Published in Biochemistry on August 10, 2004
Crystal structure of an oxygen-binding heme domain related to soluble guanylate cyclases. Proc Natl Acad Sci U S A (2004) 2.41
NO and CO differentially activate soluble guanylyl cyclase via a heme pivot-bend mechanism. EMBO J (2007) 2.08
Probing the function of heme distortion in the H-NOX family. ACS Chem Biol (2008) 1.42
Nitric oxide modulates bacterial biofilm formation through a multicomponent cyclic-di-GMP signaling network. Mol Cell (2012) 1.25
Tonic and acute nitric oxide signaling through soluble guanylate cyclase is mediated by nonheme nitric oxide, ATP, and GTP. Proc Natl Acad Sci U S A (2005) 1.24
Differential sensing of protein influences by NO and CO vibrations in heme adducts. J Am Chem Soc (2006) 1.23
A structural basis for H-NOX signaling in Shewanella oneidensis by trapping a histidine kinase inhibitory conformation. Proc Natl Acad Sci U S A (2009) 1.22
Characterization of functional heme domains from soluble guanylate cyclase. Biochemistry (2005) 1.21
Shewanella oneidensis MR-1 H-NOX regulation of a histidine kinase by nitric oxide. Biochemistry (2007) 1.18
H-NOX regulation of c-di-GMP metabolism and biofilm formation in Legionella pneumophila. Mol Microbiol (2010) 1.13
CO, NO and O2 as Vibrational Probes of Heme Protein Interactions. Coord Chem Rev (2012) 1.09
H-NOX-mediated nitric oxide sensing modulates symbiotic colonization by Vibrio fischeri. Proc Natl Acad Sci U S A (2010) 1.06
Oriented single-crystal nuclear resonance vibrational spectroscopy of [Fe(TPP)(MI)(NO)]: quantitative assessment of the trans effect of NO. Inorg Chem (2010) 1.01
Dynamic ligand exchange in soluble guanylyl cyclase (sGC): implications for sGC regulation and desensitization. J Biol Chem (2011) 1.01
DFT analysis of axial and equatorial effects on heme-CO vibrational modes: applications to CooA and H-NOX heme sensor proteins. Biochemistry (2008) 1.00
Assignment of the ferriheme resonances of high- and low-spin forms of the symmetrical hemin-reconstituted nitrophorins 1-4 by 1H and 13C NMR spectroscopy: the dynamics of heme ruffling deformations. J Biol Inorg Chem (2008) 1.00
Mapping NO movements in crystalline [Fe(Porph)(NO)(1-MeIm)]. J Am Chem Soc (2009) 0.98
Out of thin air: sensory detection of oxygen and carbon dioxide. Neuron (2011) 0.98
CO rebinding to protoheme: investigations of the proximal and distal contributions to the geminate rebinding barrier. J Am Chem Soc (2005) 0.96
Tunnels modulate ligand flux in a heme nitric oxide/oxygen binding (H-NOX) domain. Proc Natl Acad Sci U S A (2011) 0.95
Fluorescent fusion proteins of soluble guanylyl cyclase indicate proximity of the heme nitric oxide domain and catalytic domain. PLoS One (2010) 0.95
Resonance Raman spectra of an O2-binding H-NOX domain reveal heme relaxation upon mutation. Biochemistry (2009) 0.95
Nuclear resonance vibrational spectroscopy applied to [Fe(OEP)(NO)]: the vibrational assignments of five-coordinate ferrous heme-nitrosyls and implications for electronic structure. Inorg Chem (2010) 0.95
Multiple lineage specific expansions within the guanylyl cyclase gene family. BMC Evol Biol (2006) 0.94
The transcription regulator RcoM-2 from Burkholderia xenovorans is a cysteine-ligated hemoprotein that undergoes a redox-mediated ligand switch. Biochemistry (2008) 0.93
Determinants of ligand affinity and heme reactivity in H-NOX domains. Angew Chem Int Ed Engl (2010) 0.92
Structural insights into the role of iron-histidine bond cleavage in nitric oxide-induced activation of H-NOX gas sensor proteins. Proc Natl Acad Sci U S A (2014) 0.89
How do heme-protein sensors exclude oxygen? Lessons learned from cytochrome c', Nostoc puntiforme heme nitric oxide/oxygen-binding domain, and soluble guanylyl cyclase. Antioxid Redox Signal (2012) 0.89
Modulation of NO binding to cytochrome c' by distal and proximal haem pocket residues. J Biol Inorg Chem (2008) 0.89
Structural insights into the molecular mechanism of H-NOX activation. Protein Sci (2010) 0.88
Incorporation of tyrosine and glutamine residues into the soluble guanylate cyclase heme distal pocket alters NO and O2 binding. J Biol Chem (2010) 0.87
Environmental heme-based sensor proteins: implications for understanding bacterial pathogenesis. Antioxid Redox Signal (2012) 0.87
Nitric oxide-sensing H-NOX proteins govern bacterial communal behavior. Trends Biochem Sci (2013) 0.86
Ambidentate H-bonding by heme-bound NO: structural and spectral effects of -O versus -N H-bonding. J Biol Inorg Chem (2008) 0.86
Identification of a haem domain in human soluble adenylate cyclase. Biosci Rep (2012) 0.83
Probing domain interactions in soluble guanylate cyclase. Biochemistry (2011) 0.82
The selectivity of Vibrio cholerae H-NOX for gaseous ligands follows the "sliding scale rule" hypothesis. Ligand interactions with both ferrous and ferric Vc H-NOX. Biochemistry (2013) 0.81
A twist on heme signaling. ACS Chem Biol (2008) 0.80
Identification of Cys94 as the distal ligand to the Fe(III) heme in the transcriptional regulator RcoM-2 from Burkholderia xenovorans. J Biol Inorg Chem (2012) 0.80
Determinants of the heme-CO vibrational modes in the H-NOX family. Biochemistry (2011) 0.80
Quaternary structure controls ligand dynamics in soluble guanylate cyclase. J Biol Chem (2012) 0.79
Soluble Guanylyl Cyclases in Invertebrates: Targets for NO and O(2). Adv Exp Biol (2007) 0.79
Nitric Oxide Mediates Biofilm Formation and Symbiosis in Silicibacter sp. Strain TrichCH4B. MBio (2015) 0.79
Controlling conformational flexibility of an O₂-binding H-NOX domain. Biochemistry (2011) 0.78
Probing the local electronic and geometric properties of the heme iron center in a H-NOX domain. J Inorg Biochem (2011) 0.78
Porphyrin π-stacking in a heme protein scaffold tunes gas ligand affinity. J Inorg Biochem (2013) 0.76
Is histidine dissociation a critical component of the NO/H-NOX signaling mechanism? Insights from X-ray absorption spectroscopy. Dalton Trans (2012) 0.75
Binding of O2 and NO to heme in heme-nitric oxide/oxygen-binding (H-NOX) proteins. A theoretical study. J Phys Chem B (2013) 0.75
Nitric Oxide Regulation of H-NOX Signaling Pathways in Bacteria. Biochemistry (2016) 0.75
Profile of Michael A. Marletta. Proc Natl Acad Sci U S A (2010) 0.75
Factors that distort the heme structure in Heme-Nitric Oxide/OXygen-Binding (H-NOX) protein domains. A theoretical study. J Inorg Biochem (2012) 0.75
Gaseous ligand selectivity of the H-NOX sensor protein from Shewanella oneidensis and comparison to those of other bacterial H-NOXs and soluble guanylyl cyclase. Biochimie (2017) 0.75
What Can Be Learned from Nuclear Resonance Vibrational Spectroscopy: Vibrational Dynamics and Hemes. Chem Rev (2017) 0.75
GAS SENSING AND SIGNALING IN THE PAS-HEME DOMAIN OF THE PSEUDOMONAS AERUGINOSA AER2 RECEPTOR. J Bacteriol (2017) 0.75
Regulation of nitric oxide signaling by formation of a distal receptor-ligand complex. Nat Chem Biol (2017) 0.75
Oxygen sensation and social feeding mediated by a C. elegans guanylate cyclase homologue. Nature (2004) 5.09
Crystal structures of the kinase domain of c-Abl in complex with the small molecule inhibitors PD173955 and imatinib (STI-571). Cancer Res (2002) 4.19
Simultaneous femtosecond X-ray spectroscopy and diffraction of photosystem II at room temperature. Science (2013) 3.60
A distributed chemosensory circuit for oxygen preference in C. elegans. PLoS Biol (2006) 2.95
Femtosecond stimulated Raman spectroscopy. Annu Rev Phys Chem (2007) 2.87
Cellobiose dehydrogenase and a copper-dependent polysaccharide monooxygenase potentiate cellulose degradation by Neurospora crassa. ACS Chem Biol (2011) 2.76
Microfabricated bioprocessor for integrated nanoliter-scale Sanger DNA sequencing. Proc Natl Acad Sci U S A (2006) 2.73
Thioredoxin catalyzes the S-nitrosation of the caspase-3 active site cysteine. Nat Chem Biol (2005) 2.60
Structural basis for substrate targeting and catalysis by fungal polysaccharide monooxygenases. Structure (2012) 2.51
Oxidative cleavage of cellulose by fungal copper-dependent polysaccharide monooxygenases. J Am Chem Soc (2011) 2.45
Room temperature femtosecond X-ray diffraction of photosystem II microcrystals. Proc Natl Acad Sci U S A (2012) 2.43
Crystal structure of an oxygen-binding heme domain related to soluble guanylate cyclases. Proc Natl Acad Sci U S A (2004) 2.41
A molecular basis for NO selectivity in soluble guanylate cyclase. Nat Chem Biol (2005) 2.34
Nanoflow electrospinning serial femtosecond crystallography. Acta Crystallogr D Biol Crystallogr (2012) 2.32
High yield bacterial expression of active c-Abl and c-Src tyrosine kinases. Protein Sci (2005) 2.32
Systems analysis of plant cell wall degradation by the model filamentous fungus Neurospora crassa. Proc Natl Acad Sci U S A (2009) 2.17
Neurons detect increases and decreases in oxygen levels using distinct guanylate cyclases. Neuron (2009) 2.14
Femtosecond Time-Resolved Stimulated Raman Spectroscopy: Application to the Ultrafast Internal Conversion in beta-Carotene. J Phys Chem A (2003) 2.13
Assembly of the covalent linkage between lipoic acid and its cognate enzymes. Chem Biol (2003) 2.11
Structural observation of the primary isomerization in vision with femtosecond-stimulated Raman. Science (2005) 2.02
Femtosecond Time-Resolved Stimulated Raman Spectroscopy of the S(2) (1B(u)) Excited State of beta-Carotene. J Phys Chem A (2004) 1.90
Development and multiplexed control of latching pneumatic valves using microfluidic logical structures. Lab Chip (2006) 1.89
N-terminal processing of proteins exported by malaria parasites. Mol Biochem Parasitol (2008) 1.81
Nitric oxide signaling: no longer simply on or off. Trends Biochem Sci (2006) 1.79
Conical intersection dynamics of the primary photoisomerization event in vision. Nature (2010) 1.78
Retinal counterion switch in the photoactivation of the G protein-coupled receptor rhodopsin. Proc Natl Acad Sci U S A (2003) 1.77
Toward 'omic scale metabolite profiling: a dual separation-mass spectrometry approach for coverage of lipid and central carbon metabolism. Anal Chem (2013) 1.76
Integrated microfluidic bioprocessor for single-cell gene expression analysis. Proc Natl Acad Sci U S A (2008) 1.73
Structure and regulation of soluble guanylate cyclase. Annu Rev Biochem (2012) 1.72
High-throughput single copy DNA amplification and cell analysis in engineered nanoliter droplets. Anal Chem (2008) 1.71
Design and characterization of an active site selective caspase-3 transnitrosating agent. ACS Chem Biol (2006) 1.67
High-performance single cell genetic analysis using microfluidic emulsion generator arrays. Anal Chem (2010) 1.64
Femtosecond broadband stimulated Raman: a new approach for high-performance vibrational spectroscopy. Appl Spectrosc (2003) 1.60
Femtosecond broadband stimulated Raman spectroscopy: Apparatus and methods. Rev Sci Instrum (2004) 1.55
Ultrafast excited-state isomerization in phytochrome revealed by femtosecond stimulated Raman spectroscopy. Proc Natl Acad Sci U S A (2009) 1.53
Thioredoxin is required for S-nitrosation of procaspase-3 and the inhibition of apoptosis in Jurkat cells. Proc Natl Acad Sci U S A (2007) 1.52
Redox-inactive metals modulate the reduction potential in heterometallic manganese-oxido clusters. Nat Chem (2013) 1.49
Expression and characterization of the catalytic domains of soluble guanylate cyclase: interaction with the heme domain. Biochemistry (2005) 1.48
Biochemistry of soluble guanylate cyclase. Handb Exp Pharmacol (2009) 1.47
Interference with heme binding to histidine-rich protein-2 as an antimalarial strategy. Chem Biol (2002) 1.42
Probing the function of heme distortion in the H-NOX family. ACS Chem Biol (2008) 1.42
A dimeric kinase assembly underlying autophosphorylation in the p21 activated kinases. J Mol Biol (2006) 1.39
Programmable cell adhesion encoded by DNA hybridization. Angew Chem Int Ed Engl (2006) 1.39
High-temperature microfluidic synthesis of CdSe nanocrystals in nanoliter droplets. J Am Chem Soc (2005) 1.35
Energy-dispersive X-ray emission spectroscopy using an X-ray free-electron laser in a shot-by-shot mode. Proc Natl Acad Sci U S A (2012) 1.33
Anti-stokes Raman study of vibrational cooling dynamics in the primary photochemistry of rhodopsin. J Phys Chem A (2002) 1.32
Ligand specificity of H-NOX domains: from sGC to bacterial NO sensors. J Inorg Biochem (2005) 1.32
Mycobacteria inhibit nitric oxide synthase recruitment to phagosomes during macrophage infection. Infect Immun (2004) 1.31
Direct cell surface modification with DNA for the capture of primary cells and the investigation of myotube formation on defined patterns. Langmuir (2009) 1.30
A multi-crystal wavelength dispersive x-ray spectrometer. Rev Sci Instrum (2012) 1.30
High throughput DNA sequencing with a microfabricated 96-lane capillary array electrophoresis bioprocessor. Proc Natl Acad Sci U S A (2002) 1.30
Metal binding characteristics and role of iron oxidation in the ferric uptake regulator from Escherichia coli. Biochemistry (2005) 1.28
Ligand discrimination in soluble guanylate cyclase and the H-NOX family of heme sensor proteins. Curr Opin Chem Biol (2005) 1.28
Theory of femtosecond stimulated Raman spectroscopy. J Chem Phys (2004) 1.27
The crystal structure of the catalytic domain of a eukaryotic guanylate cyclase. BMC Struct Biol (2008) 1.26
Nitric oxide modulates bacterial biofilm formation through a multicomponent cyclic-di-GMP signaling network. Mol Cell (2012) 1.25
Quantitative proteomic approach for cellulose degradation by Neurospora crassa. J Proteome Res (2011) 1.25
Function of extracellular loop 2 in rhodopsin: glutamic acid 181 modulates stability and absorption wavelength of metarhodopsin II. Biochemistry (2002) 1.24
Tonic and acute nitric oxide signaling through soluble guanylate cyclase is mediated by nonheme nitric oxide, ATP, and GTP. Proc Natl Acad Sci U S A (2005) 1.24
Determinants of regioselective hydroxylation in the fungal polysaccharide monooxygenases. J Am Chem Soc (2013) 1.23
A structural basis for H-NOX signaling in Shewanella oneidensis by trapping a histidine kinase inhibitory conformation. Proc Natl Acad Sci U S A (2009) 1.22
Intersubunit capture of regulatory segments is a component of cooperative CaMKII activation. Nat Struct Mol Biol (2010) 1.21
Vibrational Relaxation in beta-Carotene Probed by Picosecond Stokes and Anti-Stokes Resonance Raman Spectroscopy. J Phys Chem A (2002) 1.21
Characterization of functional heme domains from soluble guanylate cyclase. Biochemistry (2005) 1.21
Development and evaluation of a microdevice for amino acid biomarker detection and analysis on Mars. Proc Natl Acad Sci U S A (2005) 1.20
Mapping GFP structure evolution during proton transfer with femtosecond Raman spectroscopy. Nature (2009) 1.20
Integrated hydrogenated amorphous Si photodiode detector for microfluidic bioanalytical devices. Anal Chem (2003) 1.20
Src phosphorylates Cas on tyrosine 253 to promote migration of transformed cells. J Biol Chem (2003) 1.20
Integrated capture, concentration, polymerase chain reaction, and capillary electrophoretic analysis of pathogens on a chip. Anal Chem (2009) 1.20
Mechanisms of S-nitrosothiol formation and selectivity in nitric oxide signaling. Curr Opin Chem Biol (2012) 1.19
Shewanella oneidensis MR-1 H-NOX regulation of a histidine kinase by nitric oxide. Biochemistry (2007) 1.18
Microfabricated 384-lane capillary array electrophoresis bioanalyzer for ultrahigh-throughput genetic analysis. Anal Chem (2002) 1.17
Subcellular targeting and differential S-nitrosylation of endothelial nitric-oxide synthase. J Biol Chem (2005) 1.16
Dissociation of nitric oxide from soluble guanylate cyclase and heme-nitric oxide/oxygen binding domain constructs. J Biol Chem (2006) 1.16
An Escherichia coli expression-based method for heme substitution. Nat Methods (2006) 1.15
A nitric oxide/cysteine interaction mediates the activation of soluble guanylate cyclase. Proc Natl Acad Sci U S A (2009) 1.14
Nitric oxide binding to prokaryotic homologs of the soluble guanylate cyclase beta1 H-NOX domain. J Biol Chem (2006) 1.13
Microchip bioprocessor for integrated nanovolume sample purification and DNA sequencing. Anal Chem (2002) 1.13
Microfluidic devices for DNA sequencing: sample preparation and electrophoretic analysis. Curr Opin Biotechnol (2003) 1.12
A digital microfluidic platform for the automation of quantitative biomolecular assays. Lab Chip (2009) 1.11
Cellulose degradation by polysaccharide monooxygenases. Annu Rev Biochem (2015) 1.11
Lifting gate polydimethylsiloxane microvalves and pumps for microfluidic control. Anal Chem (2012) 1.10
Sre1, an iron-modulated GATA DNA-binding protein of iron-uptake genes in the fungal pathogen Histoplasma capsulatum. Biochemistry (2008) 1.08
Integrated microfluidic systems for high-performance genetic analysis. Trends Biotechnol (2009) 1.07
Self-assembled cellular microarrays patterned using DNA barcodes. Lab Chip (2007) 1.06
Single-cell multiplex gene detection and sequencing with microfluidically generated agarose emulsions. Angew Chem Int Ed Engl (2011) 1.06
H-NOX-mediated nitric oxide sensing modulates symbiotic colonization by Vibrio fischeri. Proc Natl Acad Sci U S A (2010) 1.06
Time-resolved resonance Raman analysis of chromophore structural changes in the formation and decay of rhodopsin's BSI intermediate. J Am Chem Soc (2002) 1.05
Higher-order interactions bridge the nitric oxide receptor and catalytic domains of soluble guanylate cyclase. Proc Natl Acad Sci U S A (2013) 1.05
Heme binding to the histidine-rich protein II from Plasmodium falciparum. Biochemistry (2005) 1.05
Surface multiheme c-type cytochromes from Thermincola potens and implications for respiratory metal reduction by Gram-positive bacteria. Proc Natl Acad Sci U S A (2012) 1.04