Evolutionary relationship of archaebacteria, eubacteria, and eukaryotes inferred from phylogenetic trees of duplicated genes.

PubWeight™: 8.45‹?› | Rank: Top 0.1%

🔗 View Article (PMC 298494)

Published in Proc Natl Acad Sci U S A on December 01, 1989

Authors

N Iwabe1, K Kuma, M Hasegawa, S Osawa, T Miyata

Author Affiliations

1: Department of Biology, Faculty of Science, Kyushu University, Fukuoka, Japan.

Articles citing this

(truncated to the top 100)

Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya. Proc Natl Acad Sci U S A (1990) 50.63

The winds of (evolutionary) change: breathing new life into microbiology. J Bacteriol (1994) 10.00

Horizontal gene transfer among genomes: the complexity hypothesis. Proc Natl Acad Sci U S A (1999) 7.65

Characterization of uncultivated prokaryotes: isolation and analysis of a 40-kilobase-pair genome fragment from a planktonic marine archaeon. J Bacteriol (1996) 5.95

A psychrophilic crenarchaeon inhabits a marine sponge: Cenarchaeum symbiosum gen. nov., sp. nov. Proc Natl Acad Sci U S A (1996) 4.73

CORUM: the comprehensive resource of mammalian protein complexes--2009. Nucleic Acids Res (2009) 4.71

Algorithms for computing parsimonious evolutionary scenarios for genome evolution, the last universal common ancestor and dominance of horizontal gene transfer in the evolution of prokaryotes. BMC Evol Biol (2003) 4.70

The universal ancestor. Proc Natl Acad Sci U S A (1998) 4.51

Recent evidence for evolution of the genetic code. Microbiol Rev (1992) 4.32

Interpreting the universal phylogenetic tree. Proc Natl Acad Sci U S A (2000) 4.09

Determining divergence times with a protein clock: update and reevaluation. Proc Natl Acad Sci U S A (1997) 4.05

Archaea and the prokaryote-to-eukaryote transition. Microbiol Mol Biol Rev (1997) 3.94

Phylogeny of dissimilatory sulfite reductases supports an early origin of sulfate respiration. J Bacteriol (1998) 3.94

Kingdom protozoa and its 18 phyla. Microbiol Rev (1993) 3.74

Genomic evidence for two functionally distinct gene classes. Proc Natl Acad Sci U S A (1998) 3.72

Phylogeny of the phototrophic rhizobium strain BTAi1 by polymerase chain reaction-based sequencing of a 16S rRNA gene segment. J Bacteriol (1991) 3.66

Transcription in archaea: similarity to that in eucarya. Proc Natl Acad Sci U S A (1995) 3.24

Root of the universal tree of life based on ancient aminoacyl-tRNA synthetase gene duplications. Proc Natl Acad Sci U S A (1995) 3.01

Protein phylogenies and signature sequences: A reappraisal of evolutionary relationships among archaebacteria, eubacteria, and eukaryotes. Microbiol Mol Biol Rev (1998) 2.96

The root of the universal tree and the origin of eukaryotes based on elongation factor phylogeny. Proc Natl Acad Sci U S A (1996) 2.93

16S rRNA genes reveal stratified open ocean bacterioplankton populations related to the Green Non-Sulfur bacteria. Proc Natl Acad Sci U S A (1996) 2.86

Biochemistry and evolution of anaerobic energy metabolism in eukaryotes. Microbiol Mol Biol Rev (2012) 2.65

Imbroglios of viral taxonomy: genetic exchange and failings of phenetic approaches. J Bacteriol (2002) 2.53

Identification of shared single copy nuclear genes in Arabidopsis, Populus, Vitis and Oryza and their phylogenetic utility across various taxonomic levels. BMC Evol Biol (2010) 2.50

The genomic tree as revealed from whole proteome comparisons. Genome Res (1999) 2.47

There must be a prokaryote somewhere: microbiology's search for itself. Microbiol Rev (1994) 2.39

An archaeal origin of eukaryotes supports only two primary domains of life. Nature (2013) 2.31

Phylogeny of genes for secretion NTPases: identification of the widespread tadA subfamily and development of a diagnostic key for gene classification. Proc Natl Acad Sci U S A (2001) 2.28

Comparative analysis of ribosomal proteins in complete genomes: an example of reductive evolution at the domain scale. Nucleic Acids Res (2002) 2.24

The tree of one percent. Genome Biol (2006) 2.23

On the evolution of structure in aminoacyl-tRNA synthetases. Microbiol Mol Biol Rev (2003) 2.22

Ether polar lipids of methanogenic bacteria: structures, comparative aspects, and biosyntheses. Microbiol Rev (1993) 2.18

From complete genomes to measures of substitution rate variability within and between proteins. Genome Res (2000) 2.09

Stein and Moore Award address. Reconstructing history with amino acid sequences. Protein Sci (1992) 2.08

Multiple lateral transfers of dissimilatory sulfite reductase genes between major lineages of sulfate-reducing prokaryotes. J Bacteriol (2001) 2.05

Archaeal DNA replication: identifying the pieces to solve a puzzle. Genetics (1999) 1.97

How big is the iceberg of which organellar genes in nuclear genomes are but the tip? Philos Trans R Soc Lond B Biol Sci (2003) 1.95

Archaea: narrowing the gap between prokaryotes and eukaryotes. Proc Natl Acad Sci U S A (1995) 1.92

Cloning of Giardia lamblia heat shock protein HSP70 homologs: implications regarding origin of eukaryotic cells and of endoplasmic reticulum. Proc Natl Acad Sci U S A (1994) 1.91

Mapping the tree of life: progress and prospects. Microbiol Mol Biol Rev (2009) 1.87

Exchange of genetic markers at extremely high temperatures in the archaeon Sulfolobus acidocaldarius. J Bacteriol (1996) 1.84

Ancestral paralogs and pseudoparalogs and their role in the emergence of the eukaryotic cell. Nucleic Acids Res (2005) 1.77

Transcription factor IID in the Archaea: sequences in the Thermococcus celer genome would encode a product closely related to the TATA-binding protein of eukaryotes. Proc Natl Acad Sci U S A (1994) 1.77

recA-like genes from three archaean species with putative protein products similar to Rad51 and Dmc1 proteins of the yeast Saccharomyces cerevisiae. Nucleic Acids Res (1996) 1.76

Sequence analysis of the AAA protein family. Protein Sci (1997) 1.75

Ribosomal RNA diversity predicts genome diversity in gut bacteria and their relatives. Nucleic Acids Res (2010) 1.69

Phylogenetic analysis of Sec7-domain-containing Arf nucleotide exchangers. Mol Biol Cell (2004) 1.66

Rooting the tree of life by transition analyses. Biol Direct (2006) 1.66

Structure of pyrrolysyl-tRNA synthetase, an archaeal enzyme for genetic code innovation. Proc Natl Acad Sci U S A (2007) 1.65

Paleoproterozoic snowball earth: extreme climatic and geochemical global change and its biological consequences. Proc Natl Acad Sci U S A (2000) 1.61

Evidence for emergence of diverse polioviruses from C-cluster coxsackie A viruses and implications for global poliovirus eradication. Proc Natl Acad Sci U S A (2007) 1.60

Evidence for a chimeric nature of nuclear genomes: eubacterial origin of eukaryotic glyceraldehyde-3-phosphate dehydrogenase genes. Proc Natl Acad Sci U S A (1993) 1.56

The origin and evolution of Archaea: a state of the art. Philos Trans R Soc Lond B Biol Sci (2006) 1.54

Whole-proteome phylogeny of prokaryotes by feature frequency profiles: An alignment-free method with optimal feature resolution. Proc Natl Acad Sci U S A (2009) 1.44

Was the nucleus the first endosymbiont? Proc Natl Acad Sci U S A (1994) 1.41

The last universal common ancestor: emergence, constitution and genetic legacy of an elusive forerunner. Biol Direct (2008) 1.40

The origin of eukaryotes and their relationship with the Archaea: are we at a phylogenomic impasse? Nat Rev Microbiol (2010) 1.40

Phylogeny and beyond: Scientific, historical, and conceptual significance of the first tree of life. Proc Natl Acad Sci U S A (2012) 1.39

Tempo, mode, the progenote, and the universal root. Proc Natl Acad Sci U S A (1994) 1.38

Signal transduction in the archaeon Halobacterium salinarium is processed through three subfamilies of 13 soluble and membrane-bound transducer proteins. Proc Natl Acad Sci U S A (1996) 1.36

Functional interaction of yeast and human TATA-binding proteins with an archaeal RNA polymerase and promoter. Proc Natl Acad Sci U S A (1995) 1.35

Deep phylogeny, ancestral groups and the four ages of life. Philos Trans R Soc Lond B Biol Sci (2010) 1.34

A duplicate gene rooting of seed plants and the phylogenetic position of flowering plants. Philos Trans R Soc Lond B Biol Sci (2010) 1.33

A class of eukaryotic GTPase with a punctate distribution suggesting multiple functional replacements of translation elongation factor 1alpha. Proc Natl Acad Sci U S A (2004) 1.32

Dynamics of Recognition between tRNA and elongation factor Tu. J Mol Biol (2008) 1.32

On the origin of cells and viruses: primordial virus world scenario. Ann N Y Acad Sci (2009) 1.29

The comings and goings of homing endonucleases and mobile introns. Proc Natl Acad Sci U S A (1993) 1.28

Cloning of the HSP70 gene from Halobacterium marismortui: relatedness of archaebacterial HSP70 to its eubacterial homologs and a model for the evolution of the HSP70 gene. J Bacteriol (1992) 1.26

Evolution of translational elongation factor (EF) sequences: reliability of global phylogenies inferred from EF-1 alpha(Tu) and EF-2(G) proteins. Proc Natl Acad Sci U S A (1994) 1.26

Primary endosymbiosis events date to the later Proterozoic with cross-calibrated phylogenetic dating of duplicated ATPase proteins. Proc Natl Acad Sci U S A (2013) 1.25

Whole-genome comparison of leucine-rich repeat extensins in Arabidopsis and rice. A conserved family of cell wall proteins form a vegetative and a reproductive clade. Plant Physiol (2003) 1.24

Evidence that eukaryotic triosephosphate isomerase is of alpha-proteobacterial origin. Proc Natl Acad Sci U S A (1997) 1.22

Cloning and functional analysis of the TATA binding protein from Sulfolobus shibatae. Nucleic Acids Res (1995) 1.22

From volcanic origins of chemoautotrophic life to Bacteria, Archaea and Eukarya. Philos Trans R Soc Lond B Biol Sci (2006) 1.20

Localizing genes on the map of the genome of Haloferax volcanii, one of the Archaea. Proc Natl Acad Sci U S A (1992) 1.20

Calculating the probability of multitaxon evolutionary trees: bootstrappers Gambit. Proc Natl Acad Sci U S A (1995) 1.20

Phylogenetic analysis of sequences from diverse bacteria with homology to the Escherichia coli rho gene. J Bacteriol (1994) 1.16

Default taxonomy: Ernst Mayr's view of the microbial world. Proc Natl Acad Sci U S A (1998) 1.16

Evidence for an early prokaryotic origin of histones H2A and H4 prior to the emergence of eukaryotes. Nucleic Acids Res (1998) 1.14

Fibrillarin-like proteins occur in the domain Archaea. J Bacteriol (1994) 1.14

An archaebacterial homologue of the essential eubacterial cell division protein FtsZ. Proc Natl Acad Sci U S A (1996) 1.14

Distribution and phylogenies of enzymes of the Embden-Meyerhof-Parnas pathway from archaea and hyperthermophilic bacteria support a gluconeogenic origin of metabolism. Archaea (2003) 1.13

On the nature of global classification. Proc Natl Acad Sci U S A (1992) 1.13

The unseen world: reflections on Leeuwenhoek (1677) 'Concerning little animals'. Philos Trans R Soc Lond B Biol Sci (2015) 1.12

A physical map of the sulfur-dependent archaebacterium Sulfolobus acidocaldarius 7 chromosome. J Bacteriol (1993) 1.11

Eukaryotic origins: How and when was the mitochondrion acquired? Cold Spring Harb Perspect Biol (2014) 1.11

When outgroups fail; phylogenomics of rooting the emerging pathogen, Coxiella burnetii. Syst Biol (2013) 1.11

The origin of eukaryotes is suggested as the symbiosis of pyrococcus into gamma-proteobacteria by phylogenetic tree based on gene content. J Mol Evol (2004) 1.10

Turning the crown upside down: gene tree parsimony roots the eukaryotic tree of life. Syst Biol (2012) 1.09

Archaea--timeline of the third domain. Nat Rev Microbiol (2010) 1.09

Evidence for the early divergence of tryptophanyl- and tyrosyl-tRNA synthetases. J Mol Evol (1997) 1.08

Genome beginnings: rooting the tree of life. Philos Trans R Soc Lond B Biol Sci (2009) 1.08

Translation elongation factor Tu cleaved by a phage-exclusion system. Proc Natl Acad Sci U S A (1994) 1.07

Ancient gene duplications and the root(s) of the tree of life. Protoplasma (2005) 1.07

On the evolution of the tRNA-dependent amidotransferases, GatCAB and GatDE. J Mol Biol (2008) 1.05

Reconstructing ancestral gene content by coevolution. Genome Res (2009) 1.04

Global phylogenomic analysis disentangles the complex evolutionary history of DNA replication in archaea. Genome Biol Evol (2014) 1.03

3-hydroxy-3-methylglutaryl coenzyme A reductase of Sulfolobus solfataricus: DNA sequence, phylogeny, expression in Escherichia coli of the hmgA gene, and purification and kinetic characterization of the gene product. J Bacteriol (1997) 1.03

Concerted gene recruitment in early plant evolution. Genome Biol (2008) 1.02

Genome networks root the tree of life between prokaryotic domains. Genome Biol Evol (2010) 1.02

Articles cited by this

The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol (1987) 266.90

Bacterial evolution. Microbiol Rev (1987) 85.63

Phylogenetic structure of the prokaryotic domain: the primary kingdoms. Proc Natl Acad Sci U S A (1977) 26.08

Evolutionary change in 5S RNA secondary structure and a phylogenic tree of 54 5S RNA species. Proc Natl Acad Sci U S A (1979) 8.19

DNA sequences from the str operon of Escherichia coli. J Biol Chem (1980) 6.25

Archaebacterial DNA-dependent RNA polymerases testify to the evolution of the eukaryotic nuclear genome. Proc Natl Acad Sci U S A (1989) 5.54

Archaebacterial phylogeny: perspectives on the urkingdoms. Syst Appl Microbiol (1986) 4.10

Ribosomal proteins in halobacteria. Can J Microbiol (1989) 3.36

Eocytes: a new ribosome structure indicates a kingdom with a close relationship to eukaryotes. Proc Natl Acad Sci U S A (1984) 3.11

Origin and evolution of organisms as deduced from 5S ribosomal RNA sequences. Mol Biol Evol (1987) 2.81

Sequence of the initiation factor IF2 gene: unusual protein features and homologies with elongation factors. Proc Natl Acad Sci U S A (1984) 2.72

Origin of the eukaryotic nucleus determined by rate-invariant analysis of rRNA sequences. Nature (1988) 2.50

The nucleotide sequence of the Escherichia coli fus gene, coding for elongation factor G. Nucleic Acids Res (1984) 2.27

Organization and sequence of the genes coding for the proton-translocating ATPase of Bacillus megaterium. J Biol Chem (1989) 2.22

Organization and codon usage of the streptomycin operon in Micrococcus luteus, a bacterium with a high genomic G + C content. J Bacteriol (1987) 1.99

Characterization of the lep operon of Escherichia coli. Identification of the promoter and the gene upstream of the signal peptidase I gene. J Biol Chem (1985) 1.96

The origin of eukaryotic and archaebacterial cells. Ann N Y Acad Sci (1987) 1.78

Relatedness of archaebacterial RNA polymerase core subunits to their eubacterial and eukaryotic equivalents. Nucleic Acids Res (1988) 1.77

A conserved gene encoding the 57-kDa subunit of the yeast vacuolar H+-ATPase. J Biol Chem (1989) 1.60

The membrane-associated ATPase from Sulfolobus acidocaldarius is distantly related to F1-ATPase as assessed from the primary structure of its alpha-subunit. J Biol Chem (1988) 1.52

Structure of the yeast valyl-tRNA synthetase gene (VASI) and the homology of its translated amino acid sequence with Escherichia coli isoleucyl-tRNA synthetase. J Biol Chem (1987) 1.46

Nucleotide sequence of the malate dehydrogenase gene of Thermus flavus and its mutation directing an increase in enzyme activity. J Biol Chem (1986) 1.42

Phylogenetic analysis based on rRNA sequences supports the archaebacterial rather than the eocyte tree. Nature (1989) 1.37

Molecular cloning of the beta-subunit of a possible non-F0F1 type ATP synthase from the acidothermophilic archaebacterium, Sulfolobus acidocaldarius. J Biol Chem (1988) 1.32

Sequence homologies in the N-terminal region of the ribosomal 'A' proteins from Methanobacterium Thermoautotrophicum and Halobacterium cutirubrum. Biochim Biophys Acta (1980) 1.26

Primary structure of glyceraldehyde-3-phosphate dehydrogenase deduced from the nucleotide sequence of the thermophilic archaebacterium Methanothermus fervidus. Gene (1988) 1.23

Evolution of interferon genes. Interferon (1985) 1.09

Gene for the diphtheria toxin-susceptible elongation factor 2 from Methanococcus vannielii. Nucleic Acids Res (1988) 1.05

Articles by these authors

Dating of the human-ape splitting by a molecular clock of mitochondrial DNA. J Mol Evol (1985) 47.78

Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in hominoidea. J Mol Evol (1989) 16.24

Intensive insulin therapy prevents the progression of diabetic microvascular complications in Japanese patients with non-insulin-dependent diabetes mellitus: a randomized prospective 6-year study. Diabetes Res Clin Pract (1995) 12.51

CONSEL: for assessing the confidence of phylogenetic tree selection. Bioinformatics (2001) 11.90

Regulated expression of a gene encoding a nuclear factor, IRF-1, that specifically binds to IFN-beta gene regulatory elements. Cell (1988) 9.04

alpha-Synuclein in filamentous inclusions of Lewy bodies from Parkinson's disease and dementia with lewy bodies. Proc Natl Acad Sci U S A (1998) 8.41

Evolutionary change in 5S RNA secondary structure and a phylogenic tree of 54 5S RNA species. Proc Natl Acad Sci U S A (1979) 8.19

Sequence homology between retroviral reverse transcriptase and putative polymerases of hepatitis B virus and cauliflower mosaic virus. Nature (1983) 6.96

Total enteroscopy with a nonsurgical steerable double-balloon method. Gastrointest Endosc (2001) 6.76

Structurally similar but functionally distinct factors, IRF-1 and IRF-2, bind to the same regulatory elements of IFN and IFN-inducible genes. Cell (1989) 6.11

Mass screening for lung cancer with mobile spiral computed tomography scanner. Lancet (1998) 6.09

UGA is read as tryptophan in Mycoplasma capricolum. Proc Natl Acad Sci U S A (1985) 5.98

The guanine and cytosine content of genomic DNA and bacterial evolution. Proc Natl Acad Sci U S A (1987) 5.76

CGG: an unassigned or nonsense codon in Mycoplasma capricolum. Proc Natl Acad Sci U S A (1991) 5.16

Interleukin-2 receptor beta chain gene: generation of three receptor forms by cloned human alpha and beta chain cDNA's. Science (1989) 5.08

Nucleotide sequence divergence and functional constraint in mRNA evolution. Proc Natl Acad Sci U S A (1980) 4.71

Structural homology of Torpedo californica acetylcholine receptor subunits. Nature (1983) 4.70

Unassigned or nonsense codons in Micrococcus luteus. J Mol Biol (1993) 4.50

A giant nucleopore protein that binds Ran/TC4. Nature (1995) 4.36

Two types of amino acid substitutions in protein evolution. J Mol Evol (1979) 4.34

Assembly of microtubule-associated protein tau into Alzheimer-like filaments induced by sulphated glycosaminoglycans. Nature (1996) 4.12

Deficiency of the GPI anchor caused by a somatic mutation of the PIG-A gene in paroxysmal nocturnal hemoglobinuria. Cell (1993) 4.04

Gene transfer to the nucleus and the evolution of chloroplasts. Nature (1998) 3.79

Nucleotide sequence of the rrnB 16S ribosomal RNA gene from Mycoplasma capricolum. Mol Gen Genet (1984) 3.77

Primary structure of alpha-subunit precursor of Torpedo californica acetylcholine receptor deduced from cDNA sequence. Nature (1982) 3.69

Male-driven molecular evolution: a model and nucleotide sequence analysis. Cold Spring Harb Symp Quant Biol (1987) 3.66

Molecular evolution of mRNA: a method for estimating evolutionary rates of synonymous and amino acid substitutions from homologous nucleotide sequences and its application. J Mol Evol (1980) 3.61

Model of amino acid substitution in proteins encoded by mitochondrial DNA. J Mol Evol (1996) 3.53

Nucleotide sequence of human endogenous retrovirus genome related to the mouse mammary tumor virus genome. J Virol (1986) 3.52

IFNβ-1b may severely exacerbate Japanese optic-spinal MS in neuromyelitis optica spectrum. Neurology (2010) 3.34

Codon recognition patterns as deduced from sequences of the complete set of transfer RNA species in Mycoplasma capricolum. Resemblance to mitochondria. J Mol Biol (1989) 3.17

Commitment and differentiation of osteoclast precursor cells by the sequential expression of c-Fms and receptor activator of nuclear factor kappaB (RANK) receptors. J Exp Med (1999) 3.07

Ribosomal RNA trees misleading? Nature (1993) 3.04

Models of amino acid substitution and applications to mitochondrial protein evolution. Mol Biol Evol (1998) 3.03

Close structural resemblance between putative polymerase of a Drosophila transposable genetic element 17.6 and pol gene product of Moloney murine leukaemia virus. EMBO J (1985) 3.02

Isolation and characterization of the active cDNA of the human cell cycle gene (RCC1) involved in the regulation of onset of chromosome condensation. Genes Dev (1987) 2.86

Response of anti-NMDA receptor encephalitis without tumor to immunotherapy including rituximab. Neurology (2008) 2.85

Repetitive sequences in class-switch recombination regions of immunoglobulin heavy chain genes. Cell (1981) 2.84

Phylogenetic analysis of the coryneform bacteria by 5S rRNA sequences. J Bacteriol (1987) 2.83

The reeler gene-associated antigen on Cajal-Retzius neurons is a crucial molecule for laminar organization of cortical neurons. Neuron (1995) 2.82

Origin and evolution of organisms as deduced from 5S ribosomal RNA sequences. Mol Biol Evol (1987) 2.81

Mouse-Musashi-1, a neural RNA-binding protein highly enriched in the mammalian CNS stem cell. Dev Biol (1996) 2.68

Nucleotide sequence divergence of mouse immunoglobulin gamma 1 and gamma 2b chain genes and the hypothesis of intervening sequence-mediated domain transfer. Proc Natl Acad Sci U S A (1980) 2.68

Successful en-bloc resection of large superficial tumors in the stomach and colon using sodium hyaluronate and small-caliber-tip transparent hood. Endoscopy (2003) 2.67

A role for Cajal-Retzius cells and reelin in the development of hippocampal connections. Nature (1997) 2.61

Molecular clock of silent substitution: at least six-fold preponderance of silent changes in mitochondrial genes over those in nuclear genes. J Mol Evol (1982) 2.58

The complete nucleotide sequence of the human immunoglobulin heavy chain variable region locus. J Exp Med (1998) 2.56

Primary structures of beta- and delta-subunit precursors of Torpedo californica acetylcholine receptor deduced from cDNA sequences. Nature (1983) 2.55

Towards resolving the interordinal relationships of placental mammals. Syst Biol (1999) 2.53

Nestin-EGFP transgenic mice: visualization of the self-renewal and multipotency of CNS stem cells. Mol Cell Neurosci (2001) 2.47

Results of three-year mass screening programme for lung cancer using mobile low-dose spiral computed tomography scanner. Br J Cancer (2001) 2.46

Plastid genome phylogeny and a model of amino acid substitution for proteins encoded by chloroplast DNA. J Mol Evol (2000) 2.45

Essential role of the small GTPase Rac in disease resistance of rice. Proc Natl Acad Sci U S A (2001) 2.45

Cloning and sequence analysis of cDNA for the luminescent protein aequorin. Proc Natl Acad Sci U S A (1985) 2.42

Protein-bound acrolein: potential markers for oxidative stress. Proc Natl Acad Sci U S A (1998) 2.42

Extraordinarily high evolutionary rate of pseudogenes: evidence for the presence of selective pressure against changes between synonymous codons. Proc Natl Acad Sci U S A (1981) 2.42

Expression cloning of a novel Gal beta (1-3/1-4) GlcNAc alpha 2,3-sialyltransferase using lectin resistance selection. J Biol Chem (1993) 2.40

Distribution of ribonucleic acid coliphages in animals. Appl Environ Microbiol (1981) 2.39

Evolution of RNA polymerases and branching patterns of the three major groups of Archaebacteria. J Mol Evol (1991) 2.38

The nucleotide sequences of rearranged and germline immunoglobulin VH genes of a mouse myeloma MC101 and evolution of VH genes in mouse. J Biol Chem (1982) 2.37

Musashi1: an evolutionally conserved marker for CNS progenitor cells including neural stem cells. Dev Neurosci (2000) 2.36

A metalloproteinase inhibitor domain in Alzheimer amyloid protein precursor. Nature (1993) 2.33

The correlation between papillary thyroid carcinoma and lymphocytic infiltration in the thyroid gland. J Clin Endocrinol Metab (1995) 2.32

The complete nucleotide sequence of mouse immunoglobin gamma 2a gene and evolution of heavy chain genes: further evidence for intervening sequence-mediated domain transfer. Nucleic Acids Res (1981) 2.26

On the maximum likelihood method in molecular phylogenetics. J Mol Evol (1991) 2.26

Nucleotide sequence of the staphylocoagulase gene: its unique COOH-terminal 8 tandem repeats. J Biochem (1987) 2.21

Unusual evolutionary conservation and frequent DNA segment exchange in class I genes of the major histocompatibility complex. Proc Natl Acad Sci U S A (1983) 2.21

Nucleotide sequence of the Syrian hamster intracisternal A-particle gene: close evolutionary relationship of type A particle gene to types B and D oncovirus genes. J Virol (1985) 2.20

Reelin is a secreted glycoprotein recognized by the CR-50 monoclonal antibody. J Neurosci (1997) 2.17

Nucleotide sequence of the structural gene for colicin E1 and predicted structure of the protein. Proc Natl Acad Sci U S A (1982) 2.15

Structural organization of the human kininogen gene and a model for its evolution. J Biol Chem (1985) 2.14

Retroposon analysis of major cetacean lineages: the monophyly of toothed whales and the paraphyly of river dolphins. Proc Natl Acad Sci U S A (2001) 2.11

Proline-directed and non-proline-directed phosphorylation of PHF-tau. J Biol Chem (1995) 2.09

Tachyplesin, a class of antimicrobial peptide from the hemocytes of the horseshoe crab (Tachypleus tridentatus). Isolation and chemical structure. J Biol Chem (1988) 2.09

The number of ribosomal RNA genes in Mycoplasma capricolum. Mol Gen Genet (1981) 2.08

Detection of beta-lactamase production by gram-negative bacteria. J Antibiot (Tokyo) (1976) 2.06

Transplantation of in vitro-expanded fetal neural progenitor cells results in neurogenesis and functional recovery after spinal cord contusion injury in adult rats. J Neurosci Res (2002) 2.06

The ribosomal protein gene cluster of Mycoplasma capricolum. Mol Gen Genet (1987) 2.06

The nucleotide sequence of 5S rRNA from a cellular slime mold Dictyostelium discoideum. Nucleic Acids Res (1980) 2.04

Homocysteine-respondent genes in vascular endothelial cells identified by differential display analysis. GRP78/BiP and novel genes. J Biol Chem (1996) 2.01

The organization and evolution of transfer RNA genes in Mycoplasma capricolum. Nucleic Acids Res (1990) 2.01

Novel models for RNA splicing that involve a small nuclear RNA. Proc Natl Acad Sci U S A (1981) 2.00

Organization and codon usage of the streptomycin operon in Micrococcus luteus, a bacterium with a high genomic G + C content. J Bacteriol (1987) 1.99

Herp, a new ubiquitin-like membrane protein induced by endoplasmic reticulum stress. J Biol Chem (2000) 1.98

Evolution of green plants as deduced from 5S rRNA sequences. Proc Natl Acad Sci U S A (1985) 1.96

Soy isoflavone aglycones are absorbed faster and in higher amounts than their glucosides in humans. J Nutr (2000) 1.95

Non-universal decoding of the leucine codon CUG in several Candida species. Nucleic Acids Res (1993) 1.94

Purification and characterization of 30S ribosomal proteins from Bacillus subtilis: correlation to Escherichia coli 30S proteins. Mol Gen Genet (1982) 1.94

Rapidly evolving mouse alpha-globin-related pseudo gene and its evolutionary history. Proc Natl Acad Sci U S A (1981) 1.92

Dissection of signaling cascades through gp130 in vivo: reciprocal roles for STAT3- and SHP2-mediated signals in immune responses. Immunity (2000) 1.92

A cytoplasmic RNA vector derived from nontransmissible Sendai virus with efficient gene transfer and expression. J Virol (2000) 1.92

Nucleotide sequences of gene segments encoding membrane domains of immunoglobulin gamma chains. Proc Natl Acad Sci U S A (1982) 1.91

Identification of ERSE-II, a new cis-acting element responsible for the ATF6-dependent mammalian unfolded protein response. J Biol Chem (2000) 1.89