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Computational tools for copy number variation (CNV) detection using next-generation sequencing data: features and perspectives. BMC Bioinformatics (2013) 2.07

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Clustering gene expression data using a graph-theoretic approach: an application of minimum spanning trees. Bioinformatics (2002) 1.81

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Global protein function annotation through mining genome-scale data in yeast Saccharomyces cerevisiae. Nucleic Acids Res (2004) 1.71

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Single feature polymorphism discovery in rice. PLoS One (2007) 1.42

Calculating potentials of mean force and diffusion coefficients from nonequilibrium processes without Jarzynski's equality. J Chem Phys (2006) 1.41

SoyDB: a knowledge database of soybean transcription factors. BMC Plant Biol (2010) 1.40

Characterizing loop dynamics and ligand recognition in human- and avian-type influenza neuraminidases via generalized born molecular dynamics and end-point free energy calculations. J Am Chem Soc (2009) 1.40

Prediction of novel miRNAs and associated target genes in Glycine max. BMC Bioinformatics (2010) 1.39

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PRIMEGENS-v2: genome-wide primer design for analyzing DNA methylation patterns of CpG islands. Bioinformatics (2008) 1.35

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Proteomic analysis of soybean root hairs after infection by Bradyrhizobium japonicum. Mol Plant Microbe Interact (2005) 1.27

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Genome-scale probe and primer design with PRIMEGENS. Methods Mol Biol (2007) 1.20

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Regulation of cellular oncosis by uncoupling protein 2. J Biol Chem (2002) 1.17

ProteinDBS: a real-time retrieval system for protein structure comparison. Nucleic Acids Res (2004) 1.17

Identification of miRNA from Porphyra yezoensis by high-throughput sequencing and bioinformatics analysis. PLoS One (2010) 1.15

Targeted bisulfite sequencing by solution hybrid selection and massively parallel sequencing. Nucleic Acids Res (2011) 1.15

Establishment of a protein reference map for soybean root hair cells. Plant Physiol (2008) 1.14

Automated Tongue Feature Extraction for ZHENG Classification in Traditional Chinese Medicine. Evid Based Complement Alternat Med (2012) 1.12

Improving the performance of DomainParser for structural domain partition using neural network. Nucleic Acids Res (2003) 1.12

Quantitative assessment of relationship between sequence similarity and function similarity. BMC Genomics (2007) 1.12

Transcription profiling of soybean nodulation by Bradyrhizobium japonicum. Mol Plant Microbe Interact (2008) 1.11

Targeting oncogenic miR-335 inhibits growth and invasion of malignant astrocytoma cells. Mol Cancer (2011) 1.11

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