Published in FEBS Lett on April 18, 2009
The Mammalian Phenotype Ontology as a unifying standard for experimental and high-throughput phenotyping data. Mamm Genome (2012) 2.43
Transcriptome analysis of Pacific white shrimp (Litopenaeus vannamei) hepatopancreas in response to Taura syndrome Virus (TSV) experimental infection. PLoS One (2013) 1.05
Transcriptome analysis of indole-3-butyric acid-induced adventitious root formation in nodal cuttings of Camellia sinensis (L.). PLoS One (2014) 0.85
Small RNA cloning. Methods Mol Biol (2010) 0.83
Mice lacking Gad2 show altered behavioral effects of ethanol, flurazepam and gabaxadol. Addict Biol (2010) 0.83
Transcriptome Analysis Reveals Key Flavonoid 3'-Hydroxylase and Flavonoid 3',5'-Hydroxylase Genes in Affecting the Ratio of Dihydroxylated to Trihydroxylated Catechins in Camellia sinensis. PLoS One (2015) 0.79
Dynamics of Yersinia pestis and its antibody response in great gerbils (Rhombomys opimus) by subcutaneous infection. PLoS One (2012) 0.79
The genetics of gene expression in complex mouse crosses as a tool to study the molecular underpinnings of behavior traits. Mamm Genome (2013) 0.77
Transcriptional response of Musca domestica larvae to bacterial infection. PLoS One (2014) 0.77
Detection and quantitative analysis of small RNAs by PCR. Methods Mol Biol (2010) 0.76
Phylogenetic shadowing and computational identification of human microRNA genes. Cell (2005) 13.24
Diversity of microRNAs in human and chimpanzee brain. Nat Genet (2006) 6.57
Progress and prospects in rat genetics: a community view. Nat Genet (2008) 6.01
Mammalian mirtron genes. Mol Cell (2007) 5.75
Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis. Genome Res (2006) 5.23
The microRNA-producing enzyme Dicer1 is essential for zebrafish development. Nat Genet (2003) 4.97
Limitations and possibilities of small RNA digital gene expression profiling. Nat Methods (2009) 4.34
Approaches to microRNA discovery. Nat Genet (2006) 4.32
Functional repair of CFTR by CRISPR/Cas9 in intestinal stem cell organoids of cystic fibrosis patients. Cell Stem Cell (2013) 3.97
Disclosure of individual genetic data to research participants: the debate reconsidered. Trends Genet (2010) 3.83
Efficient target-selected mutagenesis in zebrafish. Genome Res (2003) 3.61
A systematic genome-wide analysis of zebrafish protein-coding gene function. Nature (2013) 3.52
Accurate SNP and mutation detection by targeted custom microarray-based genomic enrichment of short-fragment sequencing libraries. Nucleic Acids Res (2010) 3.23
Genome-wide pattern of TCF7L2/TCF4 chromatin occupancy in colorectal cancer cells. Mol Cell Biol (2008) 3.02
SNP and haplotype mapping for genetic analysis in the rat. Nat Genet (2008) 2.96
The Wnt/beta-catenin pathway regulates cardiac valve formation. Nature (2003) 2.89
Constitutional chromothripsis rearrangements involve clustered double-stranded DNA breaks and nonhomologous repair mechanisms. Cell Rep (2012) 2.67
Cloning and expression of new microRNAs from zebrafish. Nucleic Acids Res (2006) 2.58
Diabetes risk gene and Wnt effector Tcf7l2/TCF4 controls hepatic response to perinatal and adult metabolic demand. Cell (2012) 2.45
Chromothripsis as a mechanism driving complex de novo structural rearrangements in the germline. Hum Mol Genet (2011) 2.43
Ethical, legal, and counseling challenges surrounding the return of genetic results in oncology. J Clin Oncol (2013) 2.36
Genetic variation in the zebrafish. Genome Res (2006) 2.22
Distribution and functional impact of DNA copy number variation in the rat. Nat Genet (2008) 2.20
Chromothripsis is a common mechanism driving genomic rearrangements in primary and metastatic colorectal cancer. Genome Biol (2011) 2.11
Mouse microRNA profiles determined with a new and sensitive cloning method. Nucleic Acids Res (2006) 1.94
Mutagenic capacity of endogenous G4 DNA underlies genome instability in FANCJ-defective C. elegans. Curr Biol (2008) 1.80
Mutation discovery by targeted genomic enrichment of multiplexed barcoded samples. Nat Methods (2010) 1.77
Extensive localization of long noncoding RNAs to the cytosol and mono- and polyribosomal complexes. Genome Biol (2014) 1.66
Primary colorectal cancers and their subsequent hepatic metastases are genetically different: implications for selection of patients for targeted treatment. Clin Cancer Res (2011) 1.64
Repertoire and evolution of miRNA genes in four divergent nematode species. Genome Res (2009) 1.64
Generation of gene knockouts and mutant models in the laboratory rat by ENU-driven target-selected mutagenesis. Pharmacogenet Genomics (2006) 1.60
CONREAL: conserved regulatory elements anchored alignment algorithm for identification of transcription factor binding sites by phylogenetic footprinting. Genome Res (2003) 1.57
Zebrafish as a cancer model. Mol Cancer Res (2008) 1.55
Genome sequencing reveals loci under artificial selection that underlie disease phenotypes in the laboratory rat. Cell (2013) 1.53
Dominant missense mutations in ABCC9 cause Cantú syndrome. Nat Genet (2012) 1.50
Melanocortin receptor 4 deficiency affects body weight regulation, grooming behavior, and substrate preference in the rat. Obesity (Silver Spring) (2011) 1.50
Zebrafish development and regeneration: new tools for biomedical research. Int J Dev Biol (2009) 1.46
The genome sequence of the spontaneously hypertensive rat: Analysis and functional significance. Genome Res (2010) 1.45
Angiogenin variants in Parkinson disease and amyotrophic lateral sclerosis. Ann Neurol (2011) 1.45
Single nucleotide polymorphisms associated with rat expressed sequences. Genome Res (2004) 1.43
Systematic biases in DNA copy number originate from isolation procedures. Genome Biol (2013) 1.39
Multiplexed array-based and in-solution genomic enrichment for flexible and cost-effective targeted next-generation sequencing. Nat Protoc (2011) 1.36
Combined sequence-based and genetic mapping analysis of complex traits in outbred rats. Nat Genet (2013) 1.30
Generation of medaka gene knockout models by target-selected mutagenesis. Genome Biol (2006) 1.30
Target-selected mutagenesis of the rat. Genomics (2004) 1.26
E2F7 represses a network of oscillating cell cycle genes to control S-phase progression. Nucleic Acids Res (2011) 1.26
GENOTRACE: cDNA-based local GENOme assembly from TRACE archives. Bioinformatics (2002) 1.25
CONREAL web server: identification and visualization of conserved transcription factor binding sites. Nucleic Acids Res (2005) 1.25
Genome-wide analysis of FOXO3 mediated transcription regulation through RNA polymerase II profiling. Mol Syst Biol (2013) 1.24
Planar cell polarity defects and defective Vangl2 trafficking in mutants for the COPII gene Sec24b. Development (2010) 1.23
Comparing genome-wide chromatin profiles using ChIP-chip or ChIP-seq. Bioinformatics (2010) 1.18
Small RNA expression and strain specificity in the rat. BMC Genomics (2010) 1.16
Genomic and transcriptomic plasticity in treatment-naive ovarian cancer. Genome Res (2013) 1.15
High-throughput target-selected gene inactivation in zebrafish. Methods Cell Biol (2011) 1.15
Expanding the spectrum of phenotypes associated with germline PIGA mutations: a child with developmental delay, accelerated linear growth, facial dysmorphisms, elevated alkaline phosphatase, and progressive CNS abnormalities. Am J Med Genet A (2013) 1.14
Improved generation of rat gene knockouts by target-selected mutagenesis in mismatch repair-deficient animals. BMC Genomics (2008) 1.14
Dominant-negative ALK2 allele associates with congenital heart defects. Circulation (2009) 1.14
Haplotype block structure is conserved across mammals. PLoS Genet (2006) 1.13
Efficient double fragmentation ChIP-seq provides nucleotide resolution protein-DNA binding profiles. PLoS One (2010) 1.12
High-throughput semiquantitative analysis of insertional mutations in heterogeneous tumors. Genome Res (2011) 1.12
Identification of factors required for meristem function in Arabidopsis using a novel next generation sequencing fast forward genetics approach. BMC Genomics (2011) 1.10
Serotonin transporter deficiency in rats improves inhibitory control but not behavioural flexibility. Eur J Neurosci (2007) 1.08
FUS mutations in familial amyotrophic lateral sclerosis in the Netherlands. Arch Neurol (2010) 1.08
Tracing the history of goat pastoralism: new clues from mitochondrial and Y chromosome DNA in North Africa. Mol Biol Evol (2009) 1.07
Serotonin transporter dosage modulates long-term decision-making in rat and human. Neuropharmacology (2008) 1.06
Chromothripsis in congenital disorders and cancer: similarities and differences. Curr Opin Cell Biol (2013) 1.05
Nucleosomal DNA binding drives the recognition of H3K36-methylated nucleosomes by the PSIP1-PWWP domain. Epigenetics Chromatin (2013) 1.05
Wnt-induced transcriptional activation is exclusively mediated by TCF/LEF. EMBO J (2014) 1.05
A deep sequencing approach to uncover the miRNOME in the human heart. PLoS One (2013) 1.04
Genomic DNA pooling strategy for next-generation sequencing-based rare variant discovery in abdominal aortic aneurysm regions of interest-challenges and limitations. J Cardiovasc Transl Res (2011) 1.04
RAP-1 and the RAL-1/exocyst pathway coordinate hypodermal cell organization in Caenorhabditis elegans. EMBO J (2007) 1.04
CASCAD: a database of annotated candidate single nucleotide polymorphisms associated with expressed sequences. BMC Genomics (2005) 1.03
Acute and constitutive increases in central serotonin levels reduce social play behaviour in peri-adolescent rats. Psychopharmacology (Berl) (2007) 1.03
Integrated genome-wide analysis of transcription factor occupancy, RNA polymerase II binding and steady-state RNA levels identify differentially regulated functional gene classes. Nucleic Acids Res (2011) 1.02
Discovery of variants unmasked by hemizygous deletions. Eur J Hum Genet (2012) 1.02
Genetic variation in coding regions between and within commonly used inbred rat strains. Genome Res (2004) 1.01
A functional screen identifies specific microRNAs capable of inhibiting human melanoma cell viability. PLoS One (2012) 1.00
miR-127 protects proximal tubule cells against ischemia/reperfusion: identification of kinesin family member 3B as miR-127 target. PLoS One (2012) 1.00
A genome-wide SNP panel for mapping and association studies in the rat. BMC Genomics (2008) 1.00
ENU mutagenesis to generate genetically modified rat models. Methods Mol Biol (2010) 1.00
The effect of COMT Val158 Met genotype on decision-making and preliminary findings on its interaction with the 5-HTTLPR in healthy females. Neuropharmacology (2008) 0.99
Efficient single nucleotide polymorphism discovery in laboratory rat strains using wild rat-derived SNP candidates. BMC Genomics (2005) 0.98
X-exome sequencing identifies a HDAC8 variant in a large pedigree with X-linked intellectual disability, truncal obesity, gynaecomastia, hypogonadism and unusual face. J Med Genet (2012) 0.97
NIPA1 polyalanine repeat expansions are associated with amyotrophic lateral sclerosis. Hum Mol Genet (2012) 0.97
Incomplete segregation of MYH11 variants with thoracic aortic aneurysms and dissections and patent ductus arteriosus. Eur J Hum Genet (2012) 0.95
Effect of vertical sleeve gastrectomy in melanocortin receptor 4-deficient rats. Am J Physiol Endocrinol Metab (2012) 0.95
Next-generation sequencing-based genome diagnostics across clinical genetics centers: implementation choices and their effects. Eur J Hum Genet (2015) 0.94
Lack of DNA mismatch repair protein MSH6 in the rat results in hereditary non-polyposis colorectal cancer-like tumorigenesis. Carcinogenesis (2008) 0.94
Homozygous and heterozygous p53 knockout rats develop metastasizing sarcomas with high frequency. Am J Pathol (2011) 0.93
Zebrafish with mutations in mismatch repair genes develop neurofibromas and other tumors. Cancer Res (2008) 0.93
Adaptations in pre- and postsynaptic 5-HT1A receptor function and cocaine supersensitivity in serotonin transporter knockout rats. Psychopharmacology (Berl) (2008) 0.93
Mlh1 deficiency in zebrafish results in male sterility and aneuploid as well as triploid progeny in females. Genetics (2007) 0.92
Identification of a rat model for usher syndrome type 1B by N-ethyl-N-nitrosourea mutagenesis-driven forward genetics. Genetics (2005) 0.92
Pmch expression during early development is critical for normal energy homeostasis. Am J Physiol Endocrinol Metab (2009) 0.92
The ter mutation in the rat Dnd1 gene initiates gonadal teratomas and infertility in both genders. PLoS One (2012) 0.90
Improving mammalian genome scaffolding using large insert mate-pair next-generation sequencing. BMC Genomics (2013) 0.90
Resolving the breakpoints of the 17q21.31 microdeletion syndrome with next-generation sequencing. Am J Hum Genet (2012) 0.90
Cell autonomous lipin 1 function is essential for development and maintenance of white and brown adipose tissue. Mol Cell Biol (2012) 0.90
Microalterations of inherently unstable genomic regions in rat mammary carcinomas as revealed by long oligonucleotide array-based comparative genomic hybridization. Cancer Res (2009) 0.89
A hypomorphic mutation in Lpin1 induces progressively improving neuropathy and lipodystrophy in the rat. J Biol Chem (2011) 0.89