Published in Nat Rev Genet on November 01, 2005
Methods for meta-analysis in genetic association studies: a review of their potential and pitfalls. Hum Genet (2007) 3.92
Data quality control in genetic case-control association studies. Nat Protoc (2010) 3.68
Research review: DSM-V conduct disorder: research needs for an evidence base. J Child Psychol Psychiatry (2008) 2.48
STrengthening the REporting of Genetic Association Studies (STREGA): an extension of the STROBE statement. PLoS Med (2009) 2.39
Parentage and sibship inference from multilocus genotype data under polygamy. Genetics (2009) 2.34
lobSTR: A short tandem repeat profiler for personal genomes. Genome Res (2012) 2.08
Required sample size and nonreplicability thresholds for heterogeneous genetic associations. Proc Natl Acad Sci U S A (2008) 1.84
STrengthening the REporting of Genetic Association studies (STREGA)--an extension of the STROBE statement. Eur J Clin Invest (2009) 1.82
Three decades of farmed escapees in the wild: a spatio-temporal analysis of Atlantic salmon population genetic structure throughout Norway. PLoS One (2012) 1.77
Strengthening the reporting of genetic association studies (STREGA): an extension of the STROBE Statement. Hum Genet (2009) 1.47
Insertion-deletion polymorphisms (indels) as genetic markers in natural populations. BMC Genet (2008) 1.43
Maximum-likelihood estimation of allelic dropout and false allele error rates from microsatellite genotypes in the absence of reference data. Genetics (2006) 1.37
Cryptic speciation in a benthic isopod from Patagonian and Falkland Island waters and the impact of glaciations on its population structure. Front Zool (2008) 1.32
A comparison of SNP and STR loci for delineating population structure and performing individual genetic assignment. BMC Genet (2010) 1.32
Population genomics and speciation. Genetica (2008) 1.26
Longevity of clonal plants: why it matters and how to measure it. Ann Bot (2010) 1.26
Strengthening the reporting of genetic association studies (STREGA): an extension of the STROBE statement. Eur J Epidemiol (2009) 1.25
Simultaneous discovery and testing of deletions for disease association in SNP genotyping studies. Am J Hum Genet (2007) 1.23
A multiscale analysis of gene flow for the New England cottontail, an imperiled habitat specialist in a fragmented landscape. Ecol Evol (2014) 1.23
Evaluating the impact of scoring parameters on the structure of intra-specific genetic variation using RawGeno, an R package for automating AFLP scoring. BMC Bioinformatics (2009) 1.21
Effect of altitude on the genetic structure of an Alpine grass, Poa hiemata. Ann Bot (2009) 1.19
The landscape of human STR variation. Genome Res (2014) 1.19
Reporting of human genome epidemiology (HuGE) association studies: an empirical assessment. BMC Med Res Methodol (2008) 1.17
Molecular epidemiology of Schistosoma mansoni: a robust, high-throughput method to assess multiple microsatellite markers from individual miracidia. Infect Genet Evol (2008) 1.16
In vitro vs in silico detected SNPs for the development of a genotyping array: what can we learn from a non-model species? PLoS One (2010) 1.11
Multiplexed SNP typing of ancient DNA clarifies the origin of Andaman mtDNA haplogroups amongst South Asian tribal populations. PLoS One (2006) 1.11
Multiple near-identical genotypes of Schistosoma japonicum can occur in snails and have implications for population-genetic analyses. Int J Parasitol (2008) 1.11
A comparison of SNPs and microsatellites as linkage mapping markers: lessons from the zebra finch (Taeniopygia guttata). BMC Genomics (2010) 1.10
Application of homozygosity haplotype analysis to genetic mapping with high-density SNP genotype data. PLoS One (2009) 1.09
Ecological speciation in postglacial European whitefish: rapid adaptive radiations into the littoral, pelagic, and profundal lake habitats. Ecol Evol (2013) 1.07
Repeated trans-watershed hybridization among haplochromine cichlids (Cichlidae) was triggered by Neogene landscape evolution. Proc Biol Sci (2012) 1.04
Reduced fitness of Atlantic salmon released in the wild after one generation of captive breeding. Evol Appl (2012) 1.03
Computationally efficient sibship and parentage assignment from multilocus marker data. Genetics (2012) 1.03
Long lasting persistence of Bacillus thuringiensis Subsp. israelensis (Bti) in mosquito natural habitats. PLoS One (2008) 1.03
Population substructure in Finland and Sweden revealed by the use of spatial coordinates and a small number of unlinked autosomal SNPs. BMC Genet (2008) 1.02
Genetic characterisation of farmed rainbow trout in Norway: intra- and inter-strain variation reveals potential for identification of escapees. BMC Genet (2008) 1.02
Computing power and sample size for case-control association studies with copy number polymorphism: application of mixture-based likelihood ratio test. PLoS One (2008) 1.01
Detection of outlier loci and their utility for fisheries management. Evol Appl (2011) 0.99
Performance of whole-genome amplified DNA isolated from serum and plasma on high-density single nucleotide polymorphism arrays. J Mol Diagn (2008) 0.98
Genetic differentiation, behavioural reproductive isolation and mixis cues in three sibling species of monogonont rotifers. Freshw Biol (2010) 0.98
Impact of compounding error on strategies for subtyping pathogenic bacteria. Foodborne Pathog Dis (2008) 0.98
Reducing pervasive false-positive identical-by-descent segments detected by large-scale pedigree analysis. Mol Biol Evol (2014) 0.98
Assessing DNA barcoding as a tool for species identification and data quality control. PLoS One (2013) 0.97
Accurate typing of short tandem repeats from genome-wide sequencing data and its applications. Genome Res (2015) 0.96
Applying evolutionary genetics to schistosome epidemiology. Infect Genet Evol (2010) 0.95
Missing call bias in high-throughput genotyping. BMC Genomics (2009) 0.94
Reconstructing eight decades of genetic variation in an isolated Danish population of the large blue butterfly Maculinea arion. BMC Evol Biol (2011) 0.93
Measuring individual inbreeding in the age of genomics: marker-based measures are better than pedigrees. Heredity (Edinb) (2015) 0.93
Smarter clustering methods for SNP genotype calling. Bioinformatics (2008) 0.93
A high-density simple sequence repeat-based genetic linkage map of switchgrass. G3 (Bethesda) (2012) 0.92
Rapid genetic and epigenetic alterations under intergeneric genomic shock in newly synthesized Chrysanthemum morifolium x Leucanthemum paludosum hybrids (Asteraceae). Genome Biol Evol (2014) 0.92
Microsatellite standardization and evaluation of genotyping error in a large multi-partner research programme for conservation of Atlantic salmon (Salmo salar L.). Genetica (2011) 0.92
Genotyping errors in a calibrated DNA register: implications for identification of individuals. BMC Genet (2011) 0.91
Genome-wide survey and analysis of microsatellites in giant panda (Ailuropoda melanoleuca), with a focus on the applications of a novel microsatellite marker system. BMC Genomics (2015) 0.90
Integration of SNP genotyping confidence scores in IBD inference. Bioinformatics (2011) 0.90
Surviving with low genetic diversity: the case of albatrosses. Proc Biol Sci (2007) 0.90
A platform for efficient genotyping in Musa using microsatellite markers. AoB Plants (2011) 0.90
Birds in space and time: genetic changes accompanying anthropogenic habitat fragmentation in the endangered black-capped vireo (Vireo atricapilla). Evol Appl (2012) 0.90
Multilocus detection of wolf x dog hybridization in italy, and guidelines for marker selection. PLoS One (2014) 0.89
Wide variation in spatial genetic structure between natural populations of the European beech (Fagus sylvatica) and its implications for SGS comparability. Heredity (Edinb) (2012) 0.89
Characterizing the physical and genetic structure of the lodgepole pine × jack pine hybrid zone: mosaic structure and differential introgression. Evol Appl (2012) 0.89
Incorporating duplicate genotype data into linear trend tests of genetic association: methods and cost-effectiveness. Stat Appl Genet Mol Biol (2009) 0.89
Seq4SNPs: new software for retrieval of multiple, accurately annotated DNA sequences, ready formatted for SNP assay design. BMC Bioinformatics (2009) 0.88
The dispersion and detection patterns of mtDNA-assigned red fox Vulpes vulpes scats in Tasmania are anomalous. J Appl Ecol (2014) 0.88
GMFilter and SXTestPlate: software tools for improving the SNPlex genotyping system. BMC Bioinformatics (2009) 0.88
Genotyping-by-sequencing for Populus population genomics: an assessment of genome sampling patterns and filtering approaches. PLoS One (2014) 0.88
Quantifying separation and similarity in a Saccharomyces cerevisiae metapopulation. ISME J (2014) 0.88
Molecular, genetic and transcriptional evidence for a role of VvAGL11 in stenospermocarpic seedlessness in grapevine. BMC Plant Biol (2011) 0.88
Influence of the serotonin transporter 5HTTLPR polymorphism on symptom severity in irritable bowel syndrome. PLoS One (2013) 0.88
A maximum-likelihood method to correct for allelic dropout in microsatellite data with no replicate genotypes. Genetics (2012) 0.88
Genetic and DNA methylation changes in cotton (Gossypium) genotypes and tissues. PLoS One (2014) 0.86
Identification of pummelo cultivars by using a panel of 25 selected SNPs and 12 DNA segments. PLoS One (2014) 0.86
A Bayesian method for the joint estimation of outcrossing rate and inbreeding depression. Heredity (Edinb) (2012) 0.85
Impact of genotyping errors on the type I error rate and the power of haplotype-based association methods. BMC Genet (2009) 0.85
Time and origin of cichlid colonization of the lower Congo rapids. PLoS One (2011) 0.85
Individual identification and genetic variation of lions (Panthera leo) from two protected areas in Nigeria. PLoS One (2014) 0.84
Genetic polymorphisms of the RAS-cytokine pathway and chronic kidney disease. Pediatr Nephrol (2008) 0.84
Cooperative investment in public goods is kin directed in communal nests of social birds. Ecol Lett (2014) 0.84
Impact of whole-genome amplification on the reliability of pre-transfer cattle embryo breeding value estimates. BMC Genomics (2014) 0.84
Development and characterization of polymorphic EST-SSR and genomic SSR markers for Tibetan annual wild barley. PLoS One (2014) 0.84
Landscape features influence gene flow as measured by cost-distance and genetic analyses: a case study for giant pandas in the Daxiangling and Xiaoxiangling Mountains. BMC Genet (2010) 0.83
Hardy-Weinberg analysis of a large set of published association studies reveals genotyping error and a deficit of heterozygotes across multiple loci. Hum Genomics (2008) 0.83
A quality control algorithm for filtering SNPs in genome-wide association studies. Bioinformatics (2010) 0.83
Host plant use by competing acacia-ants: mutualists monopolize while parasites share hosts. PLoS One (2012) 0.83
Incipient allochronic speciation by climatic disruption of the reproductive period. Proc Biol Sci (2009) 0.82
Successive invasion-mediated interspecific hybridizations and population structure in the endangered cichlid Oreochromis mossambicus. PLoS One (2013) 0.82
Genotyping error detection in samples of unrelated individuals without replicate genotyping. Hum Hered (2008) 0.82
Two-phase and family-based designs for next-generation sequencing studies. Front Genet (2013) 0.82
Reproducibility of Genotypes as Measured by the Affymetrix GeneChip® 100K Human Mapping Array Set. Comput Stat Data Anal (2008) 0.81
Loss of genetic diversity and inbreeding in Kashmir red deer (Cervus elaphus hanglu) of Dachigam National Park, Jammu & Kashmir, India. BMC Res Notes (2013) 0.81
Niche divergence promotes rapid diversification of East African sky island white-eyes (Aves: Zosteropidae). Mol Ecol (2014) 0.81
Estimating the single nucleotide polymorphism genotype misclassification from routine double measurements in a large epidemiologic sample. Am J Epidemiol (2008) 0.81
High potential for using DNA from ancient herring bones to inform modern fisheries management and conservation. PLoS One (2012) 0.81
Amplified fragment length homoplasy: in silico analysis for model and non-model species. BMC Genomics (2010) 0.81
Fat depot-specific mRNA expression of novel loci associated with waist-hip ratio. Int J Obes (Lond) (2013) 0.81
A new likelihood estimator and its comparison with moment estimators of individual genome-wide diversity. Heredity (Edinb) (2011) 0.80
Polymorphisms in the RNASE3 gene are associated with susceptibility to cerebral malaria in Ghanaian children. PLoS One (2011) 0.80
Microsatellite DNA suggests that group size affects sex-biased dispersal patterns in red colobus monkeys. Am J Primatol (2013) 0.80
The power and promise of population genomics: from genotyping to genome typing. Nat Rev Genet (2003) 6.13
DNA barcoding for ecologists. Trends Ecol Evol (2008) 5.08
Species detection using environmental DNA from water samples. Biol Lett (2008) 4.96
Ancient biomolecules from deep ice cores reveal a forested southern Greenland. Science (2007) 3.79
Who is eating what: diet assessment using next generation sequencing. Mol Ecol (2011) 3.53
The origin of European cattle: evidence from modern and ancient DNA. Proc Natl Acad Sci U S A (2006) 3.09
ITS as an environmental DNA barcode for fungi: an in silico approach reveals potential PCR biases. BMC Microbiol (2010) 2.95
Persistence of environmental DNA in freshwater ecosystems. PLoS One (2011) 2.75
New perspectives in diet analysis based on DNA barcoding and parallel pyrosequencing: the trnL approach. Mol Ecol Resour (2008) 2.58
Environmental DNA. Mol Ecol (2012) 2.36
Glacial survival of boreal trees in northern Scandinavia. Science (2012) 2.28
The goat domestication process inferred from large-scale mitochondrial DNA analysis of wild and domestic individuals. Proc Natl Acad Sci U S A (2008) 2.07
Frequent long-distance plant colonization in the changing Arctic. Science (2007) 2.06
An in silico approach for the evaluation of DNA barcodes. BMC Genomics (2010) 1.99
Explorative genome scan to detect candidate loci for adaptation along a gradient of altitude in the common frog (Rana temporaria). Mol Biol Evol (2006) 1.90
Prey preference of snow leopard (Panthera uncia) in South Gobi, Mongolia. PLoS One (2012) 1.76
Large-scale mitochondrial DNA analysis of the domestic goat reveals six haplogroups with high diversity. PLoS One (2007) 1.72
Analysing diet of small herbivores: the efficiency of DNA barcoding coupled with high-throughput pyrosequencing for deciphering the composition of complex plant mixtures. Front Zool (2009) 1.68
African origins of the domestic donkey. Science (2004) 1.68
Universal DNA-based methods for assessing the diet of grazing livestock and wildlife from feces. J Agric Food Chem (2009) 1.67
Divergent mtDNA lineages of goats in an Early Neolithic site, far from the initial domestication areas. Proc Natl Acad Sci U S A (2006) 1.66
Carnivore diet analysis based on next-generation sequencing: application to the leopard cat (Prionailurus bengalensis) in Pakistan. Mol Ecol (2012) 1.65
AFLP markers reveal high clonal diversity and extreme longevity in four key arctic-alpine species. Mol Ecol (2011) 1.49
New generation sequencers as a tool for genotyping of highly polymorphic multilocus MHC system. Mol Ecol Resour (2009) 1.44
Genetic diversity of European cattle breeds highlights the conservation value of traditional unselected breeds with high effective population size. Mol Ecol (2009) 1.43
Use of amplified fragment length polymorphism (AFLP) markers in surveys of vertebrate diversity. Methods Enzymol (2005) 1.33
ecoPrimers: inference of new DNA barcode markers from whole genome sequence analysis. Nucleic Acids Res (2011) 1.33
Tracking genes of ecological relevance using a genome scan in two independent regional population samples of Arabis alpina. Mol Ecol (2010) 1.31
Replication levels, false presences and the estimation of the presence/absence from eDNA metabarcoding data. Mol Ecol Resour (2014) 1.27
Genetic consequences of climate change for northern plants. Proc Biol Sci (2012) 1.25
Importance of accounting for detection heterogeneity when estimating abundance: the case of French wolves. Conserv Biol (2010) 1.22
Forecasting changes in population genetic structure of alpine plants in response to global warming. Mol Ecol (2012) 1.22
Spatial analysis method (sam): a software tool combining molecular and environmental data to identify candidate loci for selection. Mol Ecol Resour (2008) 1.21
A comparative study of ancient sedimentary DNA, pollen and macrofossils from permafrost sediments of northern Siberia reveals long-term vegetational stability. Mol Ecol (2012) 1.20
Population adaptive index: a new method to help measure intraspecific genetic diversity and prioritize populations for conservation. Conserv Biol (2007) 1.18
New environmental metabarcodes for analysing soil DNA: potential for studying past and present ecosystems. Mol Ecol (2012) 1.18
From the Apennines to the Alps: colonization genetics of the naturally expanding Italian wolf (Canis lupus) population. Mol Ecol (2007) 1.18
Effective population size is positively correlated with levels of adaptive divergence among annual sunflowers. Mol Biol Evol (2010) 1.16
The dilemma of female mate selection in the brown bear, a species with sexually selected infanticide. Proc Biol Sci (2006) 1.14
Using AFLP to resolve phylogenetic relationships in a morphologically diversified plant species complex when nuclear and chloroplast sequences fail to reveal variability. Mol Phylogenet Evol (2003) 1.14
Genetic roadmap of the Arctic: plant dispersal highways, traffic barriers and capitals of diversity. New Phytol (2013) 1.14
Perspectives on the use of landscape genetics to detect genetic adaptive variation in the field. Mol Ecol (2010) 1.11
History or ecology? Substrate type as a major driver of spatial genetic structure in Alpine plants. Ecol Lett (2009) 1.11
Blocking human contaminant DNA during PCR allows amplification of rare mammal species from sedimentary ancient DNA. Mol Ecol (2011) 1.10
Evolutionary history of the genus Capra (Mammalia, Artiodactyla): discordance between mitochondrial DNA and Y-chromosome phylogenies. Mol Phylogenet Evol (2006) 1.05
Major histocompatibility complex class II compatibility, but not class I, predicts mate choice in a bird with highly developed olfaction. Proc Biol Sci (2012) 1.05
Genetic estimates of annual reproductive success in male brown bears: the effects of body size, age, internal relatedness and population density. J Anim Ecol (2007) 1.03
Evolution and taxonomy of the wild species of the genus Ovis (Mammalia, Artiodactyla, Bovidae). Mol Phylogenet Evol (2009) 1.01
Broad-scale adaptive genetic variation in alpine plants is driven by temperature and precipitation. Mol Ecol (2012) 0.97
Assessment of the food habits of the Moroccan dorcas gazelle in M'Sabih Talaa, west central Morocco, using the trnL approach. PLoS One (2012) 0.97
A DNA metabarcoding study of a primate dietary diversity and plasticity across its entire fragmented range. PLoS One (2013) 0.96
Comparative analysis of response to selection with three insecticides in the dengue mosquito Aedes aegypti using mRNA sequencing. BMC Genomics (2014) 0.96
A road map for molecular ecology. Mol Ecol (2013) 0.95
Tracking earthworm communities from soil DNA. Mol Ecol (2012) 0.94
Selection criteria for scoring amplified fragment length polymorphisms (AFLPs) positively affect the reliability of population genetic parameter estimates. Genome (2010) 0.94
Genome scan in the mosquito Aedes rusticus: population structure and detection of positive selection after insecticide treatment. Mol Ecol (2009) 0.93
Phylogeography and conservation genetics of a giant lobelia (Lobelia giberroa) in Ethiopian and Tropical East African mountains. Mol Ecol (2007) 0.93
Unveiling the diet of elusive rainforest herbivores in next generation sequencing era? The tapir as a case study. PLoS One (2013) 0.91
A universal method for the detection and identification of Aphidiinae parasitoids within their aphid hosts. Mol Ecol Resour (2012) 0.91
Plant functional traits reveal the relative contribution of habitat and food preferences to the diet of grasshoppers. Oecologia (2013) 0.90
Allele identification for transcriptome-based population genomics in the invasive plant Centaurea solstitialis. G3 (Bethesda) (2013) 0.89
Fungal palaeodiversity revealed using high-throughput metabarcoding of ancient DNA from arctic permafrost. Environ Microbiol (2012) 0.88
Islands in the ice: detecting past vegetation on Greenlandic nunataks using historical records and sedimentary ancient DNA meta-barcoding. Mol Ecol (2011) 0.88
Evolution of major histocompatibility complex class I and class II genes in the brown bear. BMC Evol Biol (2012) 0.86
Gene expression patterns and sequence polymorphisms associated with mosquito resistance to Bacillus thuringiensis israelensis toxins. BMC Genomics (2014) 0.82
Authenticated DNA from ancient wood remains. Ann Bot (2006) 0.81
Improvements of polymerase chain reaction and capillary electrophoresis single-strand conformation polymorphism methods in microbial ecology: toward a high-throughput method for microbial diversity studies in soil. Microb Ecol (2007) 0.80
Fast and efficient DNA-based method for winter diet analysis from stools of three cervids: moose, red deer, and roe deer. Acta Theriol (Warsz) (2013) 0.79
Two methods to easily obtain nucleotide sequences from AFLP loci of interest. Methods Mol Biol (2012) 0.77
A dig into the past mitochondrial diversity of Corsican goats reveals the influence of secular herding practices. PLoS One (2012) 0.77
Reconstructing long-term human impacts on plant communities: an ecological approach based on lake sediment DNA. Mol Ecol (2015) 0.77
Allele identification in assembled genomic sequence datasets. Methods Mol Biol (2012) 0.76
Impaired liver function in Xenopus tropicalis exposed to benzo[a]pyrene: transcriptomic and metabolic evidence. BMC Genomics (2014) 0.75
Correction: Deep-Sea, Deep-Sequencing: Metabarcoding Extracellular DNA from Sediments of Marine Canyons. PLoS One (2016) 0.75
Exonuclease activity of proofreading DNA polymerases is at the origin of artifacts in molecular profiling studies. Electrophoresis (2008) 0.75