Nucleotide sequence of the iap gene, responsible for alkaline phosphatase isozyme conversion in Escherichia coli, and identification of the gene product.

PubWeight™: 5.28‹?› | Rank: Top 1%

🔗 View Article (PMC 213968)

Published in J Bacteriol on December 01, 1987

Authors

Y Ishino1, H Shinagawa, K Makino, M Amemura, A Nakata

Author Affiliations

1: Department of Experimental Chemotherapy, Osaka University, Japan.

Articles citing this

(truncated to the top 100)

Linkage map of Escherichia coli K-12, edition 8. Microbiol Rev (1990) 18.60

RNA-guided genetic silencing systems in bacteria and archaea. Nature (2012) 17.12

CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats. Nucleic Acids Res (2007) 15.56

Functions of the gene products of Escherichia coli. Microbiol Rev (1993) 15.51

The CRISPR/Cas bacterial immune system cleaves bacteriophage and plasmid DNA. Nature (2010) 14.21

Development and applications of CRISPR-Cas9 for genome engineering. Cell (2014) 13.50

A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/Cas subtypes exist in prokaryotic genomes. PLoS Comput Biol (2005) 11.82

Genome engineering of Drosophila with the CRISPR RNA-guided Cas9 nuclease. Genetics (2013) 8.56

CRISPR interference: RNA-directed adaptive immunity in bacteria and archaea. Nat Rev Genet (2010) 7.47

Bacteriophage resistance mechanisms. Nat Rev Microbiol (2010) 7.38

Mapping sequenced E.coli genes by computer: software, strategies and examples. Nucleic Acids Res (1991) 6.29

A putative viral defence mechanism in archaeal cells. Archaea (2006) 4.84

Highly efficient targeted mutagenesis of Drosophila with the CRISPR/Cas9 system. Cell Rep (2013) 4.72

The CRISPR system: small RNA-guided defense in bacteria and archaea. Mol Cell (2010) 4.60

Complete genome sequence of the probiotic lactic acid bacterium Lactobacillus acidophilus NCFM. Proc Natl Acad Sci U S A (2005) 4.46

Linkage map of Escherichia coli K-12, edition 10: the traditional map. Microbiol Mol Biol Rev (1998) 4.18

A novel family of sequence-specific endoribonucleases associated with the clustered regularly interspaced short palindromic repeats. J Biol Chem (2008) 3.00

CRISPR, the disruptor. Nature (2015) 2.94

CRISPR-Cas systems: Prokaryotes upgrade to adaptive immunity. Mol Cell (2014) 2.87

The phage-host arms race: shaping the evolution of microbes. Bioessays (2011) 2.27

In vitro reconstitution of Cascade-mediated CRISPR immunity in Streptococcus thermophilus. EMBO J (2013) 2.16

Unusual nucleotide arrangement with repeated sequences in the Escherichia coli K-12 chromosome. J Bacteriol (1989) 2.06

Germ warfare in a microbial mat community: CRISPRs provide insights into the co-evolution of host and viral genomes. PLoS One (2009) 2.02

The small, slow and specialized CRISPR and anti-CRISPR of Escherichia and Salmonella. PLoS One (2010) 1.84

CRISPR-Cas immunity in prokaryotes. Nature (2015) 1.75

CRISPR distribution within the Escherichia coli species is not suggestive of immunity-associated diversifying selection. J Bacteriol (2011) 1.54

Phylogenetics and differentiation of Salmonella Newport lineages by whole genome sequencing. PLoS One (2013) 1.52

RNA in defense: CRISPRs protect prokaryotes against mobile genetic elements. Cold Spring Harb Perspect Biol (2012) 1.47

CRISPR-spacer integration reporter plasmids reveal distinct genuine acquisition specificities among CRISPR-Cas I-E variants of Escherichia coli. RNA Biol (2013) 1.45

A CRISPR view of development. Genes Dev (2014) 1.41

Bacteriophages of lactic acid bacteria and their impact on milk fermentations. Microb Cell Fact (2011) 1.31

Adapting to new threats: the generation of memory by CRISPR-Cas immune systems. Mol Microbiol (2014) 1.29

Biotechnology: Rewriting a genome. Nature (2013) 1.27

Function and regulation of clustered regularly interspaced short palindromic repeats (CRISPR) / CRISPR associated (Cas) systems. Viruses (2012) 1.27

Impact of small repeat sequences on bacterial genome evolution. Genome Biol Evol (2011) 1.18

Transcription activation mediated by a cyclic AMP receptor protein from Thermus thermophilus HB8. J Bacteriol (2007) 1.17

CRISPR-mediated phage resistance and the ghost of coevolution past. Proc Biol Sci (2010) 1.14

The role of CRISPR-Cas systems in virulence of pathogenic bacteria. Microbiol Mol Biol Rev (2014) 1.12

Surveillance and Processing of Foreign DNA by the Escherichia coli CRISPR-Cas System. Cell (2015) 1.09

Mutagenesis and homologous recombination in Drosophila cell lines using CRISPR/Cas9. Biol Open (2014) 1.08

Efficient inversions and duplications of mammalian regulatory DNA elements and gene clusters by CRISPR/Cas9. J Mol Cell Biol (2015) 1.07

A phoA structural gene mutation that conditionally affects formation of the enzyme bacterial alkaline phosphatase. J Bacteriol (1990) 1.06

Diversity, evolution, and functionality of clustered regularly interspaced short palindromic repeat (CRISPR) regions in the fire blight pathogen Erwinia amylovora. Appl Environ Microbiol (2011) 1.06

Identification of a regulated alkaline phosphatase, a cell surface-associated lipoprotein, in Mycobacterium smegmatis. J Bacteriol (2003) 1.06

CRISPR-Cas adaptation: insights into the mechanism of action. Nat Rev Microbiol (2016) 1.05

Tripeptidase gene (pepT) of Lactococcus lactis: molecular cloning and nucleotide sequencing of pepT and construction of a chromosomal deletion mutant. J Bacteriol (1994) 0.99

Small RNAs for defence and regulation in archaea. Extremophiles (2012) 0.99

Spatial structure and Lamarckian adaptation explain extreme genetic diversity at CRISPR locus. MBio (2012) 0.99

Targeted bacterial immunity buffers phage diversity. J Virol (2011) 0.98

The evolutionary divergence of Shiga toxin-producing Escherichia coli is reflected in clustered regularly interspaced short palindromic repeat (CRISPR) spacer composition. Appl Environ Microbiol (2013) 0.98

Maximizing the return on taxpayers' investments in fundamental biomedical research. Mol Biol Cell (2015) 0.97

Association of clustered regularly interspaced short palindromic repeat (CRISPR) elements with specific serotypes and virulence potential of shiga toxin-producing Escherichia coli. Appl Environ Microbiol (2013) 0.95

Cloning and nucleotide sequence of the anaerobically regulated pepT gene of Salmonella typhimurium. J Bacteriol (1991) 0.95

Revolutionizing plant biology: multiple ways of genome engineering by CRISPR/Cas. Plant Methods (2016) 0.94

Within-genome evolution of REPINs: a new family of miniature mobile DNA in bacteria. PLoS Genet (2011) 0.94

Developing insights into the mechanisms of evolution of bacterial pathogens from whole-genome sequences. Future Microbiol (2012) 0.93

CRISPRs: molecular signatures used for pathogen subtyping. Appl Environ Microbiol (2013) 0.93

CRISPR-Cas: biology, mechanisms and relevance. Philos Trans R Soc Lond B Biol Sci (2016) 0.93

Epigenome engineering in cancer: fairytale or a realistic path to the clinic? Front Oncol (2015) 0.92

Heritable CRISPR/Cas9-mediated genome editing in the yellow fever mosquito, Aedes aegypti. PLoS One (2015) 0.91

CRISPR-Cas systems: new players in gene regulation and bacterial physiology. Front Cell Infect Microbiol (2014) 0.89

TALEN and CRISPR/Cas Genome Editing Systems: Tools of Discovery. Acta Naturae (2014) 0.89

Genome editing revolutionize the creation of genetically modified pigs for modeling human diseases. Hum Genet (2016) 0.88

Genome-editing technologies and their potential application in horticultural crop breeding. Hortic Res (2015) 0.86

Molecular cloning, sequencing, and mapping of the gene encoding protease I and characterization of proteinase and proteinase-defective Escherichia coli mutants. J Bacteriol (1993) 0.86

Methodological and Clinical Aspects of the Molecular Epidemiology of Mycobacterium tuberculosis and Other Mycobacteria. Clin Microbiol Rev (2016) 0.84

CrisprGE: a central hub of CRISPR/Cas-based genome editing. Database (Oxford) (2015) 0.84

CRISPR-Cas9-mediated genome editing and guide RNA design. Mamm Genome (2015) 0.84

Genome Editing by CRISPR/Cas9: A Game Change in the Genetic Manipulation of Protists. J Eukaryot Microbiol (2016) 0.84

Current and future prospects for CRISPR-based tools in bacteria. Biotechnol Bioeng (2015) 0.83

Precision genetic modifications: a new era in molecular biology and crop improvement. Planta (2014) 0.83

Physical model of the immune response of bacteria against bacteriophage through the adaptive CRISPR-Cas immune system. Phys Biol (2013) 0.82

Evolution of animal Piwi-interacting RNAs and prokaryotic CRISPRs. Brief Funct Genomics (2012) 0.82

Application of CRISPR/Cas9 for biomedical discoveries. Cell Biosci (2015) 0.82

CRISPR-Cas9: Tool for Qualitative and Quantitative Plant Genome Editing. Front Plant Sci (2016) 0.82

The potential of the combination of CRISPR/Cas9 and pluripotent stem cells to provide human organs from chimaeric pigs. Int J Mol Sci (2015) 0.82

Applications of Engineered DNA-Binding Molecules Such as TAL Proteins and the CRISPR/Cas System in Biology Research. Int J Mol Sci (2015) 0.81

A CRISPR Path to Engineering New Genetic Mouse Models for Cardiovascular Research. Arterioscler Thromb Vasc Biol (2016) 0.81

An Overview of CRISPR-Based Tools and Their Improvements: New Opportunities in Understanding Plant-Pathogen Interactions for Better Crop Protection. Front Plant Sci (2016) 0.80

A novel virulence strategy for Pseudomonas aeruginosa mediated by an autotransporter with arginine-specific aminopeptidase activity. PLoS Pathog (2012) 0.80

Specific targeting of the metallophosphoesterase YkuE to the bacillus cell wall requires the twin-arginine translocation system. J Biol Chem (2012) 0.80

Recent advances in innovative therapeutic approaches for Duchenne muscular dystrophy: from discovery to clinical trials. Am J Transl Res (2016) 0.80

Small regulatory RNAs in Archaea. RNA Biol (2014) 0.80

Crystal structures of CRISPR-associated Csx3 reveal a manganese-dependent deadenylation exoribonuclease. RNA Biol (2015) 0.80

CRISPR-based screening of genomic island excision events in bacteria. Proc Natl Acad Sci U S A (2015) 0.80

Small molecules targeting microRNA for cancer therapy: Promises and obstacles. J Control Release (2015) 0.80

Neurogenethics: An emerging discipline at the intersection of ethics, neuroscience, and genomics. Appl Transl Genom (2015) 0.79

Harnessing the Prokaryotic Adaptive Immune System as a Eukaryotic Antiviral Defense. Trends Microbiol (2016) 0.79

Analysis of the type II-A CRISPR-Cas system of Streptococcus agalactiae reveals distinctive features according to genetic lineages. Front Genet (2015) 0.79

Combining CRISPR/Cas9 and rAAV Templates for Efficient Gene Editing. Nucleic Acid Ther (2015) 0.79

Induced Pluripotency and Gene Editing in Disease Modelling: Perspectives and Challenges. Int J Mol Sci (2015) 0.79

CRISPR/Cas9: Implications for Modeling and Therapy of Neurodegenerative Diseases. Front Mol Neurosci (2016) 0.79

Physiological and biochemical analysis of the effects of alkaline phosphatase overproduction in Escherichia coli. J Bacteriol (1995) 0.78

Strategies for gene disruption in Drosophila. Cell Biosci (2014) 0.78

Phages Fight Back: Inactivation of the CRISPR-Cas Bacterial Immune System by Anti-CRISPR Proteins. PLoS Pathog (2016) 0.78

Targeted Genome Editing via CRISPR in the Pathogen Cryptococcus neoformans. PLoS One (2016) 0.78

Diversity of CRISPR-Cas immune systems and molecular machines. Genome Biol (2015) 0.78

Genetically engineered mouse models in oncology research and cancer medicine. EMBO Mol Med (2016) 0.77

A decade of discovery: CRISPR functions and applications. Nat Microbiol (2017) 0.77

Functional Analysis of Porphyromonas gingivalis W83 CRISPR-Cas Systems. J Bacteriol (2015) 0.76

Articles cited by this

DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci U S A (1977) 790.54

A rapid alkaline extraction procedure for screening recombinant plasmid DNA. Nucleic Acids Res (1979) 214.95

The 3'-terminal sequence of Escherichia coli 16S ribosomal RNA: complementarity to nonsense triplets and ribosome binding sites. Proc Natl Acad Sci U S A (1974) 62.91

Cloning in single-stranded bacteriophage as an aid to rapid DNA sequencing. J Mol Biol (1980) 61.16

Regulatory sequences involved in the promotion and termination of RNA transcription. Annu Rev Genet (1979) 54.83

A system for shotgun DNA sequencing. Nucleic Acids Res (1981) 52.99

Compilation and analysis of Escherichia coli promoter DNA sequences. Nucleic Acids Res (1983) 38.72

Comparison of initiation of protein synthesis in procaryotes, eucaryotes, and organelles. Microbiol Rev (1983) 24.58

Translational initiation in prokaryotes. Annu Rev Microbiol (1981) 18.46

Identification of the uvrA gene product. J Mol Biol (1981) 8.35

Protein secretion in Escherichia coli. Annu Rev Microbiol (1985) 6.74

Repetitive extragenic palindromic sequences: a major component of the bacterial genome. Cell (1984) 6.45

Nucleotide sequence of the phoB gene, the positive regulatory gene for the phosphate regulon of Escherichia coli K-12. J Mol Biol (1986) 4.47

Stabilization of translationally active mRNA by prokaryotic REP sequences. Cell (1987) 4.08

A systemic DNA sequencing strategy. J Mol Biol (1982) 3.93

Nucleotide sequence of the genes involved in phosphate transport and regulation of the phosphate regulon in Escherichia coli. J Mol Biol (1985) 2.49

Multiple molecular forms of the alkaline phosphatase of Escherichia coli. Ann N Y Acad Sci (1968) 1.51

Amino acid sequence of Escherichia coli alkaline phosphatase. Amino- and carboxyl-terminal sequences and variations between two isozymes. Biochemistry (1973) 1.51

Escherichia coli mutants deficient in the production of alkaline phosphatase isozymes. J Bacteriol (1978) 1.50

Hyperproduction of phosphate-binding protein, phoS, and pre-phoS proteins in Escherichia coli carrying a cloned phoS gene. Eur J Biochem (1983) 1.25

Ribosomal alterations controlling alkaline phosphatase isozymes in Escherichia coli. J Bacteriol (1972) 1.15

Cloning of alkaline phosphatase isozyme gene (iap) of Escherichia coli. Gene (1982) 1.10

Alkaline phosphatase isozyme conversion by cell-free extract of Escherichia coli. FEBS Lett (1984) 0.99

Inhibition of alkaline phosphatase isozyme conversion by protease inhibitors in Escherichia coli K-12. FEBS Lett (1979) 0.95

Articles by these authors

Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12. DNA Res (2001) 15.22

Nuclear localization of EGF receptor and its potential new role as a transcription factor. Nat Cell Biol (2001) 7.22

Nucleotide sequence of the phoB gene, the positive regulatory gene for the phosphate regulon of Escherichia coli K-12. J Mol Biol (1986) 4.47

RecA protein-dependent cleavage of UmuD protein and SOS mutagenesis. Proc Natl Acad Sci U S A (1988) 4.12

Signal transduction in the phosphate regulon of Escherichia coli involves phosphotransfer between PhoR and PhoB proteins. J Mol Biol (1989) 3.56

Regulation of the phosphate regulon of Escherichia coli. Activation of pstS transcription by PhoB protein in vitro. J Mol Biol (1988) 3.14

A filamentous phage associated with recent pandemic Vibrio parahaemolyticus O3:K6 strains. J Clin Microbiol (2000) 2.87

Escherichia coli RuvC protein is an endonuclease that resolves the Holliday structure. EMBO J (1991) 2.76

Systematic sequencing of the Escherichia coli genome: analysis of the 0-2.4 min region. Nucleic Acids Res (1992) 2.75

Nucleotide sequence of the phoR gene, a regulatory gene for the phosphate regulon of Escherichia coli. J Mol Biol (1986) 2.65

Atomic structure of the RuvC resolvase: a holliday junction-specific endonuclease from E. coli. Cell (1994) 2.55

Nucleotide sequence of the phoM region of Escherichia coli: four open reading frames may constitute an operon. J Bacteriol (1986) 2.55

The rpoE gene of Escherichia coli, which encodes sigma E, is essential for bacterial growth at high temperature. J Bacteriol (1995) 2.50

Nucleotide sequence of the genes involved in phosphate transport and regulation of the phosphate regulon in Escherichia coli. J Mol Biol (1985) 2.49

Complete nucleotide sequences of 93-kb and 3.3-kb plasmids of an enterohemorrhagic Escherichia coli O157:H7 derived from Sakai outbreak. DNA Res (1998) 2.43

Evaluation and characterization of catabolite-responsive elements (cre) of Bacillus subtilis. Nucleic Acids Res (2000) 2.35

Characterization of the roles of the Saccharomyces cerevisiae RAD54 gene and a homologue of RAD54, RDH54/TID1, in mitosis and meiosis. Genetics (1997) 2.31

Structural analysis of the umu operon required for inducible mutagenesis in Escherichia coli. Proc Natl Acad Sci U S A (1985) 2.30

HER-2/neu promotes androgen-independent survival and growth of prostate cancer cells through the Akt pathway. Cancer Res (2000) 2.25

Diffusion-weighted imaging of metastatic brain tumors: comparison with histologic type and tumor cellularity. AJNR Am J Neuroradiol (2006) 2.17

Regulation of the pho regulon in Escherichia coli K-12. Genetic and physiological regulation of the positive regulatory gene phoB. J Mol Biol (1983) 2.15

Functional map of the alpha subunit of Escherichia coli RNA polymerase: two modes of transcription activation by positive factors. Proc Natl Acad Sci U S A (1991) 2.14

Role of the sigma 70 subunit of RNA polymerase in transcriptional activation by activator protein PhoB in Escherichia coli. Genes Dev (1993) 2.07

Unusual nucleotide arrangement with repeated sequences in the Escherichia coli K-12 chromosome. J Bacteriol (1989) 2.06

toxB gene on pO157 of enterohemorrhagic Escherichia coli O157:H7 is required for full epithelial cell adherence phenotype. Infect Immun (2001) 2.04

INE: a rice genome database with an integrated map view. Nucleic Acids Res (2000) 2.00

Escherichia coli RuvA and RuvB proteins specifically interact with Holliday junctions and promote branch migration. Genes Dev (1992) 2.00

DNA binding of PhoB and its interaction with RNA polymerase. J Mol Biol (1996) 1.97

Cloning and characterization of the umu operon responsible for inducible mutagenesis in Escherichia coli. Gene (1983) 1.96

Cloning of and complementation tests with alkaline phosphatase regulatory genes (phoS and phoT) of Escherichia coli. J Bacteriol (1982) 1.95

The Mcs4 response regulator coordinately controls the stress-activated Wak1-Wis1-Sty1 MAP kinase pathway and fission yeast cell cycle. Genes Dev (1997) 1.93

Urinary protein as measured with a pyrogallol red-molybdate complex, manually and in a Hitachi 726 automated analyzer. Clin Chem (1986) 1.92

Structure and regulation of the Escherichia coli ruv operon involved in DNA repair and recombination. J Bacteriol (1988) 1.92

Peroxide sensors for the fission yeast stress-activated mitogen-activated protein kinase pathway. Mol Biol Cell (2001) 1.80

Reduced uptake of oxidized low density lipoproteins in monocyte-derived macrophages from CD36-deficient subjects. J Clin Invest (1995) 1.77

Evaluation of the new system (umu-test) for the detection of environmental mutagens and carcinogens. Mutat Res (1985) 1.76

Complete nucleotide sequence of the prophage VT2-Sakai carrying the verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7 derived from the Sakai outbreak. Genes Genet Syst (1999) 1.70

The Skn7 response regulator of Saccharomyces cerevisiae interacts with Hsf1 in vivo and is required for the induction of heat shock genes by oxidative stress. Mol Biol Cell (2000) 1.69

Overproduction, purification, and ATPase activity of the Escherichia coli RuvB protein involved in DNA repair. J Bacteriol (1989) 1.69

Archaeal adaptation to higher temperatures revealed by genomic sequence of Thermoplasma volcanium. Proc Natl Acad Sci U S A (2000) 1.67

Location and orientation of the phoA locus on the Escherichia coli K-12 linkage map. J Bacteriol (1971) 1.65

SOS-inducible DNA repair proteins, RuvA and RuvB, of Escherichia coli: functional interactions between RuvA and RuvB for ATP hydrolysis and renaturation of the cruciform structure in supercoiled DNA. Proc Natl Acad Sci U S A (1991) 1.61

Cross talk to the phosphate regulon of Escherichia coli by PhoM protein: PhoM is a histidine protein kinase and catalyzes phosphorylation of PhoB and PhoM-open reading frame 2. J Bacteriol (1990) 1.60

Molecular analysis of the cryptic and functional phn operons for phosphonate use in Escherichia coli K-12. J Bacteriol (1991) 1.58

The Escherichia coli polB gene, which encodes DNA polymerase II, is regulated by the SOS system. J Bacteriol (1990) 1.56

Plasmid control of 6-aminohexanoic acid cyclic dimer degradation enzymes of Flavobacterium sp. KI72. J Bacteriol (1980) 1.55

Molecular cloning and nucleotide sequencing of oxyR, the positive regulatory gene of a regulon for an adaptive response to oxidative stress in Escherichia coli: homologies between OxyR protein and a family of bacterial activator proteins. Mol Gen Genet (1989) 1.54

Role of the sigma 70 subunit of Escherichia coli RNA polymerase in transcription activation. J Mol Biol (1994) 1.54

Synthesis and damage specificity of a novel probe for the detection of abasic sites in DNA. Biochemistry (1993) 1.52

Crystal structure of the holliday junction DNA in complex with a single RuvA tetramer. Proc Natl Acad Sci U S A (2000) 1.51

Escherichia coli mutants deficient in the production of alkaline phosphatase isozymes. J Bacteriol (1978) 1.50