Model-driven experimental approach reveals the complex regulatory distribution of p53 by the circadian factor Period 2.

PubWeight™: 0.80‹?›

🔗 View Article (PMID 27834218)

Published in Proc Natl Acad Sci U S A on November 09, 2016

Authors

Tetsuya Gotoh1, Jae Kyoung Kim2, Jingjing Liu1, Marian Vila-Caballer1, Philip E Stauffer1, John J Tyson3, Carla V Finkielstein4

Author Affiliations

1: Integrated Cellular Responses Laboratory, Department of Biological Sciences, Biocomplexity Institute, Virginia Polytechnic Institute and State University, Blacksburg, VA 24061.
2: Department of Mathematical Sciences, Korea Advanced Institute of Science and Technology, Daejeon 34131, Korea; finkielc@vt.edu jaekkim@kaist.ac.kr.
3: Computational Cell Biology Laboratory, Department of Biological Sciences, Virginia Polytechnic Institute and State University, Blacksburg, VA 24061.
4: Integrated Cellular Responses Laboratory, Department of Biological Sciences, Biocomplexity Institute, Virginia Polytechnic Institute and State University, Blacksburg, VA 24061; finkielc@vt.edu jaekkim@kaist.ac.kr.

Articles cited by this

NIH Image to ImageJ: 25 years of image analysis. Nat Methods (2012) 84.41

Rapid detection of octamer binding proteins with 'mini-extracts', prepared from a small number of cells. Nucleic Acids Res (1989) 22.73

Modes of p53 regulation. Cell (2009) 9.31

The genetics of mammalian circadian order and disorder: implications for physiology and disease. Nat Rev Genet (2008) 7.65

Resetting of circadian time in peripheral tissues by glucocorticoid signaling. Science (2000) 6.55

The circadian gene Period2 plays an important role in tumor suppression and DNA damage response in vivo. Cell (2002) 6.05

Quantification of protein half-lives in the budding yeast proteome. Proc Natl Acad Sci U S A (2006) 5.62

Mono- versus polyubiquitination: differential control of p53 fate by Mdm2. Science (2003) 5.23

Central and peripheral circadian clocks in mammals. Annu Rev Neurosci (2012) 4.73

RNA-binding protein HuR enhances p53 translation in response to ultraviolet light irradiation. Proc Natl Acad Sci U S A (2003) 4.34

Circadian mutant Overtime reveals F-box protein FBXL3 regulation of cryptochrome and period gene expression. Cell (2007) 3.99

JTK_CYCLE: an efficient nonparametric algorithm for detecting rhythmic components in genome-scale data sets. J Biol Rhythms (2010) 3.42

p53 dynamics control cell fate. Science (2012) 3.30

Recurrent initiation: a mechanism for triggering p53 pulses in response to DNA damage. Mol Cell (2008) 2.70

A noncanonical E-box enhancer drives mouse Period2 circadian oscillations in vivo. Proc Natl Acad Sci U S A (2005) 2.67

Basal dynamics of p53 reveal transcriptionally attenuated pulses in cycling cells. Cell (2010) 2.40

The importance of p53 location: nuclear or cytoplasmic zip code? Drug Resist Updat (2003) 1.61

Parameter estimation using Simulated Annealing for S-system models of biochemical networks. Bioinformatics (2006) 1.58

Deficiency in PER proteins has no effect on the rate of spontaneous and radiation-induced carcinogenesis. Cell Cycle (2013) 1.49

Functioning and robustness of a bacterial circadian clock. Mol Syst Biol (2007) 1.46

Selective inhibition of casein kinase 1 epsilon minimally alters circadian clock period. J Pharmacol Exp Ther (2009) 1.46

A mechanism for robust circadian timekeeping via stoichiometric balance. Mol Syst Biol (2012) 1.43

Circadian rhythms and cancer. Cell Cycle (2010) 1.31

Circadian timekeeping and output mechanisms in animals. Curr Opin Neurobiol (2013) 1.30

The tumor suppressor p53 is subject to both nuclear import and export, and both are fast, energy-dependent and lectin-inhibited. Oncogene (1997) 1.27

Inhibition of tumorigenesis by intratumoral delivery of the circadian gene mPer2 in C57BL/6 mice. Cancer Gene Ther (2007) 1.16

Robust synchronization of coupled circadian and cell cycle oscillators in single mammalian cells. Mol Syst Biol (2014) 1.14

Stress-mediated nuclear stabilization of p53 is regulated by ubiquitination and importin-alpha3 binding. Cell Death Differ (2009) 1.12

Phase locking and multiple oscillating attractors for the coupled mammalian clock and cell cycle. Proc Natl Acad Sci U S A (2014) 1.11

Role of phosphorylation in the mammalian circadian clock. Cold Spring Harb Symp Quant Biol (2007) 1.08

Global parameter search reveals design principles of the mammalian circadian clock. BMC Syst Biol (2008) 1.08

The multiple facets of Per2. Cold Spring Harb Symp Quant Biol (2007) 1.07

Nucleocytoplasmic shuttling of clock proteins. Methods Enzymol (2005) 1.05

Rhythmic degradation explains and unifies circadian transcriptome and proteome data. Cell Rep (2014) 0.94

Circadian rhythm and its role in malignancy. J Circadian Rhythms (2010) 0.94

Per2 inhibits k562 leukemia cell growth in vitro and in vivo through cell cycle arrest and apoptosis induction. Pathol Oncol Res (2009) 0.92

Mechanisms that enhance sustainability of p53 pulses. PLoS One (2013) 0.91

Beta-catenin induces beta-TrCP-mediated PER2 degradation altering circadian clock gene expression in intestinal mucosa of ApcMin/+ mice. J Biochem (2008) 0.90

The circadian factor Period 2 modulates p53 stability and transcriptional activity in unstressed cells. Mol Biol Cell (2014) 0.87

Circadian clock, cancer, and chemotherapy. Biochemistry (2014) 0.85

Association of the circadian factor Period 2 to p53 influences p53's function in DNA-damage signaling. Mol Biol Cell (2014) 0.84

Protein sequestration versus Hill-type repression in circadian clock models. IET Syst Biol (2016) 0.79