Bck2 acts through the MADS box protein Mcm1 to activate cell-cycle-regulated genes in budding yeast.

PubWeight™: 0.84‹?›

🔗 View Article (PMC 3649975)

Published in PLoS Genet on May 09, 2013

Authors

Nazareth Bastajian1, Helena Friesen, Brenda J Andrews

Author Affiliations

1: The Donnelly Centre and the Department of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada.

Articles cited by this

Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization. Mol Biol Cell (1998) 62.20

Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature (2002) 37.66

Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis. Science (1999) 36.25

Global analysis of protein expression in yeast. Nature (2003) 34.15

Towards a proteome-scale map of the human protein-protein interaction network. Nature (2005) 24.76

Designer deletion strains derived from Saccharomyces cerevisiae S288C: a useful set of strains and plasmids for PCR-mediated gene disruption and other applications. Yeast (1998) 23.00

A genome-wide transcriptional analysis of the mitotic cell cycle. Mol Cell (1998) 19.67

The genetic landscape of a cell. Science (2010) 16.52

High-quality binary protein interaction map of the yeast interactome network. Science (2008) 10.65

Cyclin-dependent kinases: engines, clocks, and microprocessors. Annu Rev Cell Dev Biol (1997) 9.87

TOR controls translation initiation and early G1 progression in yeast. Mol Biol Cell (1996) 8.03

Biochemical and genetic analysis of the yeast proteome with a movable ORF collection. Genes Dev (2005) 6.14

A global protein kinase and phosphatase interaction network in yeast. Science (2010) 5.95

Transcriptional regulation and function during the human cell cycle. Nat Genet (2001) 5.89

Global analysis of Cdk1 substrate phosphorylation sites provides insights into evolution. Science (2009) 5.37

Analysis of phosphorylation sites on proteins from Saccharomyces cerevisiae by electron transfer dissociation (ETD) mass spectrometry. Proc Natl Acad Sci U S A (2007) 5.09

Global analysis of the genetic network controlling a bacterial cell cycle. Science (2000) 4.77

The MADS-box family of transcription factors. Eur J Biochem (1995) 4.54

Two yeast forkhead genes regulate the cell cycle and pseudohyphal growth. Nature (2000) 4.52

Ternary complex factors: growth factor regulated transcriptional activators. Curr Opin Genet Dev (1994) 4.46

The myocardin family of transcriptional coactivators: versatile regulators of cell growth, migration, and myogenesis. Genes Dev (2006) 4.18

Tor proteins and protein phosphatase 2A reciprocally regulate Tap42 in controlling cell growth in yeast. EMBO J (1999) 3.63

Yap, a novel family of eight bZIP proteins in Saccharomyces cerevisiae with distinct biological functions. Mol Cell Biol (1997) 3.55

A protein involved in minichromosome maintenance in yeast binds a transcriptional enhancer conserved in eukaryotes. Genes Dev (1989) 3.41

Global control of cell-cycle transcription by coupled CDK and network oscillators. Nature (2008) 3.32

A novel Mcm1-dependent element in the SWI4, CLN3, CDC6, and CDC47 promoters activates M/G1-specific transcription. Genes Dev (1997) 3.28

The cell cycle-regulated genes of Schizosaccharomyces pombe. PLoS Biol (2005) 2.86

Mcm1 is required to coordinate G2-specific transcription in Saccharomyces cerevisiae. Mol Cell Biol (1995) 2.85

G1 cyclin turnover and nutrient uptake are controlled by a common pathway in yeast. Genes Dev (1995) 2.77

Forkhead-like transcription factors recruit Ndd1 to the chromatin of G2/M-specific promoters. Nature (2000) 2.74

Conserved homeodomain proteins interact with MADS box protein Mcm1 to restrict ECB-dependent transcription to the M/G1 phase of the cell cycle. Genes Dev (2002) 2.52

Crystal structure of the yeast MATalpha2/MCM1/DNA ternary complex. Nature (1998) 2.42

Phosphoproteomic analysis reveals interconnected system-wide responses to perturbations of kinases and phosphatases in yeast. Sci Signal (2010) 2.36

Inactivation of the protein phosphatase 2A regulatory subunit A results in morphological and transcriptional defects in Saccharomyces cerevisiae. Mol Cell Biol (1992) 2.33

Forkhead transcription factors, Fkh1p and Fkh2p, collaborate with Mcm1p to control transcription required for M-phase. Curr Biol (2000) 2.31

Cell cycle-dependent transcription in yeast: promoters, transcription factors, and transcriptomes. Oncogene (2005) 2.26

Systematic exploration of essential yeast gene function with temperature-sensitive mutants. Nat Biotechnol (2011) 2.26

SIT4 protein phosphatase is required for the normal accumulation of SWI4, CLN1, CLN2, and HCS26 RNAs during late G1. Genes Dev (1992) 2.17

Std1 and Mth1 proteins interact with the glucose sensors to control glucose-regulated gene expression in Saccharomyces cerevisiae. Mol Cell Biol (1999) 2.11

A pair of functionally redundant yeast genes (PPZ1 and PPZ2) encoding type 1-related protein phosphatases function within the PKC1-mediated pathway. Mol Cell Biol (1993) 2.06

Structural and functional analysis of yeast putative adaptors. Evidence for an adaptor complex in vivo. J Biol Chem (1996) 2.01

The forkhead protein Fkh2 is a component of the yeast cell cycle transcription factor SFF. EMBO J (2000) 1.95

Genes that can bypass the CLN requirement for Saccharomyces cerevisiae cell cycle START. Mol Cell Biol (1994) 1.95

Functional domains of the yeast transcription/replication factor MCM1. Genes Dev (1991) 1.90

The yeast histidine protein kinase, Sln1p, mediates phosphotransfer to two response regulators, Ssk1p and Skn7p. EMBO J (1998) 1.90

Activation of CLN1 and CLN2 G1 cyclin gene expression by BCK2. Mol Cell Biol (1995) 1.78

Approaching a complete repository of sequence-verified protein-encoding clones for Saccharomyces cerevisiae. Genome Res (2007) 1.75

NDD1, a high-dosage suppressor of cdc28-1N, is essential for expression of a subset of late-S-phase-specific genes in Saccharomyces cerevisiae. Mol Cell Biol (1999) 1.75

A competitive transcription factor binding mechanism determines the timing of late cell cycle-dependent gene expression. Mol Cell (2010) 1.74

SRF and MCM1 have related but distinct DNA binding specificities. Nucleic Acids Res (1992) 1.67

Yeast putative transcription factors involved in salt tolerance. FEBS Lett (1998) 1.62

Cell cycle-dependent transcription of CLN2 is conferred by multiple distinct cis-acting regulatory elements. Mol Cell Biol (1994) 1.58

Altered transcription in yeast expressing expanded polyglutamine. Proc Natl Acad Sci U S A (2001) 1.58

Reciprocal regulation of anaerobic and aerobic cell wall mannoprotein gene expression in Saccharomyces cerevisiae. J Bacteriol (2001) 1.57

The SRF and MCM1 transcription factors. Curr Opin Genet Dev (1992) 1.54

Genetic analysis of the shared role of CLN3 and BCK2 at the G(1)-S transition in Saccharomyces cerevisiae. Genetics (1999) 1.54

The TOR signal transduction cascade controls cellular differentiation in response to nutrients. Mol Biol Cell (2001) 1.53

High-resolution transcription atlas of the mitotic cell cycle in budding yeast. Genome Biol (2010) 1.51

Multiple sequence-specific factors generate the nucleosome-depleted region on CLN2 promoter. Mol Cell (2011) 1.49

Repression of transcription by Rgt1 in the absence of glucose requires Std1 and Mth1. Curr Genet (2003) 1.47

Regulation of cell cycle-specific gene expression through cyclin-dependent kinase-mediated phosphorylation of the forkhead transcription factor Fkh2p. Mol Cell Biol (2004) 1.46

Recruitment of Thr 319-phosphorylated Ndd1p to the FHA domain of Fkh2p requires Clb kinase activity: a mechanism for CLB cluster gene activation. Genes Dev (2003) 1.45

Polo kinase controls cell-cycle-dependent transcription by targeting a coactivator protein. Nature (2006) 1.42

Cell cycle-regulated transcription through the FHA domain of Fkh2p and the coactivator Ndd1p. Curr Biol (2003) 1.37

Molecular determinants of the cell-cycle regulated Mcm1p-Fkh2p transcription factor complex. Nucleic Acids Res (2003) 1.26

Characterization of the ECB binding complex responsible for the M/G(1)-specific transcription of CLN3 and SWI4. Mol Cell Biol (2002) 1.25

Human CPR (cell cycle progression restoration) genes impart a Far- phenotype on yeast cells. Genetics (1997) 1.25

Two glucose-sensing pathways converge on Rgt1 to regulate expression of glucose transporter genes in Saccharomyces cerevisiae. J Biol Chem (2006) 1.22

Shifted Transversal Design smart-pooling for high coverage interactome mapping. Genome Res (2009) 1.22

Early cell cycle box-mediated transcription of CLN3 and SWI4 contributes to the proper timing of the G(1)-to-S transition in budding yeast. Mol Cell Biol (2001) 1.21

Transcriptional activators in yeast. Nucleic Acids Res (2006) 1.20

Defining the budding yeast chromatin-associated interactome. Mol Syst Biol (2010) 1.19

Combined analysis reveals a core set of cycling genes. Genome Biol (2007) 1.10

Interactions of the Mcm1 MADS box protein with cofactors that regulate mating in yeast. Mol Cell Biol (2002) 1.09

Identification of multicopy suppressors of cell cycle arrest at the G1-S transition in Saccharomyces cerevisiae. Yeast (2003) 0.95

Bck2 is a phase-independent activator of cell cycle-regulated genes in yeast. Cell Cycle (2009) 0.94

Protein kinase C regulates late cell cycle-dependent gene expression. Mol Cell Biol (2012) 0.86

KNR4 is a member of the PKC1 signalling pathway and genetically interacts with BCK2, a gene involved in cell cycle progression in Saccharomyces cerevisiae. Curr Genet (2002) 0.81

Cbk1 kinase and Bck2 control MAP kinase activation and inactivation during heat shock. Mol Biol Cell (2011) 0.79

Articles by these authors

Global mapping of the yeast genetic interaction network. Science (2004) 21.34

The genetic landscape of a cell. Science (2010) 16.52

Exploring genetic interactions and networks with yeast. Nat Rev Genet (2007) 5.67

Exploration of essential gene functions via titratable promoter alleles. Cell (2004) 5.21

The synthetic genetic interaction spectrum of essential genes. Nat Genet (2005) 3.06

eSGA: E. coli synthetic genetic array analysis. Nat Methods (2008) 3.01

Deciphering protein kinase specificity through large-scale analysis of yeast phosphorylation site motifs. Sci Signal (2010) 2.95

Identifying transcription factor functions and targets by phenotypic activation. Proc Natl Acad Sci U S A (2006) 2.39

Direct regulation of Arp2/3 complex activity and function by the actin binding protein coronin. J Cell Biol (2002) 2.17

Significant conservation of synthetic lethal genetic interaction networks between distantly related eukaryotes. Proc Natl Acad Sci U S A (2008) 2.01

Systematic exploration of synergistic drug pairs. Mol Syst Biol (2011) 1.89

The budding yeast nuclear envelope adjacent to the nucleolus serves as a membrane sink during mitotic delay. Curr Biol (2012) 1.65

An integrated approach to characterize genetic interaction networks in yeast metabolism. Nat Genet (2011) 1.62

Yeast Barcoders: a chemogenomic application of a universal donor-strain collection carrying bar-code identifiers. Nat Methods (2008) 1.56

Global map of SUMO function revealed by protein-protein interaction and genetic networks. Mol Cell (2009) 1.55

Pho85, a multifunctional cyclin-dependent protein kinase in budding yeast. Mol Microbiol (2007) 1.44

DRYGIN: a database of quantitative genetic interaction networks in yeast. Nucleic Acids Res (2009) 1.41

Integrating high-throughput genetic interaction mapping and high-content screening to explore yeast spindle morphogenesis. J Cell Biol (2010) 1.36

Bringing order to protein disorder through comparative genomics and genetic interactions. Genome Biol (2011) 1.34

Components of the ESCRT pathway, DFG16, and YGR122w are required for Rim101 to act as a corepressor with Nrg1 at the negative regulatory element of the DIT1 gene of Saccharomyces cerevisiae. Mol Cell Biol (2005) 1.33

Two-color cell array screen reveals interdependent roles for histone chaperones and a chromatin boundary regulator in histone gene repression. Mol Cell (2009) 1.24

Putting genetic interactions in context through a global modular decomposition. Genome Res (2011) 1.24

Protein-protein interaction affinity plays a crucial role in controlling the Sho1p-mediated signal transduction pathway in yeast. Mol Cell (2004) 1.24

Activation of the Cdc42p GTPase by cyclin-dependent protein kinases in budding yeast. EMBO J (2007) 1.20

Proteome-wide discovery of evolutionary conserved sequences in disordered regions. Sci Signal (2012) 1.15

Dissecting BAR domain function in the yeast Amphiphysins Rvs161 and Rvs167 during endocytosis. Mol Biol Cell (2010) 1.14

SGAtools: one-stop analysis and visualization of array-based genetic interaction screens. Nucleic Acids Res (2013) 1.10

Q&A: epistasis. J Biol (2009) 1.10

Global functional map of the p23 molecular chaperone reveals an extensive cellular network. Mol Cell (2011) 1.09

The biologically relevant targets and binding affinity requirements for the function of the yeast actin-binding protein 1 Src-homology 3 domain vary with genetic context. Genetics (2007) 1.05

Exploring the yeast acetylome using functional genomics. Cell (2012) 1.05

Functional analysis with a barcoder yeast gene overexpression system. G3 (Bethesda) (2012) 1.02

Linking the kinome and phosphorylome--a comprehensive review of approaches to find kinase targets. Mol Biosyst (2008) 0.99

Phenotypic activation to discover biological pathways and kinase substrates. Cell Cycle (2006) 0.99

Protein complexes are central in the yeast genetic landscape. PLoS Comput Biol (2011) 0.99

Dual regulation by pairs of cyclin-dependent protein kinases and histone deacetylases controls G1 transcription in budding yeast. PLoS Biol (2009) 0.98

Global analysis of SUMO chain function reveals multiple roles in chromatin regulation. J Cell Biol (2013) 0.98

Clathrin light chain directs endocytosis by influencing the binding of the yeast Hip1R homologue, Sla2, to F-actin. Mol Biol Cell (2011) 0.98

Conserved rules govern genetic interaction degree across species. Genome Biol (2012) 0.95

A quantitative literature-curated gold standard for kinase-substrate pairs. Genome Biol (2011) 0.95

A picture is worth a thousand words: genomics to phenomics in the yeast Saccharomyces cerevisiae. FEBS Lett (2009) 0.94

Functional wiring of the yeast kinome revealed by global analysis of genetic network motifs. Genome Res (2012) 0.93

Regulation of cell polarity through phosphorylation of Bni4 by Pho85 G1 cyclin-dependent kinases in Saccharomyces cerevisiae. Mol Biol Cell (2009) 0.90

Unsupervised clustering of subcellular protein expression patterns in high-throughput microscopy images reveals protein complexes and functional relationships between proteins. PLoS Comput Biol (2013) 0.88

Restriction of histone gene transcription to S phase by phosphorylation of a chromatin boundary protein. Genes Dev (2011) 0.85

Playing tag with the yeast proteome. Nat Biotechnol (2003) 0.83

Synthetic genetic array analysis for global mapping of genetic networks in yeast. Methods Mol Biol (2014) 0.81

Dual functions of Mdt1 in genome maintenance and cell integrity pathways in Saccharomyces cerevisiae. Yeast (2010) 0.80

Exploring the conservation of synthetic lethal genetic interaction networks. Commun Integr Biol (2009) 0.78

eIF5A has a function in the cotranslational translocation of proteins into the ER. Amino Acids (2013) 0.78

Reporter-based synthetic genetic array analysis: a functional genomics approach for investigating the cell cycle in Saccharomyces cerevisiae. Methods Mol Biol (2009) 0.76

GSA Launches G3: Genes | Genomes | Genetics. G3 (Bethesda) (2011) 0.76

Yeast functional genomics and cell biology: no longer in the dark. Genome Biol (2003) 0.76

HeLa sequencing and genomic privacy: the next chapter. G3 (Bethesda) (2013) 0.75

G3, GENETICS, and the GSA: Two Journals, One Mission. Genetics (2011) 0.75