Published in Genome Res on February 01, 2010
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A small-cell lung cancer genome with complex signatures of tobacco exposure. Nature (2009) 18.39
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Genome-wide detection and characterization of positive selection in human populations. Nature (2007) 17.27
Evolutionary and biomedical insights from the rhesus macaque genome. Science (2007) 16.21
High-resolution mapping and characterization of open chromatin across the genome. Cell (2008) 15.93
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Genome sequence of Aedes aegypti, a major arbovirus vector. Science (2007) 9.19
The BioPAX community standard for pathway data sharing. Nat Biotechnol (2010) 9.19
Complete Khoisan and Bantu genomes from southern Africa. Nature (2010) 9.06
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The DNA sequence of the human X chromosome. Nature (2005) 6.97
The ClinSeq Project: piloting large-scale genome sequencing for research in genomic medicine. Genome Res (2009) 6.83
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The mosaic structure of variation in the laboratory mouse genome. Nature (2002) 6.54
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Heritable individual-specific and allele-specific chromatin signatures in humans. Science (2010) 5.94
Systematic comparison of three genomic enrichment methods for massively parallel DNA sequencing. Genome Res (2010) 5.76
Genome analysis of the platypus reveals unique signatures of evolution. Nature (2008) 5.74
Genome-wide mapping of DNase hypersensitive sites using massively parallel signature sequencing (MPSS). Genome Res (2005) 5.71
The landscape of histone modifications across 1% of the human genome in five human cell lines. Genome Res (2007) 5.67
The NGS WikiBook: a dynamic collaborative online training effort with long-term sustainability. Brief Bioinform (2013) 5.67
Efficient storage of high throughput DNA sequencing data using reference-based compression. Genome Res (2011) 5.60
Immunity-related genes and gene families in Anopheles gambiae. Science (2002) 5.47
Co-evolution of a broadly neutralizing HIV-1 antibody and founder virus. Nature (2013) 5.35
Petabyte-scale innovations at the European Nucleotide Archive. Nucleic Acids Res (2008) 5.21
The genomic basis of adaptive evolution in threespine sticklebacks. Nature (2012) 5.20
Genome-wide nucleotide-level mammalian ancestor reconstruction. Genome Res (2008) 5.12
Improvements to services at the European Nucleotide Archive. Nucleic Acids Res (2009) 5.00
A physical map of the mouse genome. Nature (2002) 4.97
An integrated resource for genome-wide identification and analysis of human tissue-specific differentially methylated regions (tDMRs). Genome Res (2008) 4.84
Sequence features and chromatin structure around the genomic regions bound by 119 human transcription factors. Genome Res (2012) 4.80
Early-onset stroke and vasculopathy associated with mutations in ADA2. N Engl J Med (2014) 4.70
High-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells. Genome Res (2010) 4.69
A database and API for variation, dense genotyping and resequencing data. BMC Bioinformatics (2010) 4.68
Initial sequence and comparative analysis of the cat genome. Genome Res (2007) 4.67
Pebble and rock band: heuristic resolution of repeats and scaffolding in the velvet short-read de novo assembler. PLoS One (2009) 4.60
Secondary variants in individuals undergoing exome sequencing: screening of 572 individuals identifies high-penetrance mutations in cancer-susceptibility genes. Am J Hum Genet (2012) 4.45
Sense from sequence reads: methods for alignment and assembly. Nat Methods (2009) 4.44
Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity. Genome Res (2011) 4.43
Completing the map of human genetic variation. Nature (2007) 4.38
An intermediate grade of finished genomic sequence suitable for comparative analyses. Genome Res (2004) 4.38
An initial strategy for the systematic identification of functional elements in the human genome by low-redundancy comparative sequencing. Proc Natl Acad Sci U S A (2005) 4.38
Locus Reference Genomic sequences: an improved basis for describing human DNA variants. Genome Med (2010) 4.19
Local DNA topography correlates with functional noncoding regions of the human genome. Science (2009) 4.18
Insights into hominid evolution from the gorilla genome sequence. Nature (2012) 4.12
The genome of the ctenophore Mnemiopsis leidyi and its implications for cell type evolution. Science (2013) 4.07
The implications of alternative splicing in the ENCODE protein complement. Proc Natl Acad Sci U S A (2007) 3.93
Priorities for nucleotide trace, sequence and annotation data capture at the Ensembl Trace Archive and the EMBL Nucleotide Sequence Database. Nucleic Acids Res (2007) 3.84