Published in Science on April 25, 2014
A Phylogenetic Analysis of 34 Chloroplast Genomes Elucidates the Relationships between Wild and Domestic Species within the Genus Citrus. Mol Biol Evol (2015) 1.79
Transcriptome-wide mapping reveals reversible and dynamic N(1)-methyladenosine methylome. Nat Chem Biol (2016) 1.68
Mitochondrial 16S rRNA Is Methylated by tRNA Methyltransferase TRMT61B in All Vertebrates. PLoS Biol (2016) 1.46
The reverse transcription signature of N-1-methyladenosine in RNA-Seq is sequence dependent. Nucleic Acids Res (2015) 1.12
Genetically encoded impairment of neuronal KCC2 cotransporter function in human idiopathic generalized epilepsy. EMBO Rep (2014) 1.08
The genomic landscape of polymorphic human nuclear mitochondrial insertions. Nucleic Acids Res (2014) 0.97
The recruitment of chromatin modifiers by long noncoding RNAs: lessons from PRC2. RNA (2015) 0.91
Chimeric mitochondrial peptides from contiguous regular and swinger RNA. Comput Struct Biotechnol J (2016) 0.79
Rampant nuclear insertion of mtDNA across diverse lineages within Orthoptera (Insecta). PLoS One (2014) 0.78
A haplotype-based normalization technique for the analysis and detection of allele specific expression. BMC Bioinformatics (2016) 0.77
Ancient Out-of-Africa Mitochondrial DNA Variants Associate with Distinct Mitochondrial Gene Expression Patterns. PLoS Genet (2016) 0.76
Streamlined analysis of duplex sequencing data with Du Novo. Genome Biol (2016) 0.75
Integrated genomic analysis of mitochondrial RNA processing in human cancers. Genome Med (2017) 0.75
Mitochondrial heteroplasmy in vertebrates using ChIP-sequencing data. Genome Biol (2016) 0.75
RNA: All sorts of mitochondrial RNA. Nat Rev Genet (2014) 0.75
Unbiased Mitoproteome Analyses Confirm Non-canonical RNA, Expanded Codon Translations. Comput Struct Biotechnol J (2016) 0.75
Allele-specific expression reveals interactions between genetic variation and environment. Nat Methods (2017) 0.75
Identification of transcriptional biomarkers by RNA-sequencing for improved detection of β2-agonists abuse in goat skeletal muscle. PLoS One (2017) 0.75
Variation in genome-wide mutation rates within and between human families. Nat Genet (2011) 8.84
A coalescent-based method for detecting and estimating recombination from gene sequences. Genetics (2002) 7.41
Genome-wide variation and identification of vaccine targets in the Plasmodium falciparum genome. Nat Genet (2006) 3.45
De novo mutations in the gene encoding the synaptic scaffolding protein SHANK3 in patients ascertained for schizophrenia. Proc Natl Acad Sci U S A (2010) 3.13
Recombination hotspots and population structure in Plasmodium falciparum. PLoS Biol (2005) 2.67
Plasmodium falciparum genome-wide scans for positive selection, recombination hot spots and resistance to antimalarial drugs. Nat Genet (2010) 2.48
Global genetic diversity and evolution of var genes associated with placental and severe childhood malaria. Mol Biochem Parasitol (2006) 2.24
Synthetic double-stranded RNA induces innate immune responses similar to a live viral vaccine in humans. J Exp Med (2011) 2.09
Mutations in centrosomal protein CEP152 in primary microcephaly families linked to MCPH4. Am J Hum Genet (2010) 2.05
Structural polymorphism and diversifying selection on the pregnancy malaria vaccine candidate VAR2CSA. Mol Biochem Parasitol (2007) 1.86
Single-cell gene-expression profiling reveals qualitatively distinct CD8 T cells elicited by different gene-based vaccines. Proc Natl Acad Sci U S A (2011) 1.56
Phenotypic variation and natural selection at catsup, a pleiotropic quantitative trait gene in Drosophila. Curr Biol (2006) 1.49
Exome sequencing identifies mutations in the gene TTC7A in French-Canadian cases with hereditary multiple intestinal atresia. J Med Genet (2013) 1.44
Functional divergence caused by ancient positive selection of a Drosophila hybrid incompatibility locus. PLoS Biol (2004) 1.41
Blood-informative transcripts define nine common axes of peripheral blood gene expression. PLoS Genet (2013) 1.36
Rare copy number variants contribute to congenital left-sided heart disease. PLoS Genet (2012) 1.35
Plasmodium falciparum genetic diversity maintained and amplified over 5 years of a low transmission endemic in the Peruvian Amazon. Mol Biol Evol (2010) 1.33
Retracted Darwinian selection on a selfing locus. Science (2004) 1.29
CD160 and PD-1 co-expression on HIV-specific CD8 T cells defines a subset with advanced dysfunction. PLoS Pathog (2012) 1.28
High recombination rates and hotspots in a Plasmodium falciparum genetic cross. Genome Biol (2011) 1.27
Low-complexity regions in Plasmodium falciparum: missing links in the evolution of an extreme genome. Mol Biol Evol (2010) 1.23
Improved innate and adaptive immunostimulation by genetically modified HIV-1 protein expressing NYVAC vectors. PLoS One (2011) 1.16
Diversity and linkage of genes in the self-incompatibility gene family in Arabidopsis lyrata. Genetics (2003) 1.14
A murine specific expansion of the Rhox cluster involved in embryonic stem cell biology is under natural selection. BMC Genomics (2006) 1.12
Evidence for additive and interaction effects of host genotype and infection in malaria. Proc Natl Acad Sci U S A (2012) 1.11
An X-linked haplotype of Neandertal origin is present among all non-African populations. Mol Biol Evol (2011) 1.11
Rare allelic forms of PRDM9 associated with childhood leukemogenesis. Genome Res (2012) 1.09
A population genetic approach to mapping neurological disorder genes using deep resequencing. PLoS Genet (2011) 1.07
Whole-exome sequencing reveals a rapid change in the frequency of rare functional variants in a founding population of humans. PLoS Genet (2013) 1.03
Profound metabolic, functional, and cytolytic differences characterize HIV-specific CD8 T cells in primary and chronic HIV infection. Blood (2012) 1.03
Cohort profile of the CARTaGENE study: Quebec's population-based biobank for public health and personalized genomics. Int J Epidemiol (2012) 1.00
Myeloid dendritic cells induce HIV-1 latency in non-proliferating CD4+ T cells. PLoS Pathog (2013) 0.97
Age-dependent recombination rates in human pedigrees. PLoS Genet (2011) 0.95
Low linkage disequilibrium indicative of recombination in foot-and-mouth disease virus gene sequence alignments. J Gen Virol (2004) 0.95
Association between response to albendazole treatment and β-tubulin genotype frequencies in soil-transmitted helminths. PLoS Negl Trop Dis (2013) 0.94
A family-based probabilistic method for capturing de novo mutations from high-throughput short-read sequencing data. Stat Appl Genet Mol Biol (2012) 0.92
Next-generation sequencing approaches for genetic mapping of complex diseases. J Neuroimmunol (2012) 0.91
Synergistic antileukemic action of a combination of inhibitors of DNA methylation and histone methylation. Leuk Res (2012) 0.91
Hypervariable antigen genes in malaria have ancient roots. BMC Evol Biol (2013) 0.90
Genetic adaptation of the antibacterial human innate immunity network. BMC Evol Biol (2011) 0.89
Selection shapes malaria genomes and drives divergence between pathogens infecting hominids versus rodents. BMC Evol Biol (2008) 0.86
Transcriptional profiling reveals molecular signatures associated with HIV permissiveness in Th1Th17 cells and identifies peroxisome proliferator-activated receptor gamma as an intrinsic negative regulator of viral replication. Retrovirology (2013) 0.85
Programming of marginal zone B-cell fate by basic Kruppel-like factor (BKLF/KLF3). Blood (2011) 0.84
Unique features of memory T cells in HIV elite controllers: a systems biology perspective. Curr Opin HIV AIDS (2011) 0.83
Selective constraint, background selection, and mutation accumulation variability within and between human populations. BMC Genomics (2013) 0.82
Association of age-dependent height and bone mineral density decline with increased arterial stiffness and rate of fractures in hypertensive individuals. J Hypertens (2015) 0.82
Harnessing genomics to identify environmental determinants of heritable disease. Mutat Res (2012) 0.81
Prevalence, awareness, and management of CKD and cardiovascular risk factors in publicly funded health care. Clin J Am Soc Nephrol (2014) 0.81
Similarity in recombination rate estimates highly correlates with genetic differentiation in humans. PLoS One (2011) 0.80
The effects of weak genetic perturbations on the transcriptome of the wing imaginal disc and its association with wing shape in Drosophila melanogaster. Genetics (2011) 0.79
Ethnic differences in the frequency of the cardioprotective C679X PCSK9 mutation in a West African population. Genet Test (2008) 0.77
Exploiting gene expression variation to capture gene-environment interactions for disease. Front Genet (2013) 0.77
Pharmacogenetic association study of 30 genes with phenobarbital drug response in epileptic dogs. Pharmacogenet Genomics (2009) 0.76