WOX11 and 12 are involved in the first-step cell fate transition during de novo root organogenesis in Arabidopsis.

PubWeight™: 1.30‹?› | Rank: Top 10%

🔗 View Article (PMC 4001370)

Published in Plant Cell on March 18, 2014

Authors

Jingchun Liu1, Lihong Sheng, Yingqiang Xu, Jiqin Li, Zhongnan Yang, Hai Huang, Lin Xu

Author Affiliations

1: National Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200032, China.

Articles citing this

A simple method suitable to study de novo root organogenesis. Front Plant Sci (2014) 0.93

Root Regeneration Triggers an Embryo-like Sequence Guided by Hormonal Interactions. Cell (2016) 0.86

The GRAS gene family in pine: transcript expression patterns associated with the maturation-related decline of competence to form adventitious roots. BMC Plant Biol (2014) 0.86

Translatome analyses capture of opposing tissue-specific brassinosteroid signals orchestrating root meristem differentiation. Proc Natl Acad Sci U S A (2015) 0.85

YUCCA-mediated auxin biogenesis is required for cell fate transition occurring during de novo root organogenesis in Arabidopsis. J Exp Bot (2016) 0.84

Origin and development of the root cap in rice. Plant Physiol (2014) 0.82

Transcription Factors WOX11/12 Directly Activate WOX5/7 to Promote Root Primordia Initiation and Organogenesis. Plant Physiol (2016) 0.82

Auxin-Independent NAC Pathway Acts in Response to Explant-Specific Wounding and Promotes Root Tip Emergence during de Novo Root Organogenesis in Arabidopsis. Plant Physiol (2016) 0.81

Two-Step Regulation of a Meristematic Cell Population Acting in Shoot Branching in Arabidopsis. PLoS Genet (2016) 0.78

Externally imposed electric field enhances plant root tip regeneration. Regeneration (Oxf) (2016) 0.78

WIND1 promotes shoot regeneration through transcriptional activation of ENHANCER OF SHOOT REGENERATION1 in Arabidopsis. Plant Cell (2016) 0.77

Direct reprogramming of adult somatic cells toward adventitious root formation in forest tree species: the effect of the juvenile-adult transition. Front Plant Sci (2014) 0.77

Endogenous auxin biosynthesis and de novo root organogenesis. J Exp Bot (2016) 0.77

Non-canonical WOX11-mediated root branching contributes to plasticity in Arabidopsis root system architecture. Development (2017) 0.77

Promoting Roles of Melatonin in Adventitious Root Development of Solanum lycopersicum L. by Regulating Auxin and Nitric Oxide Signaling. Front Plant Sci (2016) 0.75

De novo assembly of plant body plan: a step ahead of Deadpool. Regeneration (Oxf) (2016) 0.75

Epigenetic memory and cell fate reprogramming in plants. Regeneration (Oxf) (2017) 0.75

Getting to the root of regeneration: adventitious rooting and callus formation. Plant Cell (2014) 0.75

Chrysanthemum transcription factor CmLBD1 direct lateral root formation in Arabidopsis thaliana. Sci Rep (2016) 0.75

RIMA-Dependent Nuclear Accumulation of IYO Triggers Auxin-Irreversible Cell Differentiation in Arabidopsis. Plant Cell (2017) 0.75

Wound signaling: The missing link in plant regeneration. Plant Signal Behav (2016) 0.75

Divergent regeneration-competent cells adopt a common mechanism for callus initiation in angiosperms. Regeneration (Oxf) (2017) 0.75

High miR156 Expression Is Required for Auxin-Induced Adventitious Root Formation via MxSPL26 Independent of PINs and ARFs in Malus xiaojinensis. Front Plant Sci (2017) 0.75

The TOR Pathway Is Involved in Adventitious Root Formation in Arabidopsis and Potato. Front Plant Sci (2017) 0.75

Molecular Transducers from Roots Are Triggered in Arabidopsis Leaves by Root-Knot Nematodes for Successful Feeding Site Formation: A Conserved Post-Embryogenic De novo Organogenesis Program? Front Plant Sci (2017) 0.75

The ISWI remodeler in plants: protein complexes, biochemical functions, and developmental roles. Chromosoma (2017) 0.75

Articles cited by this

Genome-wide insertional mutagenesis of Arabidopsis thaliana. Science (2003) 39.19

Nutrient requirements of suspension cultures of soybean root cells. Exp Cell Res (1968) 30.19

Aux/IAA proteins repress expression of reporter genes containing natural and highly active synthetic auxin response elements. Plant Cell (1997) 11.61

Technical advance: An estrogen receptor-based transactivator XVE mediates highly inducible gene expression in transgenic plants. Plant J (2000) 6.02

A pathway for lateral root formation in Arabidopsis thaliana. Genes Dev (1995) 5.92

Dominant repression of target genes by chimeric repressors that include the EAR motif, a repression domain, in Arabidopsis. Plant J (2003) 4.49

Functional genomic analysis of the AUXIN RESPONSE FACTOR gene family members in Arabidopsis thaliana: unique and overlapping functions of ARF7 and ARF19. Plant Cell (2005) 4.41

Two independent and polarized processes of cell elongation regulate leaf blade expansion in Arabidopsis thaliana (L.) Heynh. Development (1996) 4.36

Expression dynamics of WOX genes mark cell fate decisions during early embryonic patterning in Arabidopsis thaliana. Development (2004) 3.93

Conserved factors regulate signalling in Arabidopsis thaliana shoot and root stem cell organizers. Nature (2007) 3.84

ARF7 and ARF19 regulate lateral root formation via direct activation of LBD/ASL genes in Arabidopsis. Plant Cell (2007) 3.28

Interaction of Polycomb-group proteins controlling flowering in Arabidopsis. Development (2004) 2.87

Slicing across kingdoms: regeneration in plants and animals. Cell (2008) 2.18

Novel as1 and as2 defects in leaf adaxial-abaxial polarity reveal the requirement for ASYMMETRIC LEAVES1 and 2 and ERECTA functions in specifying leaf adaxial identity. Development (2003) 2.17

Arabidopsis regeneration from multiple tissues occurs via a root development pathway. Dev Cell (2010) 2.12

The WUSCHEL-related homeobox gene WOX11 is required to activate shoot-borne crown root development in rice. Plant Cell (2009) 1.74

Structure and functions of the vascular cambium. C R Acad Sci III (1999) 1.68

Regeneration in plants and animals: dedifferentiation, transdifferentiation, or just differentiation? Trends Cell Biol (2011) 1.61

Plant callus: mechanisms of induction and repression. Plant Cell (2013) 1.48

A turanose-insensitive mutant suggests a role for WOX5 in auxin homeostasis in Arabidopsis thaliana. Plant J (2005) 1.47

Pluripotency of Arabidopsis xylem pericycle underlies shoot regeneration from root and hypocotyl explants grown in vitro. Plant J (2008) 1.37

Molecular physiology of adventitious root formation in Petunia hybrida cuttings: involvement of wound response and primary metabolism. New Phytol (2008) 1.32

Genetic and epigenetic controls of plant regeneration. Curr Top Dev Biol (2014) 1.30

Developmental steps in acquiring competence for shoot development in Arabidopsis tissue culture. Planta (2007) 1.30

LATERAL ORGAN BOUNDARIES DOMAIN transcription factors direct callus formation in Arabidopsis regeneration. Cell Res (2012) 1.27

Auxin-dependent cell cycle reactivation through transcriptional regulation of Arabidopsis E2Fa by lateral organ boundary proteins. Plant Cell (2011) 1.17

Keeping plants in shape: polycomb-group genes and histone methylation. Semin Cell Dev Biol (2008) 1.13

Reprogramming of H3K27me3 is critical for acquisition of pluripotency from cultured Arabidopsis tissues. PLoS Genet (2012) 1.10

De novo shoot organogenesis: from art to science. Trends Plant Sci (2011) 1.08

Distribution of indole-3-acetic acid in Petunia hybrida shoot tip cuttings and relationship between auxin transport, carbohydrate metabolism and adventitious root formation. Planta (2013) 1.08

Pre-procambial cells are niches for pluripotent and totipotent stem-like cells for organogenesis and somatic embryogenesis in the peach palm: a histological study. Plant Cell Rep (2012) 0.95

Distinct modes of adventitious rooting in Arabidopsis thaliana. Plant Biol (Stuttg) (2011) 0.94

Effects of three auxin-inducible LBD members on lateral root formation in Arabidopsis thaliana. Planta (2012) 0.93

The hormonal control of regeneration in plants. Curr Top Dev Biol (2014) 0.92

LBD29 regulates the cell cycle progression in response to auxin during lateral root formation in Arabidopsis thaliana. Ann Bot (2012) 0.88

Initiation of dedifferentiation and structural changes in in vitro cultured petiole of Arabidopsis thaliana. Protoplasma (2010) 0.83

Articles by these authors

Serum microRNA signatures identified in a genome-wide serum microRNA expression profiling predict survival of non-small-cell lung cancer. J Clin Oncol (2010) 5.92

Rapamycin prevents epilepsy in a mouse model of tuberous sclerosis complex. Ann Neurol (2008) 5.55

Ghrelin controls hippocampal spine synapse density and memory performance. Nat Neurosci (2006) 4.25

Rationally designed, polymeric, extended metal-ciprofloxacin complexes. Chemistry (2005) 3.56

Genetic variants of miRNA sequences and non-small cell lung cancer survival. J Clin Invest (2008) 3.53

SERRATE is a novel nuclear regulator in primary microRNA processing in Arabidopsis. Plant J (2006) 2.98

A genome-wide association study identifies two new lung cancer susceptibility loci at 13q12.12 and 22q12.2 in Han Chinese. Nat Genet (2011) 2.85

The rice tapetum degeneration retardation gene is required for tapetum degradation and anther development. Plant Cell (2006) 2.62

Novel as1 and as2 defects in leaf adaxial-abaxial polarity reveal the requirement for ASYMMETRIC LEAVES1 and 2 and ERECTA functions in specifying leaf adaxial identity. Development (2003) 2.17

Decreased regional homogeneity in schizophrenia: a resting state functional magnetic resonance imaging study. Neuroreport (2006) 2.08

Long noncoding RNA: an emerging paradigm of cancer research. Tumour Biol (2013) 2.07

Coupling between NMDA receptor and acid-sensing ion channel contributes to ischemic neuronal death. Neuron (2005) 2.07

A novel class of potent influenza virus inhibitors: polysubstituted acylthiourea and its fused heterocycle derivatives. Bioorg Med Chem Lett (2005) 2.01

Identification of ten serum microRNAs from a genome-wide serum microRNA expression profile as novel noninvasive biomarkers for nonsmall cell lung cancer diagnosis. Int J Cancer (2011) 2.01

Development of genome-wide DNA polymorphism database for map-based cloning of rice genes. Plant Physiol (2004) 1.98

Laparoendoscopic single-site nephrectomy compared with conventional laparoscopic nephrectomy: a systematic review and meta-analysis of comparative studies. Eur Urol (2012) 1.96

Obesity and hypertriglyceridemia produce cognitive impairment. Endocrinology (2008) 1.94

A functional genetic variant in microRNA-196a2 is associated with increased susceptibility of lung cancer in Chinese. Cancer Epidemiol Biomarkers Prev (2009) 1.93

Cytoneme-mediated contact-dependent transport of the Drosophila decapentaplegic signaling protein. Science (2014) 1.92

Impact of apolipoprotein E (ApoE) polymorphism on brain ApoE levels. J Neurosci (2008) 1.92

Characterization of MADS-domain transcription factor complexes in Arabidopsis flower development. Proc Natl Acad Sci U S A (2012) 1.83

Entangled coordination networks with inherent features of polycatenation, polythreading, and polyknotting. Angew Chem Int Ed Engl (2005) 1.81

Osteocalcin regulates murine and human fertility through a pancreas-bone-testis axis. J Clin Invest (2013) 1.81

The Putative RNA-dependent RNA polymerase RDR6 acts synergistically with ASYMMETRIC LEAVES1 and 2 to repress BREVIPEDICELLUS and MicroRNA165/166 in Arabidopsis leaf development. Plant Cell (2005) 1.80

Genome-wide ORFeome cloning and analysis of Arabidopsis transcription factor genes. Plant Physiol (2004) 1.79

AtPID: Arabidopsis thaliana protein interactome database--an integrative platform for plant systems biology. Nucleic Acids Res (2007) 1.76

Average gene length is highly conserved in prokaryotes and eukaryotes and diverges only between the two kingdoms. Mol Biol Evol (2006) 1.67

Hospitalizations for pediatric stone disease in United States, 2002-2007. J Urol (2010) 1.62

In utero onset of long QT syndrome with atrioventricular block and spontaneous or lidocaine-induced ventricular tachycardia: compound effects of hERG pore region mutation and SCN5A N-terminus variant. Heart Rhythm (2008) 1.61

Autoantibody induction by DNA-containing immune complexes requires HMGB1 with the TLR2/microRNA-155 pathway. J Immunol (2013) 1.61

Interstrand DNA cross-links induced by alpha,beta-unsaturated aldehydes derived from lipid peroxidation and environmental sources. Acc Chem Res (2008) 1.60

Transplantation of human neural stem cells exerts neuroprotection in a rat model of Parkinson's disease. J Neurosci (2006) 1.59

The A20 gene protects kidneys from ischaemia/reperfusion injury by suppressing pro-inflammatory activation. J Mol Med (Berl) (2008) 1.58

Transcription factor AtMYB103 is required for anther development by regulating tapetum development, callose dissolution and exine formation in Arabidopsis. Plant J (2007) 1.58

Genome of the Chinese tree shrew. Nat Commun (2013) 1.55

Microtubule-dependent distribution of mRNA in adult cardiocytes. Am J Physiol Heart Circ Physiol (2008) 1.55

Hierarchical MnMoO(4)/CoMoO(4) heterostructured nanowires with enhanced supercapacitor performance. Nat Commun (2011) 1.55

Smoking and mortality in a prospective cohort study of elderly Chinese in Hong Kong. Addiction (2014) 1.52

Role of small-conductance calcium-activated potassium channels in atrial electrophysiology and fibrillation in the dog. Circulation (2013) 1.51

Association analyses identify multiple new lung cancer susceptibility loci and their interactions with smoking in the Chinese population. Nat Genet (2012) 1.49

Neurite outgrowth and in vivo sensory innervation mediated by a Ca(V)2.2-laminin beta 2 stop signal. J Neurosci (2008) 1.49

Common genetic variants on 5p15.33 contribute to risk of lung adenocarcinoma in a Chinese population. Carcinogenesis (2009) 1.48

Ovarian torsion: diagnosis of inclusion mandates earlier intervention. J Pediatr Surg (2012) 1.43

White matter abnormalities in first-episode, treatment-naive young adults with major depressive disorder. Am J Psychiatry (2007) 1.43

An optimized murine model of ferric chloride-induced arterial thrombosis for thrombosis research. Thromb Res (2005) 1.43

FGF14 regulates the intrinsic excitability of cerebellar Purkinje neurons. Neurobiol Dis (2008) 1.43

High-mobility group box 1 activates caspase-1 and promotes hepatocellular carcinoma invasiveness and metastases. Hepatology (2012) 1.42

Optimal delivery of minocycline to the brain: implication for human studies of acute neuroprotection. Exp Neurol (2004) 1.40

Impaired hippocampal synaptic transmission and plasticity in mice lacking fibroblast growth factor 14. Mol Cell Neurosci (2007) 1.40

Prolonged cold ischemia does not trigger lethal rejection or accelerate the acute rejection in two allogeneic rat liver transplantation models. J Surg Res (2011) 1.40

Characterization of acid-sensing ion channels in dorsal horn neurons of rat spinal cord. J Biol Chem (2004) 1.38

An ACTH- and ATP-regulated background K+ channel in adrenocortical cells is TREK-1. J Biol Chem (2002) 1.37

Acute cannabinoids impair working memory through astroglial CB1 receptor modulation of hippocampal LTD. Cell (2012) 1.37

miR-375 inhibits autophagy and reduces viability of hepatocellular carcinoma cells under hypoxic conditions. Gastroenterology (2012) 1.36

Cardiac-specific expression and hypertrophic upregulation of the feline Na(+)-Ca(2+) exchanger gene H1-promoter in a transgenic mouse model. Circ Res (2002) 1.35

Interlocked and interdigitated architectures from self-assembly of long flexible ligands and cadmium salts. Angew Chem Int Ed Engl (2004) 1.35

Benzyl alcohol attenuates acetaminophen-induced acute liver injury in a Toll-like receptor-4-dependent pattern in mice. Hepatology (2014) 1.35

CCAT2 is a lung adenocarcinoma-specific long non-coding RNA and promotes invasion of non-small cell lung cancer. Tumour Biol (2014) 1.34

Impaired spatial learning and defective theta burst induced LTP in mice lacking fibroblast growth factor 14. Neurobiol Dis (2007) 1.34

Long-term effect of stent placement in 115 patients with Budd-Chiari syndrome. World J Gastroenterol (2003) 1.34

Therapeutic targets and limits of minocycline neuroprotection in experimental ischemic stroke. BMC Neurosci (2009) 1.33

Upregulation of the long noncoding RNA TUG1 promotes proliferation and migration of esophageal squamous cell carcinoma. Tumour Biol (2014) 1.32

Enhanced contextual fear memory in central serotonin-deficient mice. Proc Natl Acad Sci U S A (2008) 1.31

The floral organ number4 gene encoding a putative ortholog of Arabidopsis CLAVATA3 regulates apical meristem size in rice. Plant Physiol (2006) 1.31

Ischemic postconditioning protects remodeled myocardium via the PI3K-PKB/Akt reperfusion injury salvage kinase pathway. Cardiovasc Res (2006) 1.31

miR396-targeted AtGRF transcription factors are required for coordination of cell division and differentiation during leaf development in Arabidopsis. J Exp Bot (2010) 1.31

A series of new organic-inorganic molybdenum arsenate complexes based on [(ZnO6)(As3O3)2Mo6O18]4- and [HxAs2Mo6O26](6-x)- clusters as SBUs. Inorg Chem (2007) 1.30

A membrane-bound NAC transcription factor, ANAC017, mediates mitochondrial retrograde signaling in Arabidopsis. Plant Cell (2013) 1.26

The natural history and treatment of epilepsy in a murine model of tuberous sclerosis. Epilepsia (2007) 1.26

Quality of reporting of trial abstracts needs to be improved: using the CONSORT for abstracts to assess the four leading Chinese medical journals of traditional Chinese medicine. Trials (2010) 1.26

Role of HTRA1, a serine protease, in the progression of articular cartilage degeneration. Histol Histopathol (2010) 1.24

DNA repair gene XRCC1 and XPD polymorphisms and risk of lung cancer in a Chinese population. Carcinogenesis (2002) 1.22

c-Raf/MEK/ERK pathway controls protein kinase C-mediated p70S6K activation in adult cardiac muscle cells. J Biol Chem (2002) 1.22

Human bone marrow mesenchymal stem cells differentiate into insulin-producing cells upon microenvironmental manipulation in vitro. Differentiation (2009) 1.22

Genetic interaction between the AS1-AS2 and RDR6-SGS3-AGO7 pathways for leaf morphogenesis. Plant Cell Physiol (2006) 1.21

Cellular-specific role of toll-like receptor 4 in hepatic ischemia-reperfusion injury in mice. Hepatology (2013) 1.21

Lung autotransplantation technique in the treatment for central lung cancer of upper lobe. J Thorac Oncol (2008) 1.21

The ARGONAUTE10 gene modulates shoot apical meristem maintenance and establishment of leaf polarity by repressing miR165/166 in Arabidopsis. Plant J (2008) 1.21

Ribosomal proteins promote leaf adaxial identity. Development (2008) 1.20

Occurrence and transport of tetracycline, sulfonamide, quinolone, and macrolide antibiotics in the Haihe River Basin, China. Environ Sci Technol (2011) 1.20

Phenological responses of Ulmus pumila (Siberian Elm) to climate change in the temperate zone of China. Int J Biometeorol (2011) 1.19

Notch-induced rat and human bone marrow stromal cell grafts reduce ischemic cell loss and ameliorate behavioral deficits in chronic stroke animals. Stem Cells Dev (2009) 1.18

Significant neuroprotection against ischemic brain injury by inhibition of the MEK1 protein kinase in mice: exploration of potential mechanism associated with apoptosis. J Pharmacol Exp Ther (2003) 1.18

In-depth temporal transcriptome profiling reveals a crucial developmental switch with roles for RNA processing and organelle metabolism that are essential for germination in Arabidopsis. Plant Physiol (2011) 1.17

Hydrothermal syntheses, crystal structures and magnetic properties of two copper(II) complexes involved in situ ligand synthesis. Dalton Trans (2007) 1.17

Hypertension after experimental cerebral ischemia: candesartan provides neurovascular protection. J Hypertens (2006) 1.17

Factors characterizing Staphylococcus epidermidis invasiveness determined by comparative genomics. Infect Immun (2005) 1.17

Nucleolar localization of hTERT protein is associated with telomerase function. Exp Cell Res (2002) 1.17

Plant fertility defects induced by the enhanced expression of microRNA167. Cell Res (2006) 1.17

Functional polymorphisms of matrix metalloproteinase-9 are associated with risk of occurrence and metastasis of lung cancer. Clin Cancer Res (2005) 1.16

Electrophysiological properties of human hypothalamic hamartomas. Ann Neurol (2005) 1.16

ASYMMETRIC LEAVES1, an Arabidopsis gene that is involved in the control of cell differentiation in leaves. Planta (2001) 1.15

Upregulation of acid-sensing ion channel ASIC1a in spinal dorsal horn neurons contributes to inflammatory pain hypersensitivity. J Neurosci (2007) 1.15

Functional expression of TLR9 is associated to the metastatic potential of human lung cancer cell: functional active role of TLR9 on tumor metastasis. Cancer Biol Ther (2007) 1.15

Neural progenitor NT2N cell lines from teratocarcinoma for transplantation therapy in stroke. Prog Neurobiol (2008) 1.15

Prognostic value of survivin in patients with non-small cell lung carcinoma: a systematic review with meta-analysis. PLoS One (2012) 1.15

The proteolytic function of the Arabidopsis 26S proteasome is required for specifying leaf adaxial identity. Plant Cell (2006) 1.14