PubRank

Nikolaus Rajewsky

Author PubWeight™ 278.83‹?›

Top papers

Rank Title Journal Year PubWeight™‹?›
1 Combinatorial microRNA target predictions. Nat Genet 2005 50.48
2 Silencing of microRNAs in vivo with 'antagomirs'. Nature 2005 32.56
3 Widespread changes in protein synthesis induced by microRNAs. Nature 2008 31.44
4 A pancreatic islet-specific microRNA regulates insulin secretion. Nature 2004 15.02
5 Regulation of the germinal center response by microRNA-155. Science 2007 12.25
6 Discovering microRNAs from deep sequencing data using miRDeep. Nat Biotechnol 2008 10.17
7 A genome-wide map of conserved microRNA targets in C. elegans. Curr Biol 2006 10.14
8 Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project. Science 2010 9.78
9 MiR-150 controls B cell differentiation by targeting the transcription factor c-Myb. Cell 2007 9.33
10 Circular RNAs are a large class of animal RNAs with regulatory potency. Nature 2013 8.54
11 The evolution of gene regulation by transcription factors and microRNAs. Nat Rev Genet 2007 7.92
12 Cell-type-specific signatures of microRNAs on target mRNA expression. Proc Natl Acad Sci U S A 2006 7.11
13 microRNA target predictions across seven Drosophila species and comparison to mammalian targets. PLoS Comput Biol 2005 6.77
14 A human snoRNA with microRNA-like functions. Mol Cell 2008 5.84
15 miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades. Nucleic Acids Res 2011 5.83
16 Dicer ablation affects antibody diversity and cell survival in the B lymphocyte lineage. Cell 2008 5.53
17 MicroRNA profiling of the murine hematopoietic system. Genome Biol 2005 4.94
18 Natural selection on human microRNA binding sites inferred from SNP data. Nat Genet 2006 4.34
19 Survival of resting mature B lymphocytes depends on BCR signaling via the Igalpha/beta heterodimer. Cell 2004 4.31
20 Transcriptome-wide analysis of regulatory interactions of the RNA-binding protein HuR. Mol Cell 2011 4.15
21 Decay rates of human mRNAs: correlation with functional characteristics and sequence attributes. Genome Res 2003 4.07
22 Transcriptional control in the segmentation gene network of Drosophila. PLoS Biol 2004 3.47
23 The landscape of C. elegans 3'UTRs. Science 2010 3.32
24 The microRNA miR-182 is induced by IL-2 and promotes clonal expansion of activated helper T lymphocytes. Nat Immunol 2010 2.53
25 Identification of small ORFs in vertebrates using ribosome footprinting and evolutionary conservation. EMBO J 2014 2.47
26 Conservation of regulatory elements between two species of Drosophila. BMC Bioinformatics 2003 2.06
27 doRiNA: a database of RNA interactions in post-transcriptional regulation. Nucleic Acids Res 2011 2.04
28 Large-scale sorting of C. elegans embryos reveals the dynamics of small RNA expression. Nat Methods 2009 1.82
29 The impact of miRNA target sites in coding sequences and in 3'UTRs. PLoS One 2011 1.82
30 Probabilistic clustering of sequences: inferring new bacterial regulons by comparative genomics. Proc Natl Acad Sci U S A 2002 1.78
31 A cis element in the recombination activating gene locus regulates gene expression by counteracting a distant silencer. Nat Immunol 2004 1.73
32 De novo assembly and validation of planaria transcriptome by massive parallel sequencing and shotgun proteomics. Genome Res 2011 1.70
33 High-resolution profiling and discovery of planarian small RNAs. Proc Natl Acad Sci U S A 2009 1.53
34 In vivo and transcriptome-wide identification of RNA binding protein target sites. Mol Cell 2011 1.47
35 Gene expression of pluripotency determinants is conserved between mammalian and planarian stem cells. EMBO J 2012 1.31
36 Deciphering the porcine intestinal microRNA transcriptome. BMC Genomics 2010 1.30
37 Correlating gene expression variation with cis-regulatory polymorphism in Saccharomyces cerevisiae. Genome Biol Evol 2010 1.06
38 SMASHing regulatory sites in DNA by human-mouse sequence comparisons. Proc IEEE Comput Soc Bioinform Conf 2003 1.01
39 RNA-binding protein RBM20 represses splicing to orchestrate cardiac pre-mRNA processing. J Clin Invest 2014 0.99
40 miR-148a is upregulated by Twist1 and T-bet and promotes Th1-cell survival by regulating the proapoptotic gene Bim. Eur J Immunol 2015 0.98
41 L(ou)sy miRNA targets? Nat Struct Mol Biol 2006 0.98
42 Select microRNAs are essential for early development in the sea urchin. Dev Biol 2011 0.95
43 The SNF2-like helicase HELLS mediates E2F3-dependent transcription and cellular transformation. EMBO J 2011 0.95
44 Identification of LIN28B-bound mRNAs reveals features of target recognition and regulation. RNA Biol 2013 0.88
45 Reexamining microRNA site accessibility in Drosophila: a population genomics study. PLoS One 2009 0.86
46 MiR-150 Controls B Cell Differentiation by Targeting the Transcription Factor c-Myb. Cell 2016 0.75