Published in J Proteome Res on April 24, 2013
Identification and Quantitation of Coding Variants and Isoforms of Pulmonary Surfactant Protein A. J Proteome Res (2014) 0.80
S-Nitrosylation of Sarcomeric Proteins Depresses Myofilament Ca(2+) Sensitivity in Intact Cardiomyocytes. Antioxid Redox Signal (2015) 0.78
Metabolic hormones, apolipoproteins, adipokines, and cytokines in the alveolar lining fluid of healthy adults: compartmentalization and physiological correlates. PLoS One (2015) 0.76
Bronchoabsorption; a novel bronchoscopic technique to improve biomarker sampling of the airway. Respir Res (2015) 0.76
Bronchopulmonary pharmacokinetics of (R)-salbutamol and (S)-salbutamol enantiomers in pulmonary epithelial lining fluid and lung tissue of horses. Br J Clin Pharmacol (2017) 0.75
Comprehensive Proteomic and Metabolomic Signatures of Nontypeable Haemophilus influenzae-Induced Acute Otitis Media Reveal Bacterial Aerobic Respiration in an Immunosuppressed Environment. Mol Cell Proteomics (2015) 0.75
A gene atlas of the mouse and human protein-encoding transcriptomes. Proc Natl Acad Sci U S A (2004) 44.81
BioGPS: an extensible and customizable portal for querying and organizing gene annotation resources. Genome Biol (2009) 11.17
Estimation of volume of epithelial lining fluid recovered by lavage using urea as marker of dilution. J Appl Physiol (1985) (1986) 6.86
Tracheobronchial foreign bodies: presentation and management in children and adults. Chest (1999) 5.93
Neutrophil granules and secretory vesicles in inflammation. Microbes Infect (2003) 3.56
Local inflammatory responses following bronchial endotoxin instillation in humans. Am J Respir Crit Care Med (2001) 2.28
A comprehensive functional analysis of tissue specificity of human gene expression. BMC Biol (2008) 2.15
Mammalian peptidoglycan recognition protein binds peptidoglycan with high affinity, is expressed in neutrophils, and inhibits bacterial growth. J Biol Chem (2000) 1.99
Recombinant human activated protein C reduces human endotoxin-induced pulmonary inflammation via inhibition of neutrophil chemotaxis. Blood (2004) 1.95
Cathelicidins: a family of endogenous antimicrobial peptides. Curr Opin Hematol (2002) 1.86
Report of ERS Task Force: guidelines for measurement of acellular components and standardization of BAL. Eur Respir J (1999) 1.74
Inter-alpha-trypsin inhibitor, a covalent protein-glycosaminoglycan-protein complex. J Biol Chem (2004) 1.73
Participation of mammalian defensins and cathelicidins in anti-microbial immunity: receptors and activities of human defensins and cathelicidin (LL-37). J Leukoc Biol (2001) 1.73
High predictive accuracy of an unbiased proteomic profile for sustained virologic response in chronic hepatitis C patients. Hepatology (2011) 1.59
Fibroproliferation occurs early in the acute respiratory distress syndrome and impacts on outcome. Am J Respir Crit Care Med (2000) 1.55
Spectral index for assessment of differential protein expression in shotgun proteomics. J Proteome Res (2008) 1.55
Limitations of using urea to quantify epithelial lining fluid recovered by bronchoalveolar lavage. Am Rev Respir Dis (1987) 1.34
Foreign-body aspiration in an adult. Can J Surg (2008) 1.32
Bronchoalveolar lavage as a research tool. Thorax (1991) 1.29
Haptoglobin is synthesized during granulocyte differentiation, stored in specific granules, and released by neutrophils in response to activation. Blood (2006) 1.27
Differential proteomic analysis of bronchoalveolar lavage fluid in asthmatics following segmental antigen challenge. Mol Cell Proteomics (2005) 1.22
Proteomics of bronchoalveolar lavage fluid. J Chromatogr B Analyt Technol Biomed Life Sci (2005) 1.21
Proteomic and computational analysis of bronchoalveolar proteins during the course of the acute respiratory distress syndrome. Am J Respir Crit Care Med (2008) 1.17
Complement levels and activity in the normal and LPS-injured lung. Am J Physiol Lung Cell Mol Physiol (2006) 1.15
Proteomic analysis of inflammatory biomarkers in bronchoalveolar lavage. Proteomics (2006) 1.15
Role of lung apolipoprotein A-I in idiopathic pulmonary fibrosis: antiinflammatory and antifibrotic effect on experimental lung injury and fibrosis. Am J Respir Crit Care Med (2010) 1.13
Proteome analysis of bronchoalveolar lavage in lung diseases. Proteomics (2006) 1.13
Functional and genomic changes induced by alveolar transmigration in human neutrophils. Am J Physiol Lung Cell Mol Physiol (2006) 1.09
Proteomics: current techniques and potential applications to lung disease. Am J Physiol Lung Cell Mol Physiol (2004) 1.08
Protein signature of lung cancer tissues. PLoS One (2012) 1.06
A morphological study of the interaction between Trypanosoma cruzi and rat eosinophils, neutrophils and macrophages in vitro. J Cell Sci (1979) 1.04
Quantitative label-free phosphoproteomics strategy for multifaceted experimental designs. Anal Chem (2011) 1.04
Mapping the lung proteome in cystic fibrosis. J Proteome Res (2009) 1.01
Proteomic profiling of a layered tissue reveals unique glycolytic specializations of photoreceptor cells. Mol Cell Proteomics (2010) 1.01
Pulmonary function, bronchial reactivity, and epithelial permeability are response phenotypes to ozone and develop differentially in healthy humans. J Appl Physiol (1985) (2011) 1.00
1-DE MS and 2-D LC-MS analysis of the mouse bronchoalveolar lavage proteome. Proteomics (2005) 0.98
Characterization of serum proteins associated with IL28B genotype among patients with chronic hepatitis C. PLoS One (2011) 0.98
Of mice and men: comparative proteomics of bronchoalveolar fluid. Eur Respir J (2009) 0.96
Human bronchoalveolar lavage fluid protein two-dimensional database: study of interstitial lung diseases. Electrophoresis (2000) 0.96
Vesicle-associated membrane protein (VAMP) cleavage by a new metalloprotease from the Brazilian scorpion Tityus serrulatus. J Biol Chem (2009) 0.96
Rapid proteome analysis of bronchoalveolar lavage samples of lifelong smokers and never-smokers by micro-scale liquid chromatography and mass spectrometry. Clin Chem (2006) 0.95
Endogenous anti-inflammatory substances, inter-alpha-inhibitor and bikunin. Biol Chem (2006) 0.93
Database of bronchoalveolar lavage fluid proteins. J Chromatogr B Analyt Technol Biomed Life Sci (2002) 0.92
Protein expression patterns associated with progression of chronic obstructive pulmonary disease in bronchoalveolar lavage of smokers. Clin Chem (2007) 0.92
Interlobar variation in the recovery of bronchoalveolar lavage fluid, cell populations, and angiotensin-converting enzyme in normal volunteers. J Lab Clin Med (1993) 0.92
Proteomic analysis of proteins from bronchoalveolar lavage fluid reveals the action mechanism of ultrafine carbon black-induced lung injury in mice. Proteomics (2007) 0.90
Human bronchoalveolar lavage: biofluid analysis with special emphasis on sample preparation. Proteomics (2003) 0.90
Changes in bronchoalveolar lavage fluid proteins in sarcoidosis: a proteomics approach. Eur Respir J (2003) 0.89
The clinical and environmental determinants of airway transcriptional profiles in allergic asthma. Am J Respir Crit Care Med (2012) 0.88
Human neutrophils store type II 14-kDa phospholipase A2 in granules and secrete active enzyme in response to soluble stimuli. Biochem Biophys Res Commun (1995) 0.87
Bronchoalveolar lavage fluid proteins in human lung disease: analysis by two-dimensional electrophoresis. Electrophoresis (1993) 0.86
The impact of surfactant protein-A on ozone-induced changes in the mouse bronchoalveolar lavage proteome. Proteome Sci (2009) 0.85
A label-free differential proteomic analysis of mouse bronchoalveolar lavage fluid exposed to ultrafine carbon black. Anal Chim Acta (2010) 0.84
Leukocytic cell sources of airway tissue kallikrein. Am J Physiol Lung Cell Mol Physiol (2003) 0.84
Proteome analysis of bronchoalveolar lavage fluid in chronic hypersensitivity pneumonitis. Allergol Int (2011) 0.83
Differential proteomic analysis of bronchoalveolar lavage fluid from lung transplant patients with and without chronic graft dysfunction. Clin Biochem (2011) 0.83
Life's simple measures: unlocking the proteome. J Mol Biol (2012) 0.83
Bikunin inhibits lipopolysaccharide-induced tumor necrosis factor alpha induction in macrophages. Clin Diagn Lab Immunol (2004) 0.82
Alterations in the human lung proteome with lipopolysaccharide. BMC Pulm Med (2009) 0.81
Metaprotein expression modeling for label-free quantitative proteomics. BMC Bioinformatics (2012) 0.81
Bronchoalveolar lavage fluid proteomic patterns of sulfur mustard-exposed patients. Proteomics Clin Appl (2009) 0.80
Ca(2+)-dependent binding of annexin IV to surfactant protein A and lamellar bodies in alveolar type II cells. Biochem J (1995) 0.80
Binding of annexins to lung lamellar bodies and the PMA-stimulated secretion of annexin V from alveolar type II cells. J Biochem (2001) 0.79
Proteomics: is it an approach to understand the progression of chronic lung disorders? J Proteome Res (2004) 0.78
A quantitative proteomic analysis of soluble bronchoalveolar fluid proteins from patients with sarcoidosis and chronic beryllium disease. Sarcoidosis Vasc Diffuse Lung Dis (2007) 0.78
2-DE and LC-MS/MS for a comparative proteomic analysis of BALf from subjects with different subsets of inflammatory myopathies. J Proteome Res (2009) 0.78
Distribution dynamics of perfluorocarbon delivery to the lungs: an intact rabbit model. J Appl Physiol (1985) (2003) 0.78
Eosinophil activity in bronchial asthma. Allergy Proc (1994) 0.77
Proteomic analysis of bronchoalveolar lavage fluid proteins from mice infected with Francisella tularensis ssp. novicida. J Proteome Res (2012) 0.77
Bikunin suppresses expression of pro-inflammatory cytokines induced by lipopolysaccharide in neutrophils. J Endotoxin Res (2007) 0.77
Proteomics and the lung: Analysis of bronchoalveolar lavage fluid. Proteomics Clin Appl (2009) 0.76
Protein S-nitrosylation: purview and parameters. Nat Rev Mol Cell Biol (2005) 10.65
A common MUC5B promoter polymorphism and pulmonary fibrosis. N Engl J Med (2011) 6.40
Standardizing global gene expression analysis between laboratories and across platforms. Nat Methods (2005) 6.23
A placebo-controlled trial of interferon gamma-1b in patients with idiopathic pulmonary fibrosis. N Engl J Med (2004) 6.02
Toll-like receptor 4 polymorphisms and atherogenesis. N Engl J Med (2002) 6.00
Loss-of-function mutation in tryptophan hydroxylase-2 identified in unipolar major depression. Neuron (2005) 4.78
Heterozygosity for a surfactant protein C gene mutation associated with usual interstitial pneumonitis and cellular nonspecific interstitial pneumonitis in one kindred. Am J Respir Crit Care Med (2002) 4.66
Toll-like receptors in the pathogenesis of human disease. Nat Immunol (2004) 4.40
Clinical and pathologic features of familial interstitial pneumonia. Am J Respir Crit Care Med (2005) 4.25
The clinical course of patients with idiopathic pulmonary fibrosis. Ann Intern Med (2005) 4.25
Relevance of mutations in the TLR4 receptor in patients with gram-negative septic shock. Arch Intern Med (2002) 4.00
Essential roles of S-nitrosothiols in vascular homeostasis and endotoxic shock. Cell (2004) 3.98
In utero supplementation with methyl donors enhances allergic airway disease in mice. J Clin Invest (2008) 3.35
Gene expression profiling of familial and sporadic interstitial pneumonia. Am J Respir Crit Care Med (2006) 3.32
Genetic analysis of complex traits in the emerging Collaborative Cross. Genome Res (2011) 3.25
Genome-wide association study identifies multiple susceptibility loci for pulmonary fibrosis. Nat Genet (2013) 3.17
Protection from experimental asthma by an endogenous bronchodilator. Science (2005) 3.17
Proteomic analysis of S-nitrosylation and denitrosylation by resin-assisted capture. Nat Biotechnol (2009) 2.69
Regulation of beta-adrenergic receptor signaling by S-nitrosylation of G-protein-coupled receptor kinase 2. Cell (2007) 2.65
Allergen-induced airway disease is mouse strain dependent. Am J Physiol Lung Cell Mol Physiol (2003) 2.56
The role of innate immunity in acute allograft rejection after lung transplantation. Am J Respir Crit Care Med (2003) 2.44
The role of Toll-like receptor 4 in environmental airway injury in mice. Am J Respir Crit Care Med (2004) 2.43
Retracted Alveolar macrophages from overweight/obese subjects with asthma demonstrate a proinflammatory phenotype. Am J Respir Crit Care Med (2012) 2.39
MUC5B promoter polymorphism and interstitial lung abnormalities. N Engl J Med (2013) 2.31
Exposures to the Kuwait oil fires and their association with asthma and bronchitis among gulf war veterans. Environ Health Perspect (2002) 2.24
An integrated clinico-metabolomic model improves prediction of death in sepsis. Sci Transl Med (2013) 2.23
Association between the MUC5B promoter polymorphism and survival in patients with idiopathic pulmonary fibrosis. JAMA (2013) 2.20
The role of bacteria in the pathogenesis and progression of idiopathic pulmonary fibrosis. Am J Respir Crit Care Med (2014) 2.17
Radiologic findings are strongly associated with a pathologic diagnosis of usual interstitial pneumonia. Chest (2003) 2.16
Multi-platform, multi-site, microarray-based human tumor classification. Am J Pathol (2004) 2.14
Concern TLR4 is necessary for hyaluronan-mediated airway hyperresponsiveness after ozone inhalation. Am J Respir Crit Care Med (2009) 2.07
The pathophysiology of asthma. Annu Rev Med (2002) 1.98
A prospective multicenter study of competency metrics and educational interventions in the learning of bronchoscopy among new pulmonary fellows. Chest (2009) 1.97
The acute respiratory distress syndrome. Ann Intern Med (2004) 1.96
High-resolution computed tomography in idiopathic pulmonary fibrosis: diagnosis and prognosis. Am J Respir Crit Care Med (2005) 1.90
Beta-arrestin-2 regulates the development of allergic asthma. J Clin Invest (2003) 1.85
Specificity and complexity of the Caenorhabditis elegans innate immune response. Mol Cell Biol (2007) 1.78
The idiopathic pulmonary fibrosis honeycomb cyst contains a mucocilary pseudostratified epithelium. PLoS One (2013) 1.78
Expression of cilium-associated genes defines novel molecular subtypes of idiopathic pulmonary fibrosis. Thorax (2013) 1.77
Site-specific analysis of protein S-acylation by resin-assisted capture. J Lipid Res (2010) 1.77
Future research directions in idiopathic pulmonary fibrosis: summary of a National Heart, Lung, and Blood Institute working group. Am J Respir Crit Care Med (2002) 1.76
Toll-like receptor 4 mediates mitochondrial DNA damage and biogenic responses after heat-inactivated E. coli. FASEB J (2005) 1.72
Epigenetic mechanisms and the development of asthma. J Allergy Clin Immunol (2012) 1.67
Routine vs. selective EUS-guided FNA approach for preoperative nodal staging of esophageal carcinoma. Gastrointest Endosc (2006) 1.67
Relationship of DNA methylation and gene expression in idiopathic pulmonary fibrosis. Am J Respir Crit Care Med (2014) 1.63
NOS2 regulation of NF-kappaB by S-nitrosylation of p65. J Biol Chem (2007) 1.62
Analyses of efficacy end points in a controlled trial of interferon-gamma1b for idiopathic pulmonary fibrosis. Chest (2005) 1.60
High predictive accuracy of an unbiased proteomic profile for sustained virologic response in chronic hepatitis C patients. Hepatology (2011) 1.59
Downregulation of c-FLIP sensitizes DU145 prostate cancer cells to Fas-mediated apoptosis. Cancer Biol Ther (2002) 1.58
Abl family kinases modulate T cell-mediated inflammation and chemokine-induced migration through the adaptor HEF1 and the GTPase Rap1. Sci Signal (2012) 1.57
Gulf War veterans with anxiety: prevalence, comorbidity, and risk factors. Epidemiology (2004) 1.57
Molecular phenotypes distinguish patients with relatively stable from progressive idiopathic pulmonary fibrosis (IPF). PLoS One (2009) 1.56
Hyaluronan mediates ozone-induced airway hyperresponsiveness in mice. J Biol Chem (2009) 1.55
Rescue therapy in adult and pediatric patients with pH1N1 influenza infection: a tertiary center intensive care unit experience from April to October 2009. Crit Care Med (2010) 1.55
Future directions in idiopathic pulmonary fibrosis research. An NHLBI workshop report. Am J Respir Crit Care Med (2014) 1.54
Association of calcineurin with the COPI protein Sec28 and the COPII protein Sec13 revealed by quantitative proteomics. PLoS One (2011) 1.52
Chronic LPS inhalation causes emphysema-like changes in mouse lung that are associated with apoptosis. Am J Respir Cell Mol Biol (2008) 1.51
Quantitative proteomics reveals metabolic and pathogenic properties of Chlamydia trachomatis developmental forms. Mol Microbiol (2011) 1.51
Comb-p: software for combining, analyzing, grouping and correcting spatially correlated P-values. Bioinformatics (2012) 1.49
The critical role of hematopoietic cells in lipopolysaccharide-induced airway inflammation. Am J Respir Crit Care Med (2004) 1.48
Retracted Nitric oxide mediates relative airway hyporesponsiveness to lipopolysaccharide in surfactant protein A-deficient mice. Am J Respir Cell Mol Biol (2010) 1.44
Restraint of apoptosis during mitosis through interdomain phosphorylation of caspase-2. EMBO J (2009) 1.42
Association between the Asp299Gly polymorphisms in the Toll-like receptor 4 and premature births in the Finnish population. Pediatr Res (2002) 1.39
TLR4 signaling attenuates ongoing allergic inflammation. J Immunol (2006) 1.38
Exploiting the complementary nature of LC/MALDI/MS/MS and LC/ESI/MS/MS for increased proteome coverage. J Am Soc Mass Spectrom (2003) 1.37
The protein expression landscape of the Arabidopsis root. Proc Natl Acad Sci U S A (2012) 1.36
Posttraumatic stress disorder and self-reported physical health status among U.S. Military personnel serving during the Gulf War period: a population-based study. Psychosomatics (2002) 1.33
Urine PGE-M: A metabolite of prostaglandin E2 as a potential biomarker of advanced colorectal neoplasia. Clin Gastroenterol Hepatol (2006) 1.32
Innate immunity influences long-term outcomes after human lung transplant. Am J Respir Crit Care Med (2005) 1.31
Plasminogen alleles influence susceptibility to invasive aspergillosis. PLoS Genet (2008) 1.25
Neutrophil transmigration triggers repair of the lung epithelium via beta-catenin signaling. Proc Natl Acad Sci U S A (2011) 1.25
Epigenetic control of gene expression in the lung. Am J Respir Crit Care Med (2011) 1.24
Neutrophils play a critical role in development of LPS-induced airway disease. Am J Physiol Lung Cell Mol Physiol (2002) 1.23
Identification of S-nitrosylated targets of thioredoxin using a quantitative proteomic approach. Biochemistry (2010) 1.23
Survival defects of Cryptococcus neoformans mutants exposed to human cerebrospinal fluid result in attenuated virulence in an experimental model of meningitis. Infect Immun (2010) 1.22
Identification of novel genes that mediate innate immunity using inbred mice. Genetics (2009) 1.22
The MUC5B variant is associated with idiopathic pulmonary fibrosis but not with systemic sclerosis interstitial lung disease in the European Caucasian population. PLoS One (2013) 1.21
Ambient ozone primes pulmonary innate immunity in mice. J Immunol (2007) 1.21
Toll-like receptor 4 (TLR4)-deficient murine macrophage cell line as an in vitro assay system to show TLR4-independent signaling of Bacteroides fragilis lipopolysaccharide. Infect Immun (2002) 1.21
Small bowel adenocarcinoma complicating Crohn's disease: case series and review of the literature. Am Surg (2007) 1.21
Susceptibility to asbestos-induced and transforming growth factor-beta1-induced fibroproliferative lung disease in two strains of mice. Am J Respir Cell Mol Biol (2002) 1.19
Complement levels and activity in the normal and LPS-injured lung. Am J Physiol Lung Cell Mol Physiol (2006) 1.15
Rare variants in RTEL1 are associated with familial interstitial pneumonia. Am J Respir Crit Care Med (2015) 1.15
Emerging treatments for complex perianal fistula in Crohn's disease. World J Gastroenterol (2009) 1.15
Inter-alpha-trypsin inhibitor attenuates complement activation and complement-induced lung injury. J Immunol (2007) 1.14
Ozone-induced acute pulmonary injury in inbred mouse strains. Am J Respir Cell Mol Biol (2004) 1.14
Genetic basis of murine responses to hyperoxia-induced lung injury. Immunogenetics (2006) 1.13
Both hematopoietic-derived and non-hematopoietic-derived {beta}-arrestin-2 regulates murine allergic airway disease. Am J Respir Cell Mol Biol (2009) 1.12