|
1
|
Intra- and interspecific variation in primate gene expression patterns.
|
Science
|
2002
|
7.92
|
|
2
|
The evolution of gene expression levels in mammalian organs.
|
Nature
|
2011
|
7.16
|
|
3
|
A genome-wide comparison of recent chimpanzee and human segmental duplications.
|
Nature
|
2005
|
5.51
|
|
4
|
Fast mapping of short sequences with mismatches, insertions and deletions using index structures.
|
PLoS Comput Biol
|
2009
|
4.24
|
|
5
|
Estimating accuracy of RNA-Seq and microarrays with proteomics.
|
BMC Genomics
|
2009
|
3.87
|
|
6
|
MicroRNA, mRNA, and protein expression link development and aging in human and macaque brain.
|
Genome Res
|
2010
|
2.44
|
|
7
|
FUNC: a package for detecting significant associations between gene sets and ontological annotations.
|
BMC Bioinformatics
|
2007
|
2.32
|
|
8
|
Histone demethylase UTX-1 regulates C. elegans life span by targeting the insulin/IGF-1 signaling pathway.
|
Cell Metab
|
2011
|
2.22
|
|
9
|
Lineage-specific expansions of retroviral insertions within the genomes of African great apes but not humans and orangutans.
|
PLoS Biol
|
2005
|
1.82
|
|
10
|
Transcriptional neoteny in the human brain.
|
Proc Natl Acad Sci U S A
|
2009
|
1.78
|
|
11
|
Aging and gene expression in the primate brain.
|
PLoS Biol
|
2005
|
1.76
|
|
12
|
Sequence features associated with microRNA strand selection in humans and flies.
|
BMC Genomics
|
2009
|
1.76
|
|
13
|
Birth and expression evolution of mammalian microRNA genes.
|
Genome Res
|
2012
|
1.64
|
|
14
|
Comprehensive survey of human brain microRNA by deep sequencing.
|
BMC Genomics
|
2010
|
1.59
|
|
15
|
MicroRNA-driven developmental remodeling in the brain distinguishes humans from other primates.
|
PLoS Biol
|
2011
|
1.57
|
|
16
|
Widespread expression of piRNA-like molecules in somatic tissues.
|
Nucleic Acids Res
|
2011
|
1.56
|
|
17
|
Evidence for human microRNA-offset RNAs in small RNA sequencing data.
|
Bioinformatics
|
2009
|
1.55
|
|
18
|
Insulinoma-associated 1 has a panneurogenic role and promotes the generation and expansion of basal progenitors in the developing mouse neocortex.
|
Neuron
|
2008
|
1.54
|
|
19
|
Comparison of protein and mRNA expression evolution in humans and chimpanzees.
|
PLoS One
|
2007
|
1.42
|
|
20
|
MicroRNA expression and regulation in human, chimpanzee, and macaque brains.
|
PLoS Genet
|
2011
|
1.40
|
|
21
|
Human and chimpanzee gene expression differences replicated in mice fed different diets.
|
PLoS One
|
2008
|
1.35
|
|
22
|
Intergenic and repeat transcription in human, chimpanzee and macaque brains measured by RNA-Seq.
|
PLoS Comput Biol
|
2010
|
1.33
|
|
23
|
Extension of cortical synaptic development distinguishes humans from chimpanzees and macaques.
|
Genome Res
|
2012
|
1.27
|
|
24
|
Human brain evolution.
|
Prog Brain Res
|
2006
|
1.26
|
|
25
|
Widespread splicing changes in human brain development and aging.
|
Mol Syst Biol
|
2013
|
1.23
|
|
26
|
Gene expression becomes heterogeneous with age.
|
Curr Biol
|
2006
|
1.18
|
|
27
|
Human brain evolution: transcripts, metabolites and their regulators.
|
Nat Rev Neurosci
|
2013
|
1.16
|
|
28
|
Positive selection on gene expression in the human brain.
|
Curr Biol
|
2006
|
1.14
|
|
29
|
Rapid metabolic evolution in human prefrontal cortex.
|
Proc Natl Acad Sci U S A
|
2011
|
1.09
|
|
30
|
Evolution of the human-specific microRNA miR-941.
|
Nat Commun
|
2012
|
1.06
|
|
31
|
Genomic analysis of miRNAs in an extreme mammalian hibernator, the Arctic ground squirrel.
|
Physiol Genomics
|
2010
|
0.98
|
|
32
|
Systematic analysis of gene expression in human brains before and after death.
|
Genome Biol
|
2005
|
0.98
|
|
33
|
Evolutionary forces shape the human RFPL1,2,3 genes toward a role in neocortex development.
|
Am J Hum Genet
|
2008
|
0.93
|
|
34
|
Ab initio identification of transcription start sites in the Rhesus macaque genome by histone modification and RNA-Seq.
|
Nucleic Acids Res
|
2010
|
0.90
|
|
35
|
Functional analysis of human and chimpanzee promoters.
|
Genome Biol
|
2005
|
0.89
|
|
36
|
Transcript and protein expression decoupling reveals RNA binding proteins and miRNAs as potential modulators of human aging.
|
Genome Biol
|
2015
|
0.89
|
|
37
|
Stress-associated H3K4 methylation accumulates during postnatal development and aging of rhesus macaque brain.
|
Aging Cell
|
2012
|
0.87
|
|
38
|
The effects of probe binding affinity differences on gene expression measurements and how to deal with them.
|
Bioinformatics
|
2009
|
0.86
|
|
39
|
Evolution of neuronal and endothelial transcriptomes in primates.
|
Genome Biol Evol
|
2010
|
0.85
|
|
40
|
Evolutionary and ontogenetic changes in RNA editing in human, chimpanzee, and macaque brains.
|
RNA
|
2013
|
0.83
|
|
41
|
Development and application of a modified dynamic time warping algorithm (DTW-S) to analyses of primate brain expression time series.
|
BMC Bioinformatics
|
2011
|
0.82
|
|
42
|
Spatial proximity and similarity of the epigenetic state of genome domains.
|
PLoS One
|
2012
|
0.82
|
|
43
|
Deep sequencing reveals a novel class of bidirectional promoters associated with neuronal genes.
|
BMC Genomics
|
2014
|
0.81
|
|
44
|
Accelerated aging-related transcriptome changes in the female prefrontal cortex.
|
Aging Cell
|
2012
|
0.76
|
|
45
|
Mechanisms of dietary response in mice and primates: a role for EGR1 in regulating the reaction to human-specific nutritional content.
|
PLoS One
|
2012
|
0.75
|