Published in Nat Struct Mol Biol on December 14, 2008
SF1 and SF2 helicases: family matters. Curr Opin Struct Biol (2010) 3.79
Type I restriction enzymes and their relatives. Nucleic Acids Res (2013) 1.54
Extensive DNA mimicry by the ArdA anti-restriction protein and its role in the spread of antibiotic resistance. Nucleic Acids Res (2009) 1.38
Sequence, structure and functional diversity of PD-(D/E)XK phosphodiesterase superfamily. Nucleic Acids Res (2012) 1.18
Structure and operation of the DNA-translocating type I DNA restriction enzymes. Genes Dev (2012) 1.13
Duplex RNA activated ATPases (DRAs): platforms for RNA sensing, signaling and processing. RNA Biol (2012) 1.10
Characterization and crystal structure of the type IIG restriction endonuclease RM.BpuSI. Nucleic Acids Res (2011) 1.03
Maintaining a sense of direction during long-range communication on DNA. Biochem Soc Trans (2010) 0.99
The fragment structure of a putative HsdR subunit of a type I restriction enzyme from Vibrio vulnificus YJ016: implications for DNA restriction and translocation activity. Nucleic Acids Res (2009) 0.90
Superfamily 2 helicases. Front Biosci (Landmark Ed) (2012) 0.89
Type III restriction endonuclease EcoP15I is a heterotrimeric complex containing one Res subunit with several DNA-binding regions and ATPase activity. Nucleic Acids Res (2011) 0.87
Structural and functional analysis of the engineered type I DNA methyltransferase EcoR124I(NT). J Mol Biol (2010) 0.84
Structural and functional analysis of the symmetrical Type I restriction endonuclease R.EcoR124I(NT). PLoS One (2012) 0.80
Interdomain communication in the endonuclease/motor subunit of type I restriction-modification enzyme EcoR124I. J Mol Model (2014) 0.77
Functional coupling of duplex translocation to DNA cleavage in a type I restriction enzyme. PLoS One (2015) 0.76
Genome-wide survey of codons under diversifying selection in a highly recombining bacterial species, Helicobacter pylori. DNA Res (2016) 0.75
Cloning, crystallization and preliminary X-ray diffraction analysis of an intact DNA methyltransferase of a type I restriction-modification enzyme from Vibrio vulnificus. Acta Crystallogr F Struct Biol Commun (2014) 0.75
The helical domain of the EcoR124I motor subunit participates in ATPase activity and dsDNA translocation. PeerJ (2017) 0.75
Crystal structure of the R-protein of the multisubunit ATP-dependent restriction endonuclease NgoAVII. Nucleic Acids Res (2014) 0.75
Structural basis for RNA unwinding by the DEAD-box protein Drosophila Vasa. Cell (2006) 5.70
UvrD helicase unwinds DNA one base pair at a time by a two-part power stroke. Cell (2006) 3.65
Type I restriction systems: sophisticated molecular machines (a legacy of Bertani and Weigle). Microbiol Mol Biol Rev (2000) 3.55
X-ray structures of the Sulfolobus solfataricus SWI2/SNF2 ATPase core and its complex with DNA. Cell (2005) 3.04
Real-time observation of DNA translocation by the type I restriction modification enzyme EcoR124I. Nat Struct Mol Biol (2004) 2.56
Snf2 family ATPases and DExx box helicases: differences and unifying concepts from high-resolution crystal structures. Nucleic Acids Res (2006) 1.73
When a helicase is not a helicase: dsDNA tracking by the motor protein EcoR124I. EMBO J (2006) 1.51
On the structure and operation of type I DNA restriction enzymes. J Mol Biol (1999) 1.48
Repercussions of DNA tracking by the type IC restriction endonuclease EcoR124I on linear, circular and catenated substrates. EMBO J (1996) 1.45
Motor step size and ATP coupling efficiency of the dsDNA translocase EcoR124I. EMBO J (2008) 1.28
Is modification sufficient to protect a bacterial chromosome from a resident restriction endonuclease? Mol Microbiol (2004) 1.17
Initiation of translocation by Type I restriction-modification enzymes is associated with a short DNA extrusion. Nucleic Acids Res (2004) 1.14
Conformational changes of a Swi2/Snf2 ATPase during its mechano-chemical cycle. Nucleic Acids Res (2008) 1.14
Sequence-specific DNA binding by EcoKI, a type IA DNA restriction enzyme. J Mol Biol (1998) 1.11
Topology of Type II REases revisited; structural classes and the common conserved core. Nucleic Acids Res (2007) 1.11
Protein-protein and protein-DNA interactions in the type I restriction endonuclease R.EcoR124I. Biol Chem (1998) 1.10
RECQL5/Recql5 helicase regulates homologous recombination and suppresses tumor formation via disruption of Rad51 presynaptic filaments. Genes Dev (2007) 4.16
Human RECQ5beta, a protein with DNA helicase and strand-annealing activities in a single polypeptide. EMBO J (2004) 2.33
Constitutive phosphorylation of MDC1 physically links the MRE11-RAD50-NBS1 complex to damaged chromatin. J Cell Biol (2008) 2.21
The ubiquitin-selective segregase VCP/p97 orchestrates the response to DNA double-strand breaks. Nat Cell Biol (2011) 2.15
The HRDC domain of BLM is required for the dissolution of double Holliday junctions. EMBO J (2005) 1.84
Human RECQ5beta helicase promotes strand exchange on synthetic DNA structures resembling a stalled replication fork. Nucleic Acids Res (2006) 1.84
On the routine use of soft X-rays in macromolecular crystallography. Part IV. Efficient determination of anomalous substructures in biomacromolecules using longer X-ray wavelengths. Acta Crystallogr D Biol Crystallogr (2007) 1.78
The Bloom's syndrome helicase promotes the annealing of complementary single-stranded DNA. Nucleic Acids Res (2005) 1.76
Functional role of C-terminal cytoplasmic tail of rat vanilloid receptor 1. J Neurosci (2003) 1.65
Strictosidine synthase: mechanism of a Pictet-Spengler catalyzing enzyme. J Am Chem Soc (2008) 1.50
Retracted Heterologous expression, purification and characterization of nitrilase from Aspergillus niger K10. BMC Biotechnol (2011) 1.47
Structure-based engineering of strictosidine synthase: auxiliary for alkaloid libraries. Chem Biol (2007) 1.46
Automated technologies and novel techniques to accelerate protein crystallography for structural genomics. Proteomics (2008) 1.43
The structural basis of signal transduction for the response regulator PrrA from Mycobacterium tuberculosis. J Biol Chem (2006) 1.34
The structure of Rauvolfia serpentina strictosidine synthase is a novel six-bladed beta-propeller fold in plant proteins. Plant Cell (2006) 1.32
On the routine use of soft X-rays in macromolecular crystallography. Part III. The optimal data-collection wavelength. Acta Crystallogr D Biol Crystallogr (2005) 1.30
C4-dicarboxylates sensing mechanism revealed by the crystal structures of DctB sensor domain. J Mol Biol (2008) 1.28
Crystal structure of vinorine synthase, the first representative of the BAHD superfamily. J Biol Chem (2005) 1.26
S-adenosyl methionine prevents promiscuous DNA cleavage by the EcoP1I type III restriction enzyme. J Mol Biol (2003) 1.23
BLM helicase measures DNA unwound before switching strands and hRPA promotes unwinding reinitiation. EMBO J (2009) 1.21
Degradation of human exonuclease 1b upon DNA synthesis inhibition. Cancer Res (2005) 1.21
Physical interaction of RECQ5 helicase with RAD51 facilitates its anti-recombinase activity. J Biol Chem (2010) 1.19
Prolyl isomerase PIN1 regulates DNA double-strand break repair by counteracting DNA end resection. Mol Cell (2013) 1.19
MRE11 complex links RECQ5 helicase to sites of DNA damage. Nucleic Acids Res (2009) 1.11
RECQ5 helicase associates with the C-terminal repeat domain of RNA polymerase II during productive elongation phase of transcription. Nucleic Acids Res (2010) 1.08
On the influence of the incident photon energy on the radiation damage in crystalline biological samples. J Synchrotron Radiat (2005) 1.07
Structural insights into the mechanism of protein O-fucosylation. PLoS One (2011) 1.06
Cyanuric acid hydrolase: evolutionary innovation by structural concatenation. Mol Microbiol (2013) 1.06
Molecular architecture of strictosidine glucosidase: the gateway to the biosynthesis of the monoterpenoid indole alkaloid family. Plant Cell (2007) 1.05
Structural basis for parasite-specific functions of the divergent profilin of Plasmodium falciparum. Structure (2008) 1.05
3D-Structure and function of strictosidine synthase--the key enzyme of monoterpenoid indole alkaloid biosynthesis. Plant Physiol Biochem (2008) 1.02
Structural and functional aspects of the sensor histidine kinase PrrB from Mycobacterium tuberculosis. Structure (2006) 1.02
p300-mediated acetylation of the Rothmund-Thomson-syndrome gene product RECQL4 regulates its subcellular localization. J Cell Sci (2009) 1.01
The BC component of ABC toxins is an RHS-repeat-containing protein encapsulation device. Nature (2013) 1.00
The crystal structure of the herpes simplex virus 1 ssDNA-binding protein suggests the structural basis for flexible, cooperative single-stranded DNA binding. J Biol Chem (2004) 1.00
Transmembrane S1 mutations in CNGA3 from achromatopsia 2 patients cause loss of function and impaired cellular trafficking of the cone CNG channel. Invest Ophthalmol Vis Sci (2005) 0.99
Nonprocessive [2 + 2]e- off-loading reductase domains from mycobacterial nonribosomal peptide synthetases. Proc Natl Acad Sci U S A (2012) 0.98
The three-dimensional structure of the extracellular adhesion domain of the sialic acid-binding adhesin SabA from Helicobacter pylori. J Biol Chem (2013) 0.96
Crystal structures of a poplar thioredoxin peroxidase that exhibits the structure of glutathione peroxidases: insights into redox-driven conformational changes. J Mol Biol (2007) 0.96
Insights into ubiquitin-conjugating enzyme/ co-activator interactions from the structure of the Pex4p:Pex22p complex. EMBO J (2011) 0.96
Asymmetric allosteric activation of the symmetric ArgR hexamer. J Mol Biol (2004) 0.94
FBH1 helicase disrupts RAD51 filaments in vitro and modulates homologous recombination in mammalian cells. J Biol Chem (2013) 0.94
WrbA bridges bacterial flavodoxins and eukaryotic NAD(P)H:quinone oxidoreductases. Protein Sci (2007) 0.94
Role of flavin mononucleotide in the thermostability and oligomerization of Escherichia coli stress-defense protein WrbA. Biochemistry (2007) 0.92
Human RECQL5beta stimulates flap endonuclease 1. Nucleic Acids Res (2010) 0.91
Structural basis for the oxidation of protein-bound sulfur by the sulfur cycle molybdohemo-enzyme sulfane dehydrogenase SoxCD. J Biol Chem (2010) 0.91
The crystal structure of the CRISPR-associated protein Csn2 from Streptococcus agalactiae. J Struct Biol (2012) 0.90
The zinc-binding motif of human RECQ5beta suppresses the intrinsic strand-annealing activity of its DExH helicase domain and is essential for the helicase activity of the enzyme. Biochem J (2008) 0.90
Chloroplasts assemble the major subunit FaeG of Escherichia coli F4 (K88) fimbriae to strand-swapped dimers. J Mol Biol (2007) 0.89
On the DNA cleavage mechanism of Type I restriction enzymes. Nucleic Acids Res (2005) 0.89
Raman spectroscopy adds complementary detail to the high-resolution x-ray crystal structure of photosynthetic PsbP from Spinacia oleracea. PLoS One (2012) 0.89
RPA alleviates the inhibitory effect of vinylphosphonate internucleotide linkages on DNA unwinding by BLM and WRN helicases. Nucleic Acids Res (2004) 0.89
The human RecQ helicases BLM and RECQL4 cooperate to preserve genome stability. Nucleic Acids Res (2012) 0.88
Physical and functional interactions between Werner syndrome helicase and mismatch-repair initiation factors. Nucleic Acids Res (2007) 0.88
The structure of a full-length response regulator from Mycobacterium tuberculosis in a stabilized three-dimensional domain-swapped, activated state. J Biol Chem (2007) 0.88
Crystals of DhaA mutants from Rhodococcus rhodochrous NCIMB 13064 diffracted to ultrahigh resolution: crystallization and preliminary diffraction analysis. Acta Crystallogr Sect F Struct Biol Cryst Commun (2008) 0.88
Multi-method global analysis of thermodynamics and kinetics in reconstitution of monellin. Proteins (2004) 0.88
High-resolution structure of NodZ fucosyltransferase involved in the biosynthesis of the nodulation factor. Acta Biochim Pol (2007) 0.88
Symmetric allosteric mechanism of hexameric Escherichia coli arginine repressor exploits competition between L-arginine ligands and resident arginine residues. PLoS Comput Biol (2010) 0.87
Human RECQ5 helicase promotes repair of DNA double-strand breaks by synthesis-dependent strand annealing. Nucleic Acids Res (2013) 0.87
Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of DapB (Rv2773c) from Mycobacterium tuberculosis. Acta Crystallogr Sect F Struct Biol Cryst Commun (2005) 0.86
Structure of lambda CII: implications for recognition of direct-repeat DNA by an unusual tetrameric organization. Proc Natl Acad Sci U S A (2005) 0.85
Crystallization and preliminary X-ray analysis of a novel haloalkane dehalogenase DbeA from Bradyrhizobium elkani USDA94. Acta Crystallogr Sect F Struct Biol Cryst Commun (2009) 0.85
High-resolution structure of Bombyx mori lipoprotein 7: crystallographic determination of the identity of the protein and its potential role in detoxification. Acta Crystallogr D Biol Crystallogr (2012) 0.85
Spectroelectrochemical investigation of a flavoprotein with a flavin-modified gold electrode. Langmuir (2006) 0.85
Purification, crystallization and preliminary X-ray diffraction analysis of aspartate semialdehyde dehydrogenase (Rv3708c) from Mycobacterium tuberculosis. Acta Crystallogr Sect F Struct Biol Cryst Commun (2008) 0.85
Metal binding to porcine pancreatic elastase: calcium or not calcium. Acta Crystallogr D Biol Crystallogr (2002) 0.85
On the routine use of soft X-rays in macromolecular crystallography. Part II. Data-collection wavelength and scaling models. Acta Crystallogr D Biol Crystallogr (2003) 0.85
Structural characterization of the multidomain regulatory protein Rv1364c from Mycobacterium tuberculosis. Structure (2011) 0.84
Role of protein surface charge in monellin sweetness. Biochim Biophys Acta (2008) 0.84
Charybdotoxin unbinding from the mKv1.3 potassium channel: a combined computational and experimental study. J Phys Chem B (2011) 0.84
Involvement of Werner syndrome protein in MUTYH-mediated repair of oxidative DNA damage. Nucleic Acids Res (2012) 0.84
Crystallization and preliminary diffraction analysis of Escherichia coli WrbA in complex with its cofactor flavin mononucleotide. Acta Crystallogr Sect F Struct Biol Cryst Commun (2007) 0.84
Putative dioxygen-binding sites and recognition of tigecycline and minocycline in the tetracycline-degrading monooxygenase TetX. Acta Crystallogr D Biol Crystallogr (2013) 0.84
Calmodulin transduces Ca2+ oscillations into differential regulation of its target proteins. ACS Chem Neurosci (2013) 0.83
Crystal structure of NAD+-dependent Peptoniphilus asaccharolyticus glutamate dehydrogenase reveals determinants of cofactor specificity. J Struct Biol (2011) 0.83
Additional phase information from UV damage of selenomethionine labelled proteins. J Synchrotron Radiat (2011) 0.83
Backbone assignment and secondary structure of the PsbQ protein from photosystem II. Biomol NMR Assign (2011) 0.83
On the routine use of soft X-rays in macromolecular crystallography. Part V. Molecular replacement and anomalous scattering. Acta Crystallogr D Biol Crystallogr (2011) 0.83
Structure and dynamics of the N-terminal loop of PsbQ from photosystem II of Spinacia oleracea. Biochem Biophys Res Commun (2006) 0.83
E. coli trp repressor forms a domain-swapped array in aqueous alcohol. Structure (2004) 0.82
A catalytic mechanism revealed by the crystal structures of the imidazolonepropionase from Bacillus subtilis. J Biol Chem (2006) 0.82
Structural basis and enzymatic mechanism of the biosynthesis of C9- from C10-monoterpenoid indole alkaloids. Angew Chem Int Ed Engl (2009) 0.82
Scaffold tailoring by a newly detected Pictet-Spenglerase activity of strictosidine synthase: from the common tryptoline skeleton to the rare piperazino-indole framework. J Am Chem Soc (2012) 0.81
Purification, crystallization and preliminary X-ray analysis of the HsdR subunit of the EcoR124I endonuclease from Escherichia coli. Acta Crystallogr Sect F Struct Biol Cryst Commun (2007) 0.81
Structural insight in histo-blood group binding by the F18 fimbrial adhesin FedF. Mol Microbiol (2012) 0.81
Eight amino acids form the ATP recognition site of Na(+)/K(+)-ATPase. Biochemistry (2003) 0.81
Nonspecific base recognition mediated by water bridges and hydrophobic stacking in ribonuclease I from Escherichia coli. Protein Sci (2008) 0.81
Structures of alkaloid biosynthetic glucosidases decode substrate specificity. ACS Chem Biol (2011) 0.81
Structural analysis reveals DNA binding properties of Rv2827c, a hypothetical protein from Mycobacterium tuberculosis. J Struct Funct Genomics (2009) 0.81
Phe(475) and Glu(446) but not Ser(445) participate in ATP-binding to the alpha-subunit of Na(+)/K(+)-ATPase. Biochem Biophys Res Commun (2002) 0.81
Expression, purification, crystallization and preliminary X-ray analysis of perakine reductase, a new member of the aldo-keto reductase enzyme superfamily from higher plants. Acta Crystallogr Sect F Struct Biol Cryst Commun (2006) 0.81
Structural analysis of natural killer cell receptor protein 1 (NKR-P1) extracellular domains suggests a conserved long loop region involved in ligand specificity. J Mol Model (2010) 0.81
Molecular modeling of human MT2 melatonin receptor: the role of Val204, Leu272 and Tyr298 in ligand binding. J Neurochem (2004) 0.80
Structure of human alpha1-acid glycoprotein and its high-affinity binding site. Biochem Biophys Res Commun (2003) 0.79
Structural biology in plant natural product biosynthesis--architecture of enzymes from monoterpenoid indole and tropane alkaloid biosynthesis. Nat Prod Rep (2007) 0.79