Published in Nat Protoc on January 01, 2008
BIN1 localizes the L-type calcium channel to cardiac T-tubules. PLoS Biol (2010) 2.34
Rab10 GTPase regulates ER dynamics and morphology. Nat Cell Biol (2012) 2.29
BioImageXD: an open, general-purpose and high-throughput image-processing platform. Nat Methods (2012) 2.22
ER contact sites define the position and timing of endosome fission. Cell (2014) 1.92
KDM2A represses transcription of centromeric satellite repeats and maintains the heterochromatic state. Cell Cycle (2008) 1.90
Molecular basis for the sorting of the SNARE VAMP7 into endocytic clathrin-coated vesicles by the ArfGAP Hrb. Cell (2008) 1.75
Mitochondrial BCL-2 inhibits AMBRA1-induced autophagy. EMBO J (2011) 1.68
Multivesicular bodies mature from the trans-Golgi network/early endosome in Arabidopsis. Plant Cell (2011) 1.47
Arabidopsis thaliana high-affinity phosphate transporters exhibit multiple levels of posttranslational regulation. Plant Cell (2011) 1.34
Trafficking of hepatitis C virus core protein during virus particle assembly. PLoS Pathog (2011) 1.32
CellSeT: novel software to extract and analyze structured networks of plant cells from confocal images. Plant Cell (2012) 1.26
Multiscale systems analysis of root growth and development: modeling beyond the network and cellular scales. Plant Cell (2012) 1.25
Coordinate-based colocalization analysis of single-molecule localization microscopy data. Histochem Cell Biol (2011) 1.23
Ubiad1 is an antioxidant enzyme that regulates eNOS activity by CoQ10 synthesis. Cell (2013) 1.21
Loss of αT-catenin alters the hybrid adhering junctions in the heart and leads to dilated cardiomyopathy and ventricular arrhythmia following acute ischemia. J Cell Sci (2012) 1.16
Quantifying spatial correlations of fluorescent markers using enhanced background reduction with protein proximity index and correlation coefficient estimations. Nat Protoc (2011) 1.14
Human primary gastric dendritic cells induce a Th1 response to H. pylori. Mucosal Immunol (2010) 1.10
A recycling-defective vacuolar sorting receptor reveals an intermediate compartment situated between prevacuoles and vacuoles in tobacco. Plant Cell (2010) 1.09
C2-domain abscisic acid-related proteins mediate the interaction of PYR/PYL/RCAR abscisic acid receptors with the plasma membrane and regulate abscisic acid sensitivity in Arabidopsis. Plant Cell (2014) 1.05
Mitochondrial translocation of oxidized cofilin induces caspase-independent necrotic-like programmed cell death of T cells. Cell Death Dis (2010) 1.05
Arabidopsis μ-adaptin subunit AP1M of adaptor protein complex 1 mediates late secretory and vacuolar traffic and is required for growth. Proc Natl Acad Sci U S A (2013) 1.04
Hepatitis C virus co-opts Ras-GTPase-activating protein-binding protein 1 for its genome replication. J Virol (2011) 1.03
A DNAzyme-gold nanoparticle probe for uranyl ion in living cells. J Am Chem Soc (2013) 1.03
Vacuolar transport in tobacco leaf epidermis cells involves a single route for soluble cargo and multiple routes for membrane cargo. Plant Cell (2011) 1.02
Static retention of the lumenal monotopic membrane protein torsinA in the endoplasmic reticulum. EMBO J (2011) 1.00
Protein S-ACYL Transferase10 is critical for development and salt tolerance in Arabidopsis. Plant Cell (2013) 1.00
GABAA receptor trafficking is regulated by protein kinase C(epsilon) and the N-ethylmaleimide-sensitive factor. J Neurosci (2010) 0.99
Double-strand break-induced transcriptional silencing is associated with loss of tri-methylation at H3K4. Chromosome Res (2011) 0.98
In vitro selection of a sodium-specific DNAzyme and its application in intracellular sensing. Proc Natl Acad Sci U S A (2015) 0.98
Adaptor protein complex 2-mediated endocytosis is crucial for male reproductive organ development in Arabidopsis. Plant Cell (2013) 0.97
Targeting mitochondrial DNA with a platinum-based anticancer agent. Chem Biol (2013) 0.97
The endocytosis of cellulose synthase in Arabidopsis is dependent on μ2, a clathrin-mediated endocytosis adaptin. Plant Physiol (2013) 0.95
TOR complex 2-Ypk1 signaling maintains sphingolipid homeostasis by sensing and regulating ROS accumulation. Cell Rep (2014) 0.94
Tudor staphylococcal nuclease links formation of stress granules and processing bodies with mRNA catabolism in Arabidopsis. Plant Cell (2015) 0.94
Dual regulation of hepatitis C viral RNA by cellular RNAi requires partitioning of Ago2 to lipid droplets and P-bodies. RNA (2011) 0.94
Viral membrane fusion and nucleocapsid delivery into the cytoplasm are distinct events in some flaviviruses. PLoS Pathog (2013) 0.92
An actin filament population defined by the tropomyosin Tpm3.1 regulates glucose uptake. Traffic (2015) 0.91
FIMBRIN1 is involved in lily pollen tube growth by stabilizing the actin fringe. Plant Cell (2012) 0.90
Ubiquitin initiates sorting of Golgi and plasma membrane proteins into the vacuolar degradation pathway. BMC Plant Biol (2012) 0.89
Nuclear retention of IL-1 alpha by necrotic cells: a mechanism to dampen sterile inflammation. Eur J Immunol (2009) 0.89
Involvement of formyl peptide receptors in receptor for advanced glycation end products (RAGE)--and amyloid beta 1-42-induced signal transduction in glial cells. Mol Neurodegener (2012) 0.89
The Arabidopsis Endosomal Sorting Complex Required for Transport III Regulates Internal Vesicle Formation of the Prevacuolar Compartment and Is Required for Plant Development. Plant Physiol (2014) 0.88
Chromatin composition is changed by poly(ADP-ribosyl)ation during chromatin immunoprecipitation. PLoS One (2012) 0.87
Intravital placenta imaging reveals microcirculatory dynamics impact on sequestration and phagocytosis of Plasmodium-infected erythrocytes. PLoS Pathog (2013) 0.87
Peptide-based Targeting of Fluorescent Zinc Sensors to the Plasma Membrane of Live Cells. Chem Sci (2013) 0.87
GLUTELIN PRECURSOR ACCUMULATION3 encodes a regulator of post-Golgi vesicular traffic essential for vacuolar protein sorting in rice endosperm. Plant Cell (2014) 0.85
Golgi-dependent transport of vacuolar sorting receptors is regulated by COPII, AP1, and AP4 protein complexes in tobacco. Plant Cell (2014) 0.85
Current approaches on viral infection: proteomics and functional validations. Front Microbiol (2012) 0.85
Flavivirus replication complex assembly revealed by DNAJC14 functional mapping. J Virol (2012) 0.85
The caspase-related protease separase (extra spindle poles) regulates cell polarity and cytokinesis in Arabidopsis. Plant Cell (2013) 0.85
A proteomic survey of widespread protein aggregation in yeast. Mol Biosyst (2014) 0.85
Vps33b pathogenic mutations preferentially affect VIPAS39/SPE-39-positive endosomes. Hum Mol Genet (2013) 0.84
Trans-Golgi network-located AP1 gamma adaptins mediate dileucine motif-directed vacuolar targeting in Arabidopsis. Plant Cell (2014) 0.84
Hyperoxia induces alveolar epithelial-to-mesenchymal cell transition. Am J Physiol Lung Cell Mol Physiol (2013) 0.83
The p85 regulatory subunit of PI3K mediates cAMP-PKA and insulin biological effects on MCF-7 cell growth and motility. ScientificWorldJournal (2014) 0.83
ER Import Sites and Their Relationship to ER Exit Sites: A New Model for Bidirectional ER-Golgi Transport in Higher Plants. Front Plant Sci (2012) 0.82
Exocyst-Positive Organelles and Autophagosomes Are Distinct Organelles in Plants. Plant Physiol (2015) 0.81
Regulation of ENaC biogenesis by the stress response protein SERP1. Pflugers Arch (2012) 0.81
MicroRNA 155 control of p53 activity is context dependent and mediated by Aicda and Socs1. Mol Cell Biol (2015) 0.80
Recruitment of Arf1-GDP to Golgi by Glo3p-type ArfGAPs is crucial for golgi maintenance and plant growth. Plant Physiol (2012) 0.80
The NLRP3 and NLRP1 inflammasomes are activated in Alzheimer's disease. Mol Neurodegener (2016) 0.79
Radixin assembles cAMP effectors Epac and PKA into a functional cAMP compartment: role in cAMP-dependent cell proliferation. J Biol Chem (2010) 0.79
Addition of a second binding site increases the dynamic range but alters the cellular localization of a red fluorescent probe for mobile zinc. Inorg Chem (2014) 0.79
Conserved function of the lysine-based KXD/E motif in Golgi retention for endomembrane proteins among different organisms. Mol Biol Cell (2015) 0.79
Prolonged morphine treatment alters δ opioid receptor post-internalization trafficking. Br J Pharmacol (2014) 0.79
A Distinct Pathway for Polar Exocytosis in Plant Cell Wall Formation. Plant Physiol (2016) 0.78
The Cystic Fibrosis Transmembrane Conductance Regulator (CFTR) Uses its C-Terminus to Regulate the A2B Adenosine Receptor. Sci Rep (2016) 0.78
Methods of staining and visualization of sphingolipid enriched and non-enriched plasma membrane regions of Arabidopsis thaliana with fluorescent dyes and lipid analogues. Plant Methods (2012) 0.78
BRAF activates and physically interacts with PAK to regulate cell motility. Endocr Relat Cancer (2014) 0.78
THI1, a Thiamine Thiazole Synthase, Interacts with Ca2+-Dependent Protein Kinase CPK33 and Modulates the S-Type Anion Channels and Stomatal Closure in Arabidopsis. Plant Physiol (2015) 0.78
Spatially segregated transcription and translation in cells of the endomembrane-containing bacterium Gemmata obscuriglobus. Proc Natl Acad Sci U S A (2014) 0.78
Molecular Analysis and Localization of CaARA7 a Conventional RAB5 GTPase from Characean Algae. Traffic (2015) 0.78
Unique sex chromosome systems in Ellobius: How do male XX chromosomes recombine and undergo pachytene chromatin inactivation? Sci Rep (2016) 0.78
FYVE1/FREE1 Interacts with the PYL4 ABA Receptor and Mediates its Delivery to the Vacuolar Degradation Pathway. Plant Cell (2016) 0.77
Structural Mechanism for Cargo Recognition by the Retromer Complex. Cell (2016) 0.77
Actin Interacts with Dengue Virus 2 and 4 Envelope Proteins. PLoS One (2016) 0.77
A novel curcumin analog binds to and activates TFEB in vitro and in vivo independent of MTOR inhibition. Autophagy (2016) 0.77
Identification and Comparative Analysis of CBS Domain-Containing Proteins in Soybean (Glycine max) and the Primary Function of GmCBS21 in Enhanced Tolerance to Low Nitrogen Stress. Int J Mol Sci (2016) 0.77
Differential Regulation of Clathrin and Its Adaptor Proteins during Membrane Recruitment for Endocytosis. Plant Physiol (2016) 0.76
Costimulation of IL-2 Production through CD28 Is Dependent on the Size of Its Ligand. J Immunol (2015) 0.76
Heterodimeric capping protein from Arabidopsis is a membrane-associated, actin-binding protein. Plant Physiol (2014) 0.76
Infection-specific phosphorylation of glutamyl-prolyl tRNA synthetase induces antiviral immunity. Nat Immunol (2016) 0.76
Putative p24 complexes in Arabidopsis contain members of the delta and beta subfamilies and cycle in the early secretory pathway. J Exp Bot (2013) 0.76
A Novel Retinoblastoma Protein (RB) E3 Ubiquitin Ligase (NRBE3) Promotes RB Degradation and Is Transcriptionally Regulated by E2F1 Transcription Factor. J Biol Chem (2015) 0.76
Voltage dependent anion channel is redistributed during Japanese encephalitis virus infection of insect cells. ScientificWorldJournal (2014) 0.76
Electronic and Steric Optimization of Fluorogenic Probes for Biomolecular Imaging. J Org Chem (2017) 0.75
Systematic and general method for quantifying localization in microscopy images. Biol Open (2016) 0.75
Distinct chromatin signature of histone H3 variant H3.3 in human cells. Nucleus (2014) 0.75
Phosphatidylserine Synthase Controls Cell Elongation Especially in the Uppermost Internode in Rice by Regulation of Exocytosis. PLoS One (2016) 0.75
GOLGI TRANSPORT 1B Regulates Protein Export from the Endoplasmic Reticulum in Rice Endosperm Cells. Plant Cell (2016) 0.75
The Rhodococcus equi virulence protein VapA disrupts endolysosome function and stimulates lysosome biogenesis. Microbiologyopen (2016) 0.75
Probing protein interactions in living mammalian cells on a microtubule bench. Sci Rep (2015) 0.75
The lysosomal membrane protein SCAV-3 maintains lysosome integrity and adult longevity. J Cell Biol (2016) 0.75
Homogenizing cellular tension by hepatocyte growth factor in expanding epithelial monolayer. Sci Rep (2017) 0.75
Functional polyesters enable selective siRNA delivery to lung cancer over matched normal cells. Proc Natl Acad Sci U S A (2016) 0.75
TSSC1 is novel component of the endosomal retrieval machinery. Mol Biol Cell (2016) 0.75
ATG9 regulates autophagosome progression from the endoplasmic reticulum in Arabidopsis. Proc Natl Acad Sci U S A (2017) 0.75
Involvement of voltage-dependent anion channel (VDAC) in dengue infection. Sci Rep (2016) 0.75
Confocal microscopy and image analysis indicates a region-specific relation between active caspases and cytoplasm in ejaculated and epididymal sperm. PLoS One (2012) 0.75
The auxin influx carrier LAX3 promotes lateral root emergence. Nat Cell Biol (2008) 3.69
Root gravitropism requires lateral root cap and epidermal cells for transport and response to a mobile auxin signal. Nat Cell Biol (2005) 3.61
Dissecting Arabidopsis lateral root development. Trends Plant Sci (2003) 3.52
Auxin-dependent regulation of lateral root positioning in the basal meristem of Arabidopsis. Development (2007) 3.31
Ethylene upregulates auxin biosynthesis in Arabidopsis seedlings to enhance inhibition of root cell elongation. Plant Cell (2007) 3.14
Arabidopsis lateral root development: an emerging story. Trends Plant Sci (2009) 3.08
A novel sensor to map auxin response and distribution at high spatio-temporal resolution. Nature (2012) 2.86
A novel aux/IAA28 signaling cascade activates GATA23-dependent specification of lateral root founder cell identity. Curr Biol (2010) 2.81
High-throughput quantification of root growth using a novel image-analysis tool. Plant Physiol (2009) 2.78
Changes in gene expression in Arabidopsis shoots during phosphate starvation and the potential for developing smart plants. Plant Physiol (2003) 2.73
Structure-function analysis of the presumptive Arabidopsis auxin permease AUX1. Plant Cell (2004) 2.55
Divergent evolution of duplicate genes leads to genetic incompatibilities within A. thaliana. Science (2009) 2.52
Cytokinins act directly on lateral root founder cells to inhibit root initiation. Plant Cell (2007) 2.23
Incidence and risk factors of venous thromboembolism in colorectal surgery: does laparoscopy impart an advantage? Arch Surg (2011) 2.15
Subcellular trafficking of the Arabidopsis auxin influx carrier AUX1 uses a novel pathway distinct from PIN1. Plant Cell (2006) 2.08
Auxin transport through non-hair cells sustains root-hair development. Nat Cell Biol (2008) 1.94
Auxin influx carriers stabilize phyllotactic patterning. Genes Dev (2008) 1.92
Root growth in Arabidopsis requires gibberellin/DELLA signalling in the endodermis. Nat Cell Biol (2008) 1.89
Systems analysis of auxin transport in the Arabidopsis root apex. Plant Cell (2014) 1.87
AUX/LAX genes encode a family of auxin influx transporters that perform distinct functions during Arabidopsis development. Plant Cell (2012) 1.86
Bimodular auxin response controls organogenesis in Arabidopsis. Proc Natl Acad Sci U S A (2010) 1.78
Auxin transport: a field in flux. Trends Plant Sci (2006) 1.78
Lateral root emergence: a difficult birth. J Exp Bot (2009) 1.64
Brassinosteroid perception in the epidermis controls root meristem size. Development (2011) 1.62
Gibberellin signaling in the endodermis controls Arabidopsis root meristem size. Curr Biol (2009) 1.62
RootNav: navigating images of complex root architectures. Plant Physiol (2013) 1.61
A nationwide analysis of laparoscopy in high-risk colorectal surgery patients. J Gastrointest Surg (2012) 1.54
Predictive factors of splenic injury in colorectal surgery: data from the Nationwide Inpatient Sample, 2006-2008. Arch Surg (2011) 1.47
Endodermal ABA signaling promotes lateral root quiescence during salt stress in Arabidopsis seedlings. Plant Cell (2013) 1.46
Temporal and spatial expression of a polygalacturonase during leaf and flower abscission in oilseed rape and Arabidopsis. Plant Physiol (2002) 1.45
Auxin regulates aquaporin function to facilitate lateral root emergence. Nat Cell Biol (2012) 1.44
Cell polarity signaling in Arabidopsis involves a BFA-sensitive auxin influx pathway. Curr Biol (2002) 1.41
Unraveling the evolution of auxin signaling. Plant Physiol (2010) 1.41
Comparison of outcomes of laparoscopic versus open appendectomy in adults: data from the Nationwide Inpatient Sample (NIS), 2006-2008. J Gastrointest Surg (2011) 1.41
The auxin influx carriers AUX1 and LAX3 are involved in auxin-ethylene interactions during apical hook development in Arabidopsis thaliana seedlings. Development (2010) 1.39
Does primary anastomosis with diversion have any advantages over Hartmann's procedure in acute diverticulitis?. Dig Surg (2012) 1.39
High-throughput feature counting and measurement of roots. Bioinformatics (2011) 1.38
Short-Root regulates primary, lateral, and adventitious root development in Arabidopsis. Plant Physiol (2010) 1.38
Floral organ abscission peptide IDA and its HAE/HSL2 receptors control cell separation during lateral root emergence. Proc Natl Acad Sci U S A (2013) 1.38
Colonic volvulus in the United States: trends, outcomes, and predictors of mortality. Ann Surg (2014) 1.33
Auxin influx activity is associated with Frankia infection during actinorhizal nodule formation in Casuarina glauca. Plant Physiol (2007) 1.28
Epithiospecifier protein from broccoli (Brassica oleracea L. ssp. italica) inhibits formation of the anticancer agent sulforaphane. J Agric Food Chem (2006) 1.27
Lateral root morphogenesis is dependent on the mechanical properties of the overlaying tissues. Proc Natl Acad Sci U S A (2013) 1.27
The case for morphogens in plants. Nat Cell Biol (2003) 1.26
CellSeT: novel software to extract and analyze structured networks of plant cells from confocal images. Plant Cell (2012) 1.26
Risk factors for anastomotic leakage after anterior resection for rectal cancer. JAMA Surg (2013) 1.26
Stochastic and deterministic multiscale models for systems biology: an auxin-transport case study. BMC Syst Biol (2010) 1.25
Multiscale systems analysis of root growth and development: modeling beyond the network and cellular scales. Plant Cell (2012) 1.25
Hormonal regulation of root growth: integrating local activities into global behaviour. Trends Plant Sci (2012) 1.24
Root gravitropism is regulated by a transient lateral auxin gradient controlled by a tipping-point mechanism. Proc Natl Acad Sci U S A (2012) 1.22
Robotic-assisted colorectal surgery in the United States: a nationwide analysis of trends and outcomes. World J Surg (2013) 1.15
Risk factors for conversion of laparoscopic colorectal surgery to open surgery: does conversion worsen outcome? World J Surg (2015) 1.14
Comparison of outcomes of laparoscopic versus open appendectomy in children: data from the Nationwide Inpatient Sample (NIS), 2006-2008. World J Surg (2012) 1.14
Post-embryonic root organogenesis in cereals: branching out from model plants. Trends Plant Sci (2013) 1.13
Auxin reflux between the endodermis and pericycle promotes lateral root initiation. EMBO J (2012) 1.12
Mathematical modeling elucidates the role of transcriptional feedback in gibberellin signaling. Proc Natl Acad Sci U S A (2012) 1.12
Variations in Laparoscopic Colectomy Utilization in the United States. Dis Colon Rectum (2015) 1.10
Sequential induction of auxin efflux and influx carriers regulates lateral root emergence. Mol Syst Biol (2013) 1.08
Outcomes of laparoscopic colorectal surgery: data from the Nationwide Inpatient Sample 2009. Am J Surg (2012) 1.07
Growth-induced hormone dilution can explain the dynamics of plant root cell elongation. Proc Natl Acad Sci U S A (2012) 1.06
A tale of two (anal fistula) plugs: is there a difference in short-term outcomes? Am Surg (2010) 1.05
New insight into the biochemical mechanisms regulating auxin transport in plants. Biochem J (2007) 1.04
Comprehensive metabolic profiling of mono- and polyglutamated folates and their precursors in plant and animal tissue using liquid chromatography/negative ion electrospray ionisation tandem mass spectrometry. Rapid Commun Mass Spectrom (2005) 1.04
Recovering the dynamics of root growth and development using novel image acquisition and analysis methods. Philos Trans R Soc Lond B Biol Sci (2012) 1.04
Apical-basal polarity: why plant cells don't stand on their heads. Trends Plant Sci (2005) 1.04
Plant systems biology: network matters. Plant Cell Environ (2011) 1.03
Conserved Arabidopsis ECHIDNA protein mediates trans-Golgi-network trafficking and cell elongation. Proc Natl Acad Sci U S A (2011) 1.03
Auxin carriers localization drives auxin accumulation in plant cells infected by Frankia in Casuarina glauca actinorhizal nodules. Plant Physiol (2010) 1.03
Practice parameters for the management of colon cancer. Dis Colon Rectum (2012) 1.02
Laparoscopic appendectomy trends and outcomes in the United States: data from the Nationwide Inpatient Sample (NIS), 2004-2011. Am Surg (2014) 1.02
The AUX1 LAX family of auxin influx carriers is required for the establishment of embryonic root cell organization in Arabidopsis thaliana. Ann Bot (2009) 1.01
Cytokinin induces cell division in the quiescent center of the Arabidopsis root apical meristem. Curr Biol (2013) 1.01
Folate biofortification in food plants. Trends Plant Sci (2007) 1.01
Comparison of laparoscopic versus open appendectomy for acute nonperforated and perforated appendicitis in the obese population. Am J Surg (2011) 1.00
A scanner system for high-resolution quantification of variation in root growth dynamics of Brassica rapa genotypes. J Exp Bot (2014) 0.98
SHORT-ROOT and SCARECROW regulate leaf growth in Arabidopsis by stimulating S-phase progression of the cell cycle. Plant Physiol (2010) 0.98
Blood transfusions in colorectal cancer surgery: incidence, outcomes, and predictive factors: an American College of Surgeons National Surgical Quality Improvement Program analysis. Am J Surg (2013) 0.95
Integration of hormonal signaling networks and mobile microRNAs is required for vascular patterning in Arabidopsis roots. Proc Natl Acad Sci U S A (2013) 0.95
Does laparoscopic appendectomy impart an advantage over open appendectomy in elderly patients? World J Surg (2012) 0.95
Mechanical modelling quantifies the functional importance of outer tissue layers during root elongation and bending. New Phytol (2014) 0.95
Population-based evaluation of adenosquamous carcinoma of the colon and rectum. Dis Colon Rectum (2012) 0.95