Published in RNA on January 18, 2013
Guest list or black list: heritable small RNAs as immunogenic memories. Trends Cell Biol (2013) 1.52
The soft genome. Worm (2015) 0.76
Origins and Mechanisms of miRNAs and siRNAs. Cell (2009) 20.77
Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila. Cell (2007) 18.35
Argonaute2, a link between genetic and biochemical analyses of RNAi. Science (2001) 15.32
A distinct small RNA pathway silences selfish genetic elements in the germline. Science (2006) 11.63
A slicer-mediated mechanism for repeat-associated siRNA 5' end formation in Drosophila. Science (2007) 10.73
A germline-specific class of small RNAs binds mammalian Piwi proteins. Nature (2006) 9.88
The Piwi-piRNA pathway provides an adaptive defense in the transposon arms race. Science (2007) 9.36
Small RNAs as guardians of the genome. Cell (2009) 8.88
A novel class of small RNAs bind to MILI protein in mouse testes. Nature (2006) 8.80
Developmentally regulated piRNA clusters implicate MILI in transposon control. Science (2007) 7.68
A novel class of evolutionarily conserved genes defined by piwi are essential for stem cell self-renewal. Genes Dev (1998) 6.74
A role for Piwi and piRNAs in germ cell maintenance and transposon silencing in Zebrafish. Cell (2007) 6.31
An epigenetic role for maternally inherited piRNAs in transposon silencing. Science (2008) 5.05
The molecular basis of I-R hybrid dysgenesis in Drosophila melanogaster: identification, cloning, and properties of the I factor. Cell (1984) 4.24
piRNAs can trigger a multigenerational epigenetic memory in the germline of C. elegans. Cell (2012) 3.49
piRNAs initiate an epigenetic memory of nonself RNA in the C. elegans germline. Cell (2012) 3.48
The Drosophila HP1 homolog Rhino is required for transposon silencing and piRNA production by dual-strand clusters. Cell (2009) 3.13
Transcriptional silencing of transposons by Piwi and maelstrom and its impact on chromatin state and gene expression. Cell (2012) 3.04
Evidence for a piwi-dependent RNA silencing of the gypsy endogenous retrovirus by the Drosophila melanogaster flamenco gene. Genetics (2004) 2.99
Gypsy transposition correlates with the production of a retroviral envelope-like protein under the tissue-specific control of the Drosophila flamenco gene. EMBO J (1994) 2.63
Genetic variation in the zebrafish. Genome Res (2006) 2.22
3' end formation of PIWI-interacting RNAs in vitro. Mol Cell (2011) 2.05
The structural biochemistry of Zucchini implicates it as a nuclease in piRNA biogenesis. Nature (2012) 1.97
Structure and function of Zucchini endoribonuclease in piRNA biogenesis. Nature (2012) 1.90
Zili is required for germ cell differentiation and meiosis in zebrafish. EMBO J (2008) 1.87
Human transposon tectonics. Cell (2012) 1.81
piRNA-mediated nuclear accumulation of retrotransposon transcripts in the Drosophila female germline. Proc Natl Acad Sci U S A (2008) 1.79
Adaptation to P element transposon invasion in Drosophila melanogaster. Cell (2011) 1.76
UAP56 couples piRNA clusters to the perinuclear transposon silencing machinery. Cell (2012) 1.53
Hen1 is required for oocyte development and piRNA stability in zebrafish. EMBO J (2010) 1.53
Extremely stable Piwi-induced gene silencing in Caenorhabditis elegans. EMBO J (2012) 1.41
Production of artificial piRNAs in flies and mice. RNA (2011) 1.37
The I--R system of hybrid dysgenesis in Drosophila melanogaster: are I factor insertions responsible for the mutator effect of the I--R interaction? Mol Gen Genet (1981) 1.34
Molecular lesions associated with white gene mutations induced by I-R hybrid dysgenesis in Drosophila melanogaster. EMBO J (1984) 1.14
Small RNA-based silencing strategies for transposons in the process of invading Drosophila species. RNA (2010) 1.13
Hybrid Dysgenesis in DROSOPHILA MELANOGASTER: Factors Affecting Chromosomal Contamination in the P-M System. Genetics (1983) 1.07
Crystal structure of the primary piRNA biogenesis factor Zucchini reveals similarity to the bacterial PLD endonuclease Nuc. RNA (2012) 1.00
Tdrd1 acts as a molecular scaffold for Piwi proteins and piRNA targets in zebrafish. EMBO J (2011) 0.95
A role for transcription from a piRNA cluster in de novo piRNA production. RNA (2011) 0.94
MicroRNA expression in zebrafish embryonic development. Science (2005) 15.52
Processing of primary microRNAs by the Microprocessor complex. Nature (2004) 14.59
Phylogenetic shadowing and computational identification of human microRNA genes. Cell (2005) 13.24
Identification of functional elements and regulatory circuits by Drosophila modENCODE. Science (2010) 12.39
A role for Piwi and piRNAs in germ cell maintenance and transposon silencing in Zebrafish. Cell (2007) 6.31
Concern Substrate requirements for let-7 function in the developing zebrafish embryo. Nucleic Acids Res (2004) 4.50
A micrococcal nuclease homologue in RNAi effector complexes. Nature (2003) 3.67
The TRIM-NHL protein TRIM32 activates microRNAs and prevents self-renewal in mouse neural progenitors. Cell (2009) 3.60
Piwi and piRNAs act upstream of an endogenous siRNA pathway to suppress Tc3 transposon mobility in the Caenorhabditis elegans germline. Mol Cell (2008) 3.37
The Argonaute CSR-1 and its 22G-RNA cofactors are required for holocentric chromosome segregation. Cell (2009) 3.14
Targeted inhibition of miRNA maturation with morpholinos reveals a role for miR-375 in pancreatic islet development. PLoS Biol (2007) 3.04
Evolutionary flux of canonical microRNAs and mirtrons in Drosophila. Nat Genet (2010) 2.84
Detection of microRNAs in frozen tissue sections by fluorescence in situ hybridization using locked nucleic acid probes and tyramide signal amplification. Nat Protoc (2007) 2.80
Abundant primary piRNAs, endo-siRNAs, and microRNAs in a Drosophila ovary cell line. Genome Res (2009) 2.68
Cloning and expression of new microRNAs from zebrafish. Nucleic Acids Res (2006) 2.58
Differences in vertebrate microRNA expression. Proc Natl Acad Sci U S A (2006) 2.45
Metabolic labeling of C. elegans and D. melanogaster for quantitative proteomics. Nat Biotechnol (2003) 2.37
Functionally distinct regulatory RNAs generated by bidirectional transcription and processing of microRNA loci. Genes Dev (2008) 2.35
Genetic variation in the zebrafish. Genome Res (2006) 2.22
Mouse microRNA profiles determined with a new and sensitive cloning method. Nucleic Acids Res (2006) 1.94
CDE-1 affects chromosome segregation through uridylation of CSR-1-bound siRNAs. Cell (2009) 1.94
PIWI-interacting RNAs: from generation to transgenerational epigenetics. Nat Rev Genet (2013) 1.92
RNA helicase MUT-14-dependent gene silencing triggered in C. elegans by short antisense RNAs. Science (2002) 1.91
Zili is required for germ cell differentiation and meiosis in zebrafish. EMBO J (2008) 1.87
Structural features of small RNA precursors determine Argonaute loading in Caenorhabditis elegans. Nat Struct Mol Biol (2007) 1.84
LPIN2 is associated with type 2 diabetes, glucose metabolism, and body composition. Diabetes (2007) 1.83
microRNAs associated with the different human Argonaute proteins. Nucleic Acids Res (2012) 1.66
Repertoire and evolution of miRNA genes in four divergent nematode species. Genome Res (2009) 1.64
Hen1 is required for oocyte development and piRNA stability in zebrafish. EMBO J (2010) 1.53
Single nucleotide polymorphisms associated with rat expressed sequences. Genome Res (2004) 1.43
Extremely stable Piwi-induced gene silencing in Caenorhabditis elegans. EMBO J (2012) 1.41
RDE-1 slicer activity is required only for passenger-strand cleavage during RNAi in Caenorhabditis elegans. Nat Struct Mol Biol (2009) 1.35
Small RNAs and the control of transposons and viruses in Drosophila. Trends Microbiol (2009) 1.27
Differential impact of the HEN1 homolog HENN-1 on 21U and 26G RNAs in the germline of Caenorhabditis elegans. PLoS Genet (2012) 1.20
The role of small non-coding RNAs in genome stability and chromatin organization. J Cell Sci (2010) 1.19
DNA methylation dynamics during intestinal stem cell differentiation reveals enhancers driving gene expression in the villus. Genome Biol (2013) 1.12
RDE-2 interacts with MUT-7 to mediate RNA interference in Caenorhabditis elegans. Nucleic Acids Res (2005) 1.10
Potential role of miR-29b in modulation of Dnmt3a and Dnmt3b expression in primordial germ cells of female mouse embryos. RNA (2009) 1.07
Expression patterns of intronic microRNAs in Caenorhabditis elegans. Silence (2010) 1.06
MicroRNA-directed siRNA biogenesis in Caenorhabditis elegans. PLoS Genet (2010) 1.05
A deep sequencing approach to uncover the miRNOME in the human heart. PLoS One (2013) 1.04
CASCAD: a database of annotated candidate single nucleotide polymorphisms associated with expressed sequences. BMC Genomics (2005) 1.03
Evidence for post-transcriptional regulation of clustered microRNAs in Drosophila. BMC Genomics (2011) 1.02
A position-dependent organisation of retinoid response elements is conserved in the vertebrate Hox clusters. Trends Genet (2003) 0.98
Neuronal activity regulates hippocampal miRNA expression. PLoS One (2011) 0.98
Tdrd1 acts as a molecular scaffold for Piwi proteins and piRNA targets in zebrafish. EMBO J (2011) 0.95
Generation and characterization of FMR1 knockout zebrafish. PLoS One (2009) 0.93
Profiling of RNA modifications by multiplexed stable isotope labelling. Chem Commun (Camb) (2014) 0.91
Sex allocation adjustment to mating group size in a simultaneous hermaphrodite. Evolution (2013) 0.89
Controlling miRNA regulation in disease. Methods Mol Biol (2012) 0.89
Isolation of RNA from C. elegans. CSH Protoc (2006) 0.88
Fine-tuning the brain: MicroRNAs. Front Neuroendocrinol (2009) 0.88
Mutations in LRRC50 predispose zebrafish and humans to seminomas. PLoS Genet (2013) 0.87
Boule-like genes regulate male and female gametogenesis in the flatworm Macrostomum lignano. Dev Biol (2011) 0.85
Functional microRNA screening using a comprehensive lentiviral human microRNA expression library. BMC Genomics (2011) 0.84
Biological adhesion of the flatworm Macrostomum lignano relies on a duo-gland system and is mediated by a cell type-specific intermediate filament protein. Front Zool (2014) 0.83
The Hippo pathway regulates stem cells during homeostasis and regeneration of the flatworm Macrostomum lignano. Stem Cells Dev (2013) 0.81
The Flatworm Macrostomum lignano Is a Powerful Model Organism for Ion Channel and Stem Cell Research. Stem Cells Int (2012) 0.81
Tracing the evolution of tissue identity with microRNAs. Genome Biol (2010) 0.81
The Evolution of SINEs and LINEs in the genus Chironomus (Diptera). J Mol Evol (2004) 0.81
Novel small RNA expression libraries uncover hsa-miR-30b and hsa-miR-30c as important factors in anoikis resistance. RNA (2013) 0.79
BURSTING POLLEN is required to organize the pollen germination plaque and pollen tube tip in Arabidopsis thaliana. New Phytol (2014) 0.78
Sample preparation for small RNA massive parallel sequencing. Methods Mol Biol (2012) 0.78
Mesodermal gene expression in the acoel Isodiametra pulchra indicates a low number of mesodermal cell types and the endomesodermal origin of the gonads. PLoS One (2013) 0.78
PID-1 is a novel factor that operates during 21U-RNA biogenesis in Caenorhabditis elegans. Genes Dev (2014) 0.78
Biolistic transformation of Caenorhabditis elegans. Methods Mol Biol (2013) 0.76
Cosuppression in C. elegans. CSH Protoc (2006) 0.76
RNAi genes pave their own way. Genes Dev (2011) 0.75
Dcr1 tracked down. Dev Cell (2010) 0.75
Introduction of Double-Stranded RNA in C. elegans by Injection. CSH Protoc (2006) 0.75
Expression pattern analysis of microRNAs in Caenorhabditis elegans. Methods Mol Biol (2013) 0.75
Detection of siRNA in C. elegans Using RNase Protection. CSH Protoc (2006) 0.75
Isolation of zebrafish gonads for RNA isolation. Methods Mol Biol (2014) 0.75
Detection of si/miRNA in C. elegans by Northern Blot. CSH Protoc (2006) 0.75
Introduction of Double-Stranded RNA in C. elegans by Soaking. CSH Protoc (2006) 0.75
Introduction of Double-Stranded RNA in C. elegans by Feeding. CSH Protoc (2006) 0.75