Published in Differentiation on February 18, 2010
Defining and redefining the nephron progenitor population. Pediatr Nephrol (2011) 1.23
Betaglycan is required for the establishment of nephron endowment in the mouse. PLoS One (2011) 0.93
Development of embryonic stem cells in recombinant kidneys. Organogenesis (2012) 0.92
Stem cell transcriptome profiling via massive-scale mRNA sequencing. Nat Methods (2008) 31.04
Signatures of mutational processes in human cancer. Nature (2013) 21.63
International network of cancer genome projects. Nature (2010) 20.35
Genome-wide analysis of mammalian promoter architecture and evolution. Nat Genet (2006) 17.19
Pancreatic cancer genomes reveal aberrations in axon guidance pathway genes. Nature (2012) 8.31
Long noncoding RNAs in mouse embryonic stem cell pluripotency and differentiation. Genome Res (2008) 6.43
The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line. Nat Genet (2009) 6.02
The regulated retrotransposon transcriptome of mammalian cells. Nat Genet (2009) 5.79
Experimental validation of the regulated expression of large numbers of non-coding RNAs from the mouse genome. Genome Res (2005) 4.86
Prognostic significance of p16INK4A and human papillomavirus in patients with oropharyngeal cancer treated on TROG 02.02 phase III trial. J Clin Oncol (2010) 4.39
Tiny RNAs associated with transcription start sites in animals. Nat Genet (2009) 4.19
The deubiquitinase USP9X suppresses pancreatic ductal adenocarcinoma. Nature (2012) 3.23
A rescue strategy for multimapping short sequence tags refines surveys of transcriptional activity by CAGE. Genomics (2008) 3.19
A side order of stem cells: the SP phenotype. Stem Cells (2006) 2.73
GUDMAP: the genitourinary developmental molecular anatomy project. J Am Soc Nephrol (2008) 2.45
Atlas of gene expression in the developing kidney at microanatomic resolution. Dev Cell (2008) 2.44
A de novo mutation in the β-tubulin gene TUBB4A results in the leukoencephalopathy hypomyelination with atrophy of the basal ganglia and cerebellum. Am J Hum Genet (2013) 2.42
Glomerular number and size in autopsy kidneys: the relationship to birth weight. Kidney Int (2003) 2.40
The miR-17-5p microRNA is a key regulator of the G1/S phase cell cycle transition. Genome Biol (2008) 2.29
PINA v2.0: mining interactome modules. Nucleic Acids Res (2011) 2.23
NRED: a database of long noncoding RNA expression. Nucleic Acids Res (2008) 2.21
The GUDMAP database--an online resource for genitourinary research. Development (2011) 2.20
MicroRNAs and their isomiRs function cooperatively to target common biological pathways. Genome Biol (2011) 2.15
Transcriptome content and dynamics at single-nucleotide resolution. Genome Biol (2008) 2.12
A global role for KLF1 in erythropoiesis revealed by ChIP-seq in primary erythroid cells. Genome Res (2010) 2.02
Endothelial-myofibroblast transition contributes to the early development of diabetic renal interstitial fibrosis in streptozotocin-induced diabetic mice. Am J Pathol (2009) 2.01
The abundance of short proteins in the mammalian proteome. PLoS Genet (2006) 1.96
A stereological study of glomerular number and volume: preliminary findings in a multiracial study of kidneys at autopsy. Kidney Int Suppl (2003) 1.90
Analysis of early nephron patterning reveals a role for distal RV proliferation in fusion to the ureteric tip via a cap mesenchyme-derived connecting segment. Dev Biol (2009) 1.83
Sleeping Beauty mutagenesis reveals cooperating mutations and pathways in pancreatic adenocarcinoma. Proc Natl Acad Sci U S A (2012) 1.82
RNA-MATE: a recursive mapping strategy for high-throughput RNA-sequencing data. Bioinformatics (2009) 1.81
The uniqueome: a mappability resource for short-tag sequencing. Bioinformatics (2010) 1.79
Luminal mitosis drives epithelial cell dispersal within the branching ureteric bud. Dev Cell (2013) 1.79
A high-resolution anatomical ontology of the developing murine genitourinary tract. Gene Expr Patterns (2007) 1.77
qpure: A tool to estimate tumor cellularity from genome-wide single-nucleotide polymorphism profiles. PLoS One (2012) 1.77
Effect of fetal and child health on kidney development and long-term risk of hypertension and kidney disease. Lancet (2013) 1.73
Genome-wide identification of long noncoding RNAs in CD8+ T cells. J Immunol (2009) 1.73
Conservation and divergence in Toll-like receptor 4-regulated gene expression in primary human versus mouse macrophages. Proc Natl Acad Sci U S A (2012) 1.72
Role of microRNAs in kidney homeostasis and disease. Kidney Int (2012) 1.72
Kidney side population reveals multilineage potential and renal functional capacity but also cellular heterogeneity. J Am Soc Nephrol (2006) 1.70
The phasevarion: a genetic system controlling coordinated, random switching of expression of multiple genes. Proc Natl Acad Sci U S A (2005) 1.63
Characterisation and trophic functions of murine embryonic macrophages based upon the use of a Csf1r-EGFP transgene reporter. Dev Biol (2007) 1.61
Is there such a thing as a renal stem cell? J Am Soc Nephrol (2009) 1.61
Nephron number, hypertension, renal disease, and renal failure. J Am Soc Nephrol (2005) 1.57
Renal biopsy findings among Indigenous Australians: a nationwide review. Kidney Int (2012) 1.56
A comparison of nephron number, glomerular volume and kidney weight in Senegalese Africans and African Americans. Nephrol Dial Transplant (2010) 1.56
Novel genes regulated by Sonic Hedgehog in pluripotent mesenchymal cells. Oncogene (2002) 1.51
Vitamin C promotes widespread yet specific DNA demethylation of the epigenome in human embryonic stem cells. Stem Cells (2010) 1.50
Blockade of endothelial-mesenchymal transition by a Smad3 inhibitor delays the early development of streptozotocin-induced diabetic nephropathy. Diabetes (2010) 1.48
Phasevarions mediate random switching of gene expression in pathogenic Neisseria. PLoS Pathog (2009) 1.48
Mutations in DARS cause hypomyelination with brain stem and spinal cord involvement and leg spasticity. Am J Hum Genet (2013) 1.46
A human phase 1 vaccine clinical trial of the Plasmodium falciparum malaria vaccine candidate apical membrane antigen 1 in Montanide ISA720 adjuvant. Vaccine (2005) 1.45
Comprehensive transcriptome and immunophenotype analysis of renal and cardiac MSC-like populations supports strong congruence with bone marrow MSC despite maintenance of distinct identities. Stem Cell Res (2011) 1.45
The contribution of bone marrow-derived cells to the development of renal interstitial fibrosis. Stem Cells (2006) 1.40
Renal structural and functional repair in a mouse model of reversal of ureteral obstruction. J Am Soc Nephrol (2005) 1.40
Characterization of the OxyR regulon of Neisseria gonorrhoeae. Mol Microbiol (2006) 1.40
Nephron number, renal function, and arterial pressure in aged GDNF heterozygous mice. Hypertension (2003) 1.37
Colony-stimulating factor-1 promotes kidney growth and repair via alteration of macrophage responses. Am J Pathol (2011) 1.37
Dynamic transcription programs during ES cell differentiation towards mesoderm in serum versus serum-freeBMP4 culture. BMC Genomics (2007) 1.34
Prenatal corticosterone exposure results in altered AT1/AT2, nephron deficit and hypertension in the rat offspring. J Physiol (2007) 1.34
Resveratrol inhibits renal fibrosis in the obstructed kidney: potential role in deacetylation of Smad3. Am J Pathol (2010) 1.33
Regulated post-transcriptional RNA cleavage diversifies the eukaryotic transcriptome. Genome Res (2010) 1.32
Probabilistic resolution of multi-mapping reads in massively parallel sequencing data using MuMRescueLite. Bioinformatics (2009) 1.32
Accelerated maturation and abnormal morphology in the preterm neonatal kidney. J Am Soc Nephrol (2011) 1.31
In vitro differentiation of murine embryonic stem cells toward a renal lineage. Differentiation (2007) 1.31
Determinants of glomerular volume in different cortical zones of the human kidney. J Am Soc Nephrol (2005) 1.31
Nephron number, glomerular volume, renal disease and hypertension. Curr Opin Nephrol Hypertens (2008) 1.30
Associations of glomerular number and birth weight with clinicopathological features of African Americans and whites. Am J Kidney Dis (2008) 1.30
Defining the molecular character of the developing and adult kidney podocyte. PLoS One (2011) 1.29
Renal cilia display length alterations following tubular injury and are present early in epithelial repair. Nephrol Dial Transplant (2007) 1.28
Requirement of PDZ-containing proteins for cell cycle regulation and differentiation in the mouse lens epithelium. Mol Cell Biol (2003) 1.27
miR-139-5p is a regulator of metastatic pathways in breast cancer. RNA (2013) 1.25
Genome-wide DNA methylation patterns in pancreatic ductal adenocarcinoma reveal epigenetic deregulation of SLIT-ROBO, ITGA2 and MET signaling. Int J Cancer (2014) 1.24
Defining and redefining the nephron progenitor population. Pediatr Nephrol (2011) 1.23
Angioblast-mesenchyme induction of early kidney development is mediated by Wt1 and Vegfa. Development (2005) 1.23
Oncogenic function for the Dlg1 mammalian homolog of the Drosophila discs-large tumor suppressor. EMBO J (2006) 1.22
Nephron formation adopts a novel spatial topology at cessation of nephrogenesis. Dev Biol (2011) 1.21
Differential requirement for beta-catenin in epithelial and fiber cells during lens development. Dev Biol (2008) 1.21
Does nephron number matter in the development of kidney disease? Ethn Dis (2006) 1.19
Identifying the molecular phenotype of renal progenitor cells. J Am Soc Nephrol (2004) 1.18
Identification of human embryonic stem cell surface markers by combined membrane-polysome translation state array analysis and immunotranscriptional profiling. Stem Cells (2009) 1.16
Use of dual section mRNA in situ hybridisation/immunohistochemistry to clarify gene expression patterns during the early stages of nephron development in the embryo and in the mature nephron of the adult mouse kidney. Histochem Cell Biol (2008) 1.15
Measuring glomerular number and size in perfused kidneys using MRI. Am J Physiol Renal Physiol (2011) 1.15
Direct transcriptional reprogramming of adult cells to embryonic nephron progenitors. J Am Soc Nephrol (2013) 1.14
Phasevarion mediated epigenetic gene regulation in Helicobacter pylori. PLoS One (2011) 1.13
Genome-wide review of transcriptional complexity in mouse protein kinases and phosphatases. Genome Biol (2006) 1.13