative proteomics of high light stress in the model alga Chlamydomonas reinhardtii. Proteomics (2006) 0.86

pHairyRed: a novel binary vector containing the DsRed2 reporter gene for visual selection of transgenic hairy roots. Mol Plant (2011) 0.86

Phylogenetic analyses suggest lateral gene transfer from the mitochondrion to the apicoplast. Gene (2002) 0.85

Summer dormancy and winter growth: root survival strategy in a perennial monocotyledon. New Phytol (2009) 0.85

A novel cis-acting element, ESP, contributes to high-level endosperm-specific expression in an oat globulin promoter. Plant Mol Biol (2006) 0.85

The impact of beneficial plant-associated microbes on plant phenotypic plasticity. J Chem Ecol (2013) 0.84

A functional-structural modelling approach to autoregulation of nodulation. Ann Bot (2010) 0.83

Role of the Arabidopsis PIN6 auxin transporter in auxin homeostasis and auxin-mediated development. PLoS One (2013) 0.83

Bisquinolinium compounds induce quadruplex-specific transcriptome changes in HeLa S3 cell lines. BMC Res Notes (2012) 0.82

Agrobacterium rhizogenes transformation of the Phaseolus spp.: a tool for functional genomics. Mol Plant Microbe Interact (2006) 0.82

The REDUCED LEAFLET genes encode key components of the trans-acting small interfering RNA pathway and regulate compound leaf and flower development in Lotus japonicus. Plant Physiol (2009) 0.82

Nodulation deficiency caused by fast neutron mutagenesis of the model legume Lotus japonicus. J Plant Physiol (2007) 0.81

microRNA profiling of root tissues and root forming explant cultures in Medicago truncatula. Planta (2013) 0.81

Proteome analysis of pod and seed development in the model legume Lotus japonicus. J Proteome Res (2010) 0.81

Seed shape in model legumes: approximation by a cardioid reveals differences in ethylene insensitive mutants of Lotus japonicus and Medicago truncatula. J Plant Physiol (2012) 0.81

Rhizobial and mycorrhizal symbioses in Lotus japonicus require lectin nucleotide phosphohydrolase, which acts upstream of calcium signaling. Plant Physiol (2012) 0.81

Identification of ethylene-mediated protein changes during nodulation in Medicago truncatula using proteome analysis. J Proteome Res (2006) 0.80