Published in PLoS One on December 22, 2009
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Draft genome sequence of the biocontrol bacterium Chromobacterium sp. strain C-61. J Bacteriol (2011) 0.79
Draft Genome Sequence of Cryptococcus flavescens Strain OH182.9_3C, a Biocontrol Agent against Fusarium Head Blight of Wheat. Genome Announc (2013) 0.79
Group II Intron-Mediated Trans-Splicing in the Gene-Rich Mitochondrial Genome of an Enigmatic Eukaryote, Diphylleia rotans. Genome Biol Evol (2016) 0.78
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A Non-Synonymous HMGA2 Variant Decreases Height in Shetland Ponies and Other Small Horses. PLoS One (2015) 0.78
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Complete genome sequence of Rickettsia heilongjiangensis, an emerging tick-transmitted human pathogen. J Bacteriol (2011) 0.78
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Transcriptome profiling of sulfate deprivation responses in two agarophytes Gracilaria changii and Gracilaria salicornia (Rhodophyta). Sci Rep (2017) 0.75
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Hybrid de novo tandem repeat detection using short and long reads. BMC Med Genomics (2015) 0.75
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OMACC: an Optical-Map-Assisted Contig Connector for improving de novo genome assembly. BMC Syst Biol (2013) 0.75
Global analyses of Ceratocystis cacaofunesta mitochondria: from genome to proteome. BMC Genomics (2013) 0.75
Isolation and characterization of 22 EST-SSR markers for the genus Thujopsis (Cupressaceae). Appl Plant Sci (2015) 0.75
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ARACHNE: a whole-genome shotgun assembler. Genome Res (2002) 22.72
ALLPATHS: de novo assembly of whole-genome shotgun microreads. Genome Res (2008) 20.61
Assembling millions of short DNA sequences using SSAKE. Bioinformatics (2006) 18.71
SHARCGS, a fast and highly accurate short-read assembly algorithm for de novo genomic sequencing. Genome Res (2007) 16.20
Short read fragment assembly of bacterial genomes. Genome Res (2007) 15.40
De novo bacterial genome sequencing: millions of very short reads assembled on a desktop computer. Genome Res (2008) 14.90
Extending assembly of short DNA sequences to handle error. Bioinformatics (2007) 14.46
The fragment assembly string graph. Bioinformatics (2005) 11.84
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An analysis of the feasibility of short read sequencing. Nucleic Acids Res (2005) 6.10
Fragment assembly with double-barreled data. Bioinformatics (2001) 6.04
Hierarchical scaffolding with Bambus. Genome Res (2004) 4.95
Crystallizing short-read assemblies around seeds. BMC Bioinformatics (2009) 2.89
De novo assembly of the Pseudomonas syringae pv. syringae B728a genome using Illumina/Solexa short sequence reads. FEMS Microbiol Lett (2008) 2.50
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Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project. Nature (2007) 75.09
The Bioperl toolkit: Perl modules for the life sciences. Genome Res (2002) 58.63
The Pfam protein families database. Nucleic Acids Res (2002) 51.34
Patterns of somatic mutation in human cancer genomes. Nature (2007) 38.41
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Genome sequence of the Brown Norway rat yields insights into mammalian evolution. Nature (2004) 24.40
A Bayesian deconvolution strategy for immunoprecipitation-based DNA methylome analysis. Nat Biotechnol (2008) 21.72
The genome sequence of the malaria mosquito Anopheles gambiae. Science (2002) 20.36
International network of cancer genome projects. Nature (2010) 20.35
A small-cell lung cancer genome with complex signatures of tobacco exposure. Nature (2009) 18.39
EnsMart: a generic system for fast and flexible access to biological data. Genome Res (2004) 17.64
Evolutionary and biomedical insights from the rhesus macaque genome. Science (2007) 16.21
High-resolution mapping and characterization of open chromatin across the genome. Cell (2008) 15.93
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Ensembl 2012. Nucleic Acids Res (2011) 14.55
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EnsemblCompara GeneTrees: Complete, duplication-aware phylogenetic trees in vertebrates. Genome Res (2008) 12.72
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Optimized design and assessment of whole genome tiling arrays. Bioinformatics (2007) 11.38
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Ensembl's 10th year. Nucleic Acids Res (2009) 10.82
Mouse genomic variation and its effect on phenotypes and gene regulation. Nature (2011) 10.66
Highly conserved non-coding sequences are associated with vertebrate development. PLoS Biol (2004) 10.59
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Comparative genome and proteome analysis of Anopheles gambiae and Drosophila melanogaster. Science (2002) 9.43
Genome sequence of Aedes aegypti, a major arbovirus vector. Science (2007) 9.19
The BioPAX community standard for pathway data sharing. Nat Biotechnol (2010) 9.19
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A high-resolution map of human evolutionary constraint using 29 mammals. Nature (2011) 8.67
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Integrating biological data--the Distributed Annotation System. BMC Bioinformatics (2008) 6.56
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The genomic basis of adaptive evolution in threespine sticklebacks. Nature (2012) 5.20
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Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity. Genome Res (2011) 4.43
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Integrative annotation of chromatin elements from ENCODE data. Nucleic Acids Res (2012) 3.80
Mapping identifiers for the integration of genomic datasets with the R/Bioconductor package biomaRt. Nat Protoc (2009) 3.77
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