Published in BMC Bioinformatics on January 18, 2010
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An approach to forecast human cancer by profiling microRNA expressions from NGS data. BMC Cancer (2017) 0.75
Prediction of microRNA target genes using an efficient genetic algorithm-based decision tree. FEBS Open Bio (2015) 0.75
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Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets. Cell (2005) 96.87
Prediction of mammalian microRNA targets. Cell (2003) 53.70
Combinatorial microRNA target predictions. Nat Genet (2005) 50.48
Oncomirs - microRNAs with a role in cancer. Nat Rev Cancer (2006) 46.47
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MicroRNA targeting specificity in mammals: determinants beyond seed pairing. Mol Cell (2007) 38.42
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MicroRNA gene expression deregulation in human breast cancer. Cancer Res (2005) 27.56
Principles of microRNA-target recognition. PLoS Biol (2005) 23.70
MicroRNA targets in Drosophila. Genome Biol (2003) 23.59
A microRNA in a multiple-turnover RNAi enzyme complex. Science (2002) 23.36
Specificity of microRNA target selection in translational repression. Genes Dev (2004) 21.14
MicroRNAs in plants. Genes Dev (2002) 20.12
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Prediction of plant microRNA targets. Cell (2002) 19.20
MicroRNA biogenesis: coordinated cropping and dicing. Nat Rev Mol Cell Biol (2005) 18.94
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Fast and effective prediction of microRNA/target duplexes. RNA (2004) 18.10
EnsMart: a generic system for fast and flexible access to biological data. Genome Res (2004) 17.64
Classification and diagnostic prediction of cancers using gene expression profiling and artificial neural networks. Nat Med (2001) 16.65
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Identification of hundreds of conserved and nonconserved human microRNAs. Nat Genet (2005) 15.96
Animal MicroRNAs confer robustness to gene expression and have a significant impact on 3'UTR evolution. Cell (2005) 15.38
A pattern-based method for the identification of MicroRNA binding sites and their corresponding heteroduplexes. Cell (2006) 14.70
Computational identification of plant microRNAs and their targets, including a stress-induced miRNA. Mol Cell (2004) 12.97
A genome-wide map of conserved microRNA targets in C. elegans. Curr Biol (2006) 10.14
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Human RISC couples microRNA biogenesis and posttranscriptional gene silencing. Cell (2005) 9.27
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microRNA target predictions across seven Drosophila species and comparison to mammalian targets. PLoS Comput Biol (2005) 6.77
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Computational prediction of miRNAs in Arabidopsis thaliana. Genome Res (2005) 2.86
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Weighted sequence motifs as an improved seeding step in microRNA target prediction algorithms. RNA (2005) 1.46
Prediction and verification of microRNA targets by MovingTargets, a highly adaptable prediction method. BMC Genomics (2005) 1.33
MicroTar: predicting microRNA targets from RNA duplexes. BMC Bioinformatics (2006) 1.26
Classification of bacterial species from proteomic data using combinatorial approaches incorporating artificial neural networks, cluster analysis and principal components analysis. Bioinformatics (2005) 1.08
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A scoring matrix approach to detecting miRNA target sites. Algorithms Mol Biol (2008) 0.84
Umbilical cord blood-derived mesenchymal stem cells consist of a unique population of progenitors co-expressing mesenchymal stem cell and neuronal markers capable of instantaneous neuronal differentiation. Stem Cell Res Ther (2012) 1.06
Biclustering of gene expression data using reactive greedy randomized adaptive search procedure. BMC Bioinformatics (2009) 1.02
Programming languages for synthetic biology. Syst Synth Biol (2011) 0.86
Protein location prediction using atomic composition and global features of the amino acid sequence. Biochem Biophys Res Commun (2009) 0.85
Sequence signatures of allosteric proteins towards rational design. Syst Synth Biol (2011) 0.84
Identification and analysis of novel microRNAs from fragile sites of human cervical cancer: computational and experimental approach. Genomics (2011) 0.78
Prognostic significance of STAT3 and phosphorylated STAT3 in human soft tissue tumors - a clinicopathological analysis. J Exp Clin Cancer Res (2011) 0.78
The elusive short gene--an ensemble method for recognition for prokaryotic genome. Biochem Biophys Res Commun (2012) 0.77
Looking for a sequence based allostery definition: a statistical journey at different resolution scales. J Theor Biol (2012) 0.77
IntmiR: a complete catalogue of intronic miRNAs of human and mouse. Bioinformation (2011) 0.75
MethFinder - A software package for prediction of human tissue-specific methylation status of CpG islands. Bioinformation (2013) 0.75
Diversity of Hepatitis C virus in Southern India Based on 5'UTR Sequence. Indian J Virol (2012) 0.75
Isolation and characterization of a novel chlorpyrifos degrading flavobacterium species EMBS0145 by 16S rRNA gene sequencing. Interdiscip Sci (2014) 0.75
GEN-SNiP: an online tool to find polymorphisms in a genome. In Silico Biol (2009) 0.75
Erratum to: Identification and characterization of alkaline protease producing bacillus firmus species EMBS023 by 16S rRNA gene sequencing. Interdiscip Sci (2015) 0.75
Identification and characterization of alkaline protease producing Bacillus firmus species EMBS023 by 16S rRNA gene sequencing. Interdiscip Sci (2014) 0.75
Identification and Characterization of a Pesticide Degrading Flavobacterium Species EMBS0145 by 16S rRNA Gene Sequencing. Interdiscip Sci (2015) 0.75