Analyses of spatial distributions of sulfate-reducing bacteria and their activity in aerobic wastewater biofilms.

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Published in Appl Environ Microbiol on November 01, 1999

Authors

S Okabe1, T Itoh, H Satoh, Y Watanabe

Author Affiliations

1: Department of Urban and Environmental Engineering, Graduate School of Engineering, Hokkaido University, Kita-ku, Sapporo 060-0813, Japan. sokabe@eng.hokudai.ac.jp

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Deaths from heat-stroke in Japan: 1968-1994. Int J Biometeorol (1999) 1.74

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