Published in Proc Natl Acad Sci U S A on May 19, 2010
The cytochrome bd respiratory oxygen reductases. Biochim Biophys Acta (2011) 2.05
The Cytochrome bd Oxidase of Porphyromonas gingivalis Contributes to Oxidative Stress Resistance and Dioxygen Tolerance. PLoS One (2015) 1.39
The induction of two biosynthetic enzymes helps Escherichia coli sustain heme synthesis and activate catalase during hydrogen peroxide stress. Mol Microbiol (2015) 1.18
The chlorite dismutase (HemQ) from Staphylococcus aureus has a redox-sensitive heme and is associated with the small colony variant phenotype. J Biol Chem (2013) 1.00
Mutations in hemG mediate resistance to salicylidene acylhydrazides, demonstrating a novel link between protoporphyrinogen oxidase (HemG) and Chlamydia trachomatis infectivity. J Bacteriol (2013) 0.89
Molecular phylogeny and intricate evolutionary history of the three isofunctional enzymes involved in the oxidation of protoporphyrinogen IX. Genome Biol Evol (2014) 0.86
Discovery of a gene involved in a third bacterial protoporphyrinogen oxidase activity through comparative genomic analysis and functional complementation. Appl Environ Microbiol (2011) 0.85
HemQ: An iron-coproporphyrin oxidative decarboxylase for protoheme synthesis in Firmicutes and Actinobacteria. Arch Biochem Biophys (2015) 0.83
Optimization of the heme biosynthesis pathway for the production of 5-aminolevulinic acid in Escherichia coli. Sci Rep (2015) 0.81
Futile cycling increases sensitivity toward oxidative stress in Escherichia coli. Metab Eng (2015) 0.80
Effects of glucose availability on expression of the key genes involved in synthesis of milk fat, lactose and glucose metabolism in bovine mammary epithelial cells. PLoS One (2013) 0.79
Prokaryotic Heme Biosynthesis: Multiple Pathways to a Common Essential Product. Microbiol Mol Biol Rev (2017) 0.77
The HemQ coprohaem decarboxylase generates reactive oxygen species: implications for the evolution of classical haem biosynthesis. Biochem J (2016) 0.77
Proteomics analyses of Bacillus subtilis after treatment with plumbagin, a plant-derived naphthoquinone. OMICS (2015) 0.77
Phenotypic and Genotypic Characteristics of Small Colony Variants and Their Role in Chronic Infection. Microbiol Insights (2015) 0.77
Leishmania major possesses a unique HemG-type protoporphyrinogen IX oxidase. Biosci Rep (2014) 0.76
Redox-sensing regulator Rex regulates aerobic metabolism, morphological differentiation, and avermectin production in Streptomyces avermitilis. Sci Rep (2017) 0.75
Fluorophore Absorption Size Exclusion Chromatography (FA-SEC): An Alternative Method for High-Throughput Detergent Screening of Membrane Proteins. PLoS One (2016) 0.75
Strategies for manipulation of oxygen utilization by the electron transfer chain in microbes for metabolic engineering purposes. J Ind Microbiol Biotechnol (2016) 0.75
Energy conservation in chemotrophic anaerobic bacteria. Bacteriol Rev (1977) 30.41
Oxidative protein folding is driven by the electron transport system. Cell (1999) 3.09
Roles of thiol-redox pathways in bacteria. Annu Rev Microbiol (2001) 2.60
Insights into the respiratory electron transfer pathway from the structure of nitrate reductase A. Nat Struct Biol (2003) 2.31
Cytochrome c oxidase: exciting progress and remaining mysteries. J Bioenerg Biomembr (2008) 2.07
Structures of human dihydroorotate dehydrogenase in complex with antiproliferative agents. Structure (2000) 1.98
A whole genome view of prokaryotic haem biosynthesis. Microbiology (2002) 1.92
Crystal structure of protoporphyrinogen IX oxidase: a key enzyme in haem and chlorophyll biosynthesis. EMBO J (2004) 1.75
Clustering and dynamics of cytochrome bd-I complexes in the Escherichia coli plasma membrane in vivo. Mol Microbiol (2008) 1.56
Cytochrome bd terminal oxidase. Biochim Biophys Acta (1997) 1.55
The biochemistry of heme biosynthesis. Arch Biochem Biophys (2008) 1.53
Coupled proton and electron transfer reactions in cytochrome oxidase. Front Biosci (2004) 1.38
Transmembrane proton translocation by cytochrome c oxidase. Biochim Biophys Acta (2006) 1.36
Reconstitution of a protein disulfide catalytic system. J Biol Chem (1998) 1.29
Mapping of a new hem gene in Escherichia coli K12. J Gen Microbiol (1979) 1.23
E. coli dihydroorotate dehydrogenase reveals structural and functional distinctions between different classes of dihydroorotate dehydrogenases. Structure (2002) 1.22
Methionine-393 is an axial ligand of the heme b558 component of the cytochrome bd ubiquinol oxidase from Escherichia coli. Biochemistry (1995) 1.18
Purification of a cytochrome bd terminal oxidase encoded by the Escherichia coli app locus from a delta cyo delta cyd strain complemented by genes from Bacillus firmus OF4. J Bacteriol (1996) 1.10
Identification of heme and copper ligands in subunit I of the cytochrome bo complex in Escherichia coli. J Biol Chem (1992) 1.10
Nitrate, fumarate, and oxygen as electron acceptors for a late step in microbial heme synthesis. Biochim Biophys Acta (1976) 1.06
Identification of Escherichia coli HemG as a novel, menadione-dependent flavodoxin with protoporphyrinogen oxidase activity. Biochemistry (2009) 1.01
Structural and biochemical characterization of a quinol binding site of Escherichia coli nitrate reductase A. J Biol Chem (2004) 1.00
One-step purification of histidine-tagged cytochrome bo3 from Escherichia coli and demonstration that associated quinone is not required for the structural integrity of the oxidase. Biochim Biophys Acta (1997) 0.98
Complementary analysis of the vegetative membrane proteome of the human pathogen Staphylococcus aureus. Mol Cell Proteomics (2008) 0.98
Fumarate as alternate electron acceptor for the late steps of anaerobic heme synthesis in Escherichia coli. Biochem Biophys Res Commun (1975) 0.97
Differences in protonation of ubiquinone and menaquinone in fumarate reductase from Escherichia coli. J Biol Chem (2006) 0.97
Structural insight into unique properties of protoporphyrinogen oxidase from Bacillus subtilis. J Struct Biol (2009) 0.92
Quinones as hydrogen carriers for a late step in anaerobic heme biosynthesis in Escherichia coli. Biochim Biophys Acta (1978) 0.91
Reduction of porphyrins to porphyrinogens with palladium on carbon. Anal Biochem (2008) 0.90
Probing the ubiquinol-binding site in cytochrome bd by site-directed mutagenesis. Biochemistry (2006) 0.89
Overexpression, purification, and crystallization of the membrane-bound fumarate reductase from Escherichia coli. Protein Expr Purif (2000) 0.88
Defects in vesicle core induced by escherichia coli dihydroorotate dehydrogenase. Biophys J (2007) 0.87
Heme axial ligation by the highly conserved His residues in helix II of cytochrome b (NarI) of Escherichia coli nitrate reductase A. J Biol Chem (1997) 0.85
The Aerobic and Anaerobic Respiratory Chain of Escherichia coli and Salmonella enterica: Enzymes and Energetics. Ecosal Plus (2008) 0.83
Improved H+/O ratio and cell yield of Escherichia coli with genetically altered terminal quinol oxidases. J Biosci Bioeng (2002) 0.81
Functional definition of the tobacco protoporphyrinogen IX oxidase substrate-binding site. Biochem J (2007) 0.81
Human protoporphyrinogen oxidase: relation between the herbicide binding site and the flavin cofactor. Biochemistry (1998) 0.80
Condition-dependent transcriptome reveals high-level regulatory architecture in Bacillus subtilis. Science (2012) 4.41
Substrate-controlled succession of marine bacterioplankton populations induced by a phytoplankton bloom. Science (2012) 4.11
PrediSi: prediction of signal peptides and their cleavage positions. Nucleic Acids Res (2004) 3.93
Physiological proteomics of the uncultured endosymbiont of Riftia pachyptila. Science (2007) 3.03
Virtual Footprint and PRODORIC: an integrative framework for regulon prediction in prokaryotes. Bioinformatics (2005) 2.82
PRODORIC: prokaryotic database of gene regulation. Nucleic Acids Res (2003) 2.81
JCat: a novel tool to adapt codon usage of a target gene to its potential expression host. Nucleic Acids Res (2005) 2.60
RNA-dependent cysteine biosynthesis in archaea. Science (2005) 2.50
Global network reorganization during dynamic adaptations of Bacillus subtilis metabolism. Science (2012) 2.38
Rapamycin extends murine lifespan but has limited effects on aging. J Clin Invest (2013) 2.23
The complete genome sequence of the algal symbiont Dinoroseobacter shibae: a hitchhiker's guide to life in the sea. ISME J (2009) 2.00
Crystal structure of coproporphyrinogen III oxidase reveals cofactor geometry of Radical SAM enzymes. EMBO J (2003) 1.98
Nanoarchaeum equitans creates functional tRNAs from separate genes for their 5'- and 3'-halves. Nature (2005) 1.97
Genome sequences of the biotechnologically important Bacillus megaterium strains QM B1551 and DSM319. J Bacteriol (2011) 1.86
Bacillus megaterium--from simple soil bacterium to industrial protein production host. Appl Microbiol Biotechnol (2007) 1.85
A comprehensive proteome map of growing Bacillus subtilis cells. Proteomics (2004) 1.78
Crystal structure of 5-aminolevulinate synthase, the first enzyme of heme biosynthesis, and its link to XLSA in humans. EMBO J (2005) 1.74
Polysulfides link H2S to protein thiol oxidation. Antioxid Redox Signal (2013) 1.70
JProGO: a novel tool for the functional interpretation of prokaryotic microarray data using Gene Ontology information. Nucleic Acids Res (2006) 1.69
Long-term anaerobic survival of the opportunistic pathogen Pseudomonas aeruginosa via pyruvate fermentation. J Bacteriol (2004) 1.63
Characterization of acetyl-CoA/propionyl-CoA carboxylase in Metallosphaera sedula. Carboxylating enzyme in the 3-hydroxypropionate cycle for autotrophic carbon fixation. Eur J Biochem (2003) 1.57
SYSTOMONAS--an integrated database for systems biology analysis of Pseudomonas. Nucleic Acids Res (2007) 1.55
The biochemistry of heme biosynthesis. Arch Biochem Biophys (2008) 1.53
The influence of agr and sigmaB in growth phase dependent regulation of virulence factors in Staphylococcus aureus. Proteomics (2004) 1.51
Systems metabolic engineering of xylose-utilizing Corynebacterium glutamicum for production of 1,5-diaminopentane. Biotechnol J (2013) 1.50
Structure and function of enzymes in heme biosynthesis. Protein Sci (2010) 1.48
S-bacillithiolation protects against hypochlorite stress in Bacillus subtilis as revealed by transcriptomics and redox proteomics. Mol Cell Proteomics (2011) 1.48
PRODORIC (release 2009): a database and tool platform for the analysis of gene regulation in prokaryotes. Nucleic Acids Res (2008) 1.39
A comprehensive proteomics and transcriptomics analysis of Bacillus subtilis salt stress adaptation. J Bacteriol (2009) 1.35
S-cysteinylation is a general mechanism for thiol protection of Bacillus subtilis proteins after oxidative stress. J Biol Chem (2007) 1.33
JVirGel: Calculation of virtual two-dimensional protein gels. Nucleic Acids Res (2003) 1.33
The Fnr regulon of Bacillus subtilis. J Bacteriol (2006) 1.29
The anaerobic regulatory network required for Pseudomonas aeruginosa nitrate respiration. J Bacteriol (2007) 1.29
Anaerobic adaptation in Pseudomonas aeruginosa: definition of the Anr and Dnr regulons. Environ Microbiol (2010) 1.24
Adaptation of Pseudomonas aeruginosa to various conditions includes tRNA-dependent formation of alanyl-phosphatidylglycerol. Mol Microbiol (2008) 1.24
Anaerobic physiology of Pseudomonas aeruginosa in the cystic fibrosis lung. Int J Med Microbiol (2010) 1.23
Oxygen-independent coproporphyrinogen-III oxidase HemN from Escherichia coli. J Biol Chem (2002) 1.22
Small cationic antimicrobial peptides delocalize peripheral membrane proteins. Proc Natl Acad Sci U S A (2014) 1.22
Systems-wide temporal proteomic profiling in glucose-starved Bacillus subtilis. Nat Commun (2010) 1.19
Protein aggregation in Escherichia coli: role of proteases. FEMS Microbiol Lett (2002) 1.19
Benzoate-coenzyme A ligase from Thauera aromatica: an enzyme acting in anaerobic and aerobic pathways. J Bacteriol (2003) 1.19
ProdoNet: identification and visualization of prokaryotic gene regulatory and metabolic networks. Nucleic Acids Res (2008) 1.18
Dynamics of protein phosphorylation on Ser/Thr/Tyr in Bacillus subtilis. Proteomics (2007) 1.17
The genome of the obligate intracellular parasite Trachipleistophora hominis: new insights into microsporidian genome dynamics and reductive evolution. PLoS Pathog (2012) 1.16
A short story about a big magic bug. Bioeng Bugs (2010) 1.16
Structure and function of radical SAM enzymes. Curr Opin Chem Biol (2004) 1.16
Isotope ratios of H, C, and O in CO2 and H2O of the martian atmosphere. Science (2013) 1.15
Characterization of JG024, a pseudomonas aeruginosa PB1-like broad host range phage under simulated infection conditions. BMC Microbiol (2010) 1.15
Metaproteomics of a gutless marine worm and its symbiotic microbial community reveal unusual pathways for carbon and energy use. Proc Natl Acad Sci U S A (2012) 1.14
Proteome analyses of Staphylococcus aureus in growing and non-growing cells: a physiological approach. Int J Med Microbiol (2005) 1.14
Production and secretion of recombinant Leuconostoc mesenteroides dextransucrase DsrS in Bacillus megaterium. Biotechnol Bioeng (2005) 1.14
Identification and functional analysis of enzymes required for precorrin-2 dehydrogenation and metal ion insertion in the biosynthesis of sirohaem and cobalamin in Bacillus megaterium. Biochem J (2003) 1.13
Diamide triggers mainly S Thiolations in the cytoplasmic proteomes of Bacillus subtilis and Staphylococcus aureus. J Bacteriol (2009) 1.12
Involvement of protein acetylation in glucose-induced transcription of a stress-responsive promoter. Mol Microbiol (2011) 1.11
Distinct roles of phenol-soluble modulins in spreading of Staphylococcus aureus on wet surfaces. Appl Environ Microbiol (2012) 1.11
Crystal structure of the nitrogenase-like dark operative protochlorophyllide oxidoreductase catalytic complex (ChlN/ChlB)2. J Biol Chem (2010) 1.11
Characterization of a new type of phosphopantetheinyl transferase for fatty acid and siderophore synthesis in Pseudomonas aeruginosa. J Biol Chem (2002) 1.10
MetaQuant: a tool for the automatic quantification of GC/MS-based metabolome data. Bioinformatics (2006) 1.10
Elucidation of the anaerobic pathway for the corrin component of cobalamin (vitamin B12). Proc Natl Acad Sci U S A (2013) 1.10
The phosphoproteome of the minimal bacterium Mycoplasma pneumoniae: analysis of the complete known Ser/Thr kinome suggests the existence of novel kinases. Mol Cell Proteomics (2010) 1.09
Global impact of protein arginine phosphorylation on the physiology of Bacillus subtilis. Proc Natl Acad Sci U S A (2012) 1.09
Regulation of quinone detoxification by the thiol stress sensing DUF24/MarR-like repressor, YodB in Bacillus subtilis. Mol Microbiol (2008) 1.09
Genetic tools for the investigation of Roseobacter clade bacteria. BMC Microbiol (2009) 1.07
Profiling the surfacome of Staphylococcus aureus. Proteomics (2010) 1.07
Bacillus subtilis Fnr senses oxygen via a [4Fe-4S] cluster coordinated by three cysteine residues without change in the oligomeric state. Mol Microbiol (2006) 1.06
Towards the development of Bacillus subtilis as a cell factory for membrane proteins and protein complexes. Microb Cell Fact (2008) 1.05
Oxidative stress triggers thiol oxidation in the glyceraldehyde-3-phosphate dehydrogenase of Staphylococcus aureus. Mol Microbiol (2004) 1.04
Proteins unique to intraphagosomally grown Mycobacterium tuberculosis. Proteomics (2006) 1.04
Structural and functional comparison of HemN to other radical SAM enzymes. Biol Chem (2005) 1.04
Functional analysis of novel Rab GTPases identified in the proteome of purified Legionella-containing vacuoles from macrophages. Cell Microbiol (2014) 1.04
S-bacillithiolation protects conserved and essential proteins against hypochlorite stress in firmicutes bacteria. Antioxid Redox Signal (2012) 1.04
Comprehensive absolute quantification of the cytosolic proteome of Bacillus subtilis by data independent, parallel fragmentation in liquid chromatography/mass spectrometry (LC/MS(E)). Mol Cell Proteomics (2014) 1.03
Characterization of the cobaltochelatase CbiXL: evidence for a 4Fe-4S center housed within an MXCXXC motif. J Biol Chem (2003) 1.03
Plasmid system for the intracellular production and purification of affinity-tagged proteins in Bacillus megaterium. Biotechnol Bioeng (2007) 1.02
Radical S-adenosylmethionine enzyme coproporphyrinogen III oxidase HemN: functional features of the [4Fe-4S] cluster and the two bound S-adenosyl-L-methionines. J Biol Chem (2005) 1.02
A proteomic view of cell physiology and virulence of Staphylococcus aureus. Int J Med Microbiol (2009) 1.02
Inhibition of acetyl phosphate-dependent transcription by an acetylatable lysine on RNA polymerase. J Biol Chem (2012) 1.01
Efficient, global-scale quantification of absolute protein amounts by integration of targeted mass spectrometry and two-dimensional gel-based proteomics. Anal Chem (2011) 1.01
Penicillin-binding protein folding is dependent on the PrsA peptidyl-prolyl cis-trans isomerase in Bacillus subtilis. Mol Microbiol (2010) 1.01
Depletion of thiol-containing proteins in response to quinones in Bacillus subtilis. Mol Microbiol (2008) 1.01
TLM-Tracker: software for cell segmentation, tracking and lineage analysis in time-lapse microscopy movies. Bioinformatics (2012) 1.00
Members of the genus Arthrobacter grow anaerobically using nitrate ammonification and fermentative processes: anaerobic adaptation of aerobic bacteria abundant in soil. FEMS Microbiol Lett (2003) 1.00
Getting the big beast to work--systems biotechnology of Bacillus megaterium for novel high-value proteins. J Biotechnol (2012) 1.00
Acetylation of the response regulator RcsB controls transcription from a small RNA promoter. J Bacteriol (2013) 1.00
The substrate radical of Escherichia coli oxygen-independent coproporphyrinogen III oxidase HemN. J Biol Chem (2006) 1.00
High yield recombinant penicillin G amidase production and export into the growth medium using Bacillus megaterium. Microb Cell Fact (2006) 0.99
The ineluctable requirement for the trans-iron elements molybdenum and/or tungsten in the origin of life. Sci Rep (2012) 0.99