The small RNA chaperone Hfq and multiple small RNAs control quorum sensing in Vibrio harveyi and Vibrio cholerae.

PubWeight™: 8.89‹?› | Rank: Top 0.1%

🔗 View Article (PMID 15242645)

Published in Cell on July 09, 2004

Authors

Derrick H Lenz1, Kenny C Mok, Brendan N Lilley, Rahul V Kulkarni, Ned S Wingreen, Bonnie L Bassler

Author Affiliations

1: Department of Molecular Biology, Princeton University, Princeton, NJ 08544, USA.

Articles citing this

(truncated to the top 100)

Regulatory RNAs in bacteria. Cell (2009) 9.57

The primary transcriptome of the major human pathogen Helicobacter pylori. Nature (2010) 7.70

Bacterial quorum-sensing network architectures. Annu Rev Genet (2009) 6.14

Hfq and its constellation of RNA. Nat Rev Microbiol (2011) 4.94

Look who's talking: communication and quorum sensing in the bacterial world. Philos Trans R Soc Lond B Biol Sci (2007) 4.24

Bacterial small RNA regulators: versatile roles and rapidly evolving variations. Cold Spring Harb Perspect Biol (2011) 3.75

RNase E-based ribonucleoprotein complexes: mechanical basis of mRNA destabilization mediated by bacterial noncoding RNAs. Genes Dev (2005) 3.66

Bacterial quorum sensing: its role in virulence and possibilities for its control. Cold Spring Harb Perspect Med (2012) 3.65

Quantitative characteristics of gene regulation by small RNA. PLoS Biol (2007) 3.35

Multiple sensors control reciprocal expression of Pseudomonas aeruginosa regulatory RNA and virulence genes. Proc Natl Acad Sci U S A (2005) 3.31

Three parallel quorum-sensing systems regulate gene expression in Vibrio harveyi. J Bacteriol (2004) 3.30

SigmaE-dependent small RNAs of Salmonella respond to membrane stress by accelerating global omp mRNA decay. Mol Microbiol (2006) 3.07

Translational control and target recognition by Escherichia coli small RNAs in vivo. Nucleic Acids Res (2007) 3.06

Cis-interactions between Notch and Delta generate mutually exclusive signalling states. Nature (2010) 3.06

Structure of Escherichia coli Hfq bound to polyriboadenylate RNA. Proc Natl Acad Sci U S A (2009) 3.04

Staphylococcus aureus RNAIII and the endoribonuclease III coordinately regulate spa gene expression. EMBO J (2005) 2.95

Identification of new noncoding RNAs in Listeria monocytogenes and prediction of mRNA targets. Nucleic Acids Res (2007) 2.75

A Vibrio cholerae autoinducer-receptor pair that controls biofilm formation. Nat Chem Biol (2017) 2.72

Metatranscriptomics reveals unique microbial small RNAs in the ocean's water column. Nature (2009) 2.72

Regulation of uptake and processing of the quorum-sensing autoinducer AI-2 in Escherichia coli. J Bacteriol (2005) 2.64

Two seemingly homologous noncoding RNAs act hierarchically to activate glmS mRNA translation. PLoS Biol (2008) 2.61

Small RNA genes expressed from Staphylococcus aureus genomic and pathogenicity islands with specific expression among pathogenic strains. Proc Natl Acad Sci U S A (2005) 2.55

Characterization of the Staphylococcus aureus heat shock, cold shock, stringent, and SOS responses and their effects on log-phase mRNA turnover. J Bacteriol (2006) 2.50

Ligand-induced asymmetry in histidine sensor kinase complex regulates quorum sensing. Cell (2006) 2.48

Quorum sensing controls biofilm formation in Vibrio cholerae through modulation of cyclic di-GMP levels and repression of vpsT. J Bacteriol (2008) 2.45

The genome of Aeromonas salmonicida subsp. salmonicida A449: insights into the evolution of a fish pathogen. BMC Genomics (2008) 2.40

Quantifying the integration of quorum-sensing signals with single-cell resolution. PLoS Biol (2009) 2.40

Multiple small RNAs act additively to integrate sensory information and control quorum sensing in Vibrio harveyi. Genes Dev (2007) 2.33

A quantitative comparison of sRNA-based and protein-based gene regulation. Mol Syst Biol (2008) 2.33

Messing with bacterial quorum sensing. Microbiol Mol Biol Rev (2006) 2.31

A qrr noncoding RNA deploys four different regulatory mechanisms to optimize quorum-sensing dynamics. Cell (2015) 2.31

Small RNA regulators and the bacterial response to stress. Cold Spring Harb Symp Quant Biol (2006) 2.31

Regulatory networks controlling Vibrio cholerae virulence gene expression. Infect Immun (2007) 2.28

Experimental discovery of sRNAs in Vibrio cholerae by direct cloning, 5S/tRNA depletion and parallel sequencing. Nucleic Acids Res (2009) 2.25

Regulation of phenotypic variability by a threshold-based mechanism underlies bacterial persistence. Proc Natl Acad Sci U S A (2010) 2.20

Interference with AI-2-mediated bacterial cell-cell communication. Nature (2005) 2.17

The Vibrio harveyi quorum-sensing system uses shared regulatory components to discriminate between multiple autoinducers. Genes Dev (2006) 2.17

Regulatory small RNAs circumvent the conventional quorum sensing pathway in pandemic Vibrio cholerae. Proc Natl Acad Sci U S A (2007) 2.13

Small RNA-induced mRNA degradation achieved through both translation block and activated cleavage. Genes Dev (2011) 2.12

Identification of 17 Pseudomonas aeruginosa sRNAs and prediction of sRNA-encoding genes in 10 diverse pathogens using the bioinformatic tool sRNAPredict2. Nucleic Acids Res (2006) 2.11

The Vibrio harveyi master quorum-sensing regulator, LuxR, a TetR-type protein is both an activator and a repressor: DNA recognition and binding specificity at target promoters. Mol Microbiol (2008) 2.11

Deducing receptor signaling parameters from in vivo analysis: LuxN/AI-1 quorum sensing in Vibrio harveyi. Cell (2008) 2.10

Protein sequestration generates a flexible ultrasensitive response in a genetic network. Mol Syst Biol (2009) 2.09

RNA-Seq-based monitoring of infection-linked changes in Vibrio cholerae gene expression. Cell Host Microbe (2011) 2.05

Small RNAs encoded within genetic islands of Salmonella typhimurium show host-induced expression and role in virulence. Nucleic Acids Res (2008) 2.04

Identification of small Hfq-binding RNAs in Listeria monocytogenes. RNA (2006) 2.00

RpoS controls the Vibrio cholerae mucosal escape response. PLoS Pathog (2006) 1.87

Is autoinducer-2 a universal signal for interspecies communication: a comparative genomic and phylogenetic analysis of the synthesis and signal transduction pathways. BMC Evol Biol (2004) 1.86

Regulation of rugosity and biofilm formation in Vibrio cholerae: comparison of VpsT and VpsR regulons and epistasis analysis of vpsT, vpsR, and hapR. J Bacteriol (2006) 1.85

A new Vibrio cholerae sRNA modulates colonization and affects release of outer membrane vesicles. Mol Microbiol (2008) 1.83

Identification of cyanobacterial non-coding RNAs by comparative genome analysis. Genome Biol (2005) 1.82

Genetic and phenotypic diversity of quorum-sensing systems in clinical and environmental isolates of Vibrio cholerae. Infect Immun (2006) 1.82

High-throughput, kingdom-wide prediction and annotation of bacterial non-coding RNAs. PLoS One (2008) 1.80

AphA and LuxR/HapR reciprocally control quorum sensing in vibrios. Genes Dev (2011) 1.79

AI-3 synthesis is not dependent on luxS in Escherichia coli. J Bacteriol (2006) 1.76

Quorum sensing and social networking in the microbial world. J R Soc Interface (2009) 1.76

A negative feedback loop involving small RNAs accelerates Vibrio cholerae's transition out of quorum-sensing mode. Genes Dev (2008) 1.74

The challenge of regulation in a minimal photoautotroph: non-coding RNAs in Prochlorococcus. PLoS Genet (2008) 1.74

Three small RNAs jointly ensure secondary metabolism and biocontrol in Pseudomonas fluorescens CHA0. Proc Natl Acad Sci U S A (2005) 1.69

High-resolution transcriptional analysis of the regulatory influence of cell-to-cell signalling reveals novel genes that contribute to Xanthomonas phytopathogenesis. Mol Microbiol (2013) 1.68

The 5' end of two redundant sRNAs is involved in the regulation of multiple targets, including their own regulator. Nucleic Acids Res (2008) 1.63

RNAs: regulators of bacterial virulence. Nat Rev Microbiol (2010) 1.63

Mucosal penetration primes Vibrio cholerae for host colonization by repressing quorum sensing. Proc Natl Acad Sci U S A (2008) 1.63

Characterization of the small untranslated RNA RyhB and its regulon in Vibrio cholerae. J Bacteriol (2005) 1.60

Characterization of Vibrio cholerae RyhB: the RyhB regulon and role of ryhB in biofilm formation. Infect Immun (2005) 1.57

The C-terminal domain of Escherichia coli Hfq is required for regulation. Nucleic Acids Res (2007) 1.55

A quorum-sensing antagonist targets both membrane-bound and cytoplasmic receptors and controls bacterial pathogenicity. Mol Cell (2009) 1.55

A small RNA that regulates motility and biofilm formation in response to changes in nutrient availability in Escherichia coli. Mol Microbiol (2012) 1.53

sRNAPredict: an integrative computational approach to identify sRNAs in bacterial genomes. Nucleic Acids Res (2005) 1.52

Role of luxS in Bacillus anthracis growth and virulence factor expression. Virulence (2010) 1.52

Negative feedback loops involving small regulatory RNAs precisely control the Vibrio harveyi quorum-sensing response. Mol Cell (2010) 1.52

Experimental discovery of small RNAs in Staphylococcus aureus reveals a riboregulator of central metabolism. Nucleic Acids Res (2010) 1.49

The intracellular sRNA transcriptome of Listeria monocytogenes during growth in macrophages. Nucleic Acids Res (2011) 1.47

A small-RNA-mediated negative feedback loop controls quorum-sensing dynamics in Vibrio harveyi. Mol Microbiol (2008) 1.47

Quorum sensing in Escherichia coli is signaled by AI-2/LsrR: effects on small RNA and biofilm architecture. J Bacteriol (2007) 1.47

The extracellular nuclease Dns and its role in natural transformation of Vibrio cholerae. J Bacteriol (2008) 1.45

Quorum sensing and a global regulator TsrA control expression of type VI secretion and virulence in Vibrio cholerae. Proc Natl Acad Sci U S A (2010) 1.44

Small RNAs establish gene expression thresholds. Curr Opin Microbiol (2008) 1.44

Temperature regulation of virulence factors in the pathogen Vibrio coralliilyticus. ISME J (2011) 1.43

Bacterial cell-to-cell signaling in the gastrointestinal tract. Infect Immun (2005) 1.43

Genes for small, noncoding RNAs under sporulation control in Bacillus subtilis. J Bacteriol (2006) 1.41

Self-engineering capabilities of bacteria. J R Soc Interface (2006) 1.40

Comparative genomics-based investigation of resequencing targets in Vibrio fischeri: focus on point miscalls and artefactual expansions. BMC Genomics (2008) 1.39

Global discovery of small RNAs in Yersinia pseudotuberculosis identifies Yersinia-specific small, noncoding RNAs required for virulence. Proc Natl Acad Sci U S A (2011) 1.38

A novel fur- and iron-regulated small RNA, NrrF, is required for indirect fur-mediated regulation of the sdhA and sdhC genes in Neisseria meningitidis. J Bacteriol (2007) 1.37

Involvement of the post-transcriptional regulator Hfq in Yersinia pestis virulence. PLoS One (2009) 1.37

Quorum sensing regulation of the two hcp alleles in Vibrio cholerae O1 strains. PLoS One (2009) 1.37

Gene dosage compensation calibrates four regulatory RNAs to control Vibrio cholerae quorum sensing. EMBO J (2009) 1.37

Comparative genomic analyses identify the Vibrio harveyi genome sequenced strains BAA-1116 and HY01 as Vibrio campbellii. Environ Microbiol Rep (2010) 1.37

The group A Streptococcus small regulatory RNA FasX enhances streptokinase activity by increasing the stability of the ska mRNA transcript. Mol Microbiol (2010) 1.37

Indole acts as an extracellular cue regulating gene expression in Vibrio cholerae. J Bacteriol (2009) 1.36

Hfq, a novel pleiotropic regulator of virulence-associated genes in Francisella tularensis. Infect Immun (2009) 1.36

Identification of differentially expressed small non-coding RNAs in the legume endosymbiont Sinorhizobium meliloti by comparative genomics. Mol Microbiol (2007) 1.35

Distinct sensory pathways in Vibrio cholerae El Tor and classical biotypes modulate cyclic dimeric GMP levels to control biofilm formation. J Bacteriol (2008) 1.33

Crystal structure of the Vibrio cholerae quorum-sensing regulatory protein HapR. J Bacteriol (2007) 1.32

Quorum-sensing non-coding small RNAs use unique pairing regions to differentially control mRNA targets. Mol Microbiol (2012) 1.32

Identification of a sigma B-dependent small noncoding RNA in Listeria monocytogenes. J Bacteriol (2008) 1.32

Small non-coding RNAs in Streptomyces coelicolor. Nucleic Acids Res (2008) 1.31

Regulatory targets of quorum sensing in Vibrio cholerae: evidence for two distinct HapR-binding motifs. Nucleic Acids Res (2009) 1.28

Shedding light on bioluminescence regulation in Vibrio fischeri. Mol Microbiol (2012) 1.28

Articles by these authors

Quorum sensing: cell-to-cell communication in bacteria. Annu Rev Cell Dev Biol (2005) 13.88

Structural identification of a bacterial quorum-sensing signal containing boron. Nature (2002) 8.11

Bacterial quorum-sensing network architectures. Annu Rev Genet (2009) 6.14

Quorum-sensing regulators control virulence gene expression in Vibrio cholerae. Proc Natl Acad Sci U S A (2002) 6.10

Quorum sensing controls biofilm formation in Vibrio cholerae. Mol Microbiol (2003) 5.46

Bacterial small-molecule signaling pathways. Science (2006) 5.14

Parallel quorum sensing systems converge to regulate virulence in Vibrio cholerae. Cell (2002) 5.12

LuxS quorum sensing: more than just a numbers game. Curr Opin Microbiol (2003) 3.76

Bacterial quorum sensing: its role in virulence and possibilities for its control. Cold Spring Harb Perspect Med (2012) 3.65

The major Vibrio cholerae autoinducer and its role in virulence factor production. Nature (2007) 3.57

LKB1 and SAD kinases define a pathway required for the polarization of cortical neurons. Cell (2007) 3.49

Salmonella typhimurium recognizes a chemically distinct form of the bacterial quorum-sensing signal AI-2. Mol Cell (2004) 3.36

Three parallel quorum-sensing systems regulate gene expression in Vibrio harveyi. J Bacteriol (2004) 3.30

Chemosensing in Escherichia coli: two regimes of two-state receptors. Proc Natl Acad Sci U S A (2006) 3.12

Self-organization of the Escherichia coli chemotaxis network imaged with super-resolution light microscopy. PLoS Biol (2009) 3.07

Regulation of uptake and processing of the quorum-sensing autoinducer AI-2 in Escherichia coli. J Bacteriol (2005) 2.64

The bacterial actin MreB rotates, and rotation depends on cell-wall assembly. Proc Natl Acad Sci U S A (2011) 2.61

CsrA and three redundant small RNAs regulate quorum sensing in Vibrio cholerae. Mol Microbiol (2005) 2.56

Quorum sensing regulates type III secretion in Vibrio harveyi and Vibrio parahaemolyticus. J Bacteriol (2004) 2.55

Interspecies communication in bacteria. J Clin Invest (2003) 2.55

Ligand-induced asymmetry in histidine sensor kinase complex regulates quorum sensing. Cell (2006) 2.48

Lsr-mediated transport and processing of AI-2 in Salmonella typhimurium. Mol Microbiol (2003) 2.47

A quorum-sensing inhibitor blocks Pseudomonas aeruginosa virulence and biofilm formation. Proc Natl Acad Sci U S A (2013) 2.46

Quorum sensing controls biofilm formation in Vibrio cholerae through modulation of cyclic di-GMP levels and repression of vpsT. J Bacteriol (2008) 2.45

Autoinducer 2: a concentration-dependent signal for mutualistic bacterial biofilm growth. Mol Microbiol (2006) 2.43

Quantifying the integration of quorum-sensing signals with single-cell resolution. PLoS Biol (2009) 2.40

Multiple small RNAs act additively to integrate sensory information and control quorum sensing in Vibrio harveyi. Genes Dev (2007) 2.33

A quantitative comparison of sRNA-based and protein-based gene regulation. Mol Syst Biol (2008) 2.33

In vivo residue-specific histone methylation dynamics. J Biol Chem (2009) 2.33

Phosphorylation and processing of the quorum-sensing molecule autoinducer-2 in enteric bacteria. ACS Chem Biol (2007) 2.20

An open letter to Elias Zerhouni. Science (2005) 2.19

Dynamic structures in Escherichia coli: spontaneous formation of MinE rings and MinD polar zones. Proc Natl Acad Sci U S A (2003) 2.19

Interference with AI-2-mediated bacterial cell-cell communication. Nature (2005) 2.17

Bacterial social engagements. Trends Cell Biol (2004) 2.17

The Vibrio harveyi quorum-sensing system uses shared regulatory components to discriminate between multiple autoinducers. Genes Dev (2006) 2.17

SEL1L, the homologue of yeast Hrd3p, is involved in protein dislocation from the mammalian ER. J Cell Biol (2006) 2.13

Precise adaptation in bacterial chemotaxis through "assistance neighborhoods". Proc Natl Acad Sci U S A (2006) 2.13

Regulatory small RNAs circumvent the conventional quorum sensing pathway in pandemic Vibrio cholerae. Proc Natl Acad Sci U S A (2007) 2.13

Cell shape and cell-wall organization in Gram-negative bacteria. Proc Natl Acad Sci U S A (2008) 2.13

The Vibrio harveyi master quorum-sensing regulator, LuxR, a TetR-type protein is both an activator and a repressor: DNA recognition and binding specificity at target promoters. Mol Microbiol (2008) 2.11

Deducing receptor signaling parameters from in vivo analysis: LuxN/AI-1 quorum sensing in Vibrio harveyi. Cell (2008) 2.10

Responding to chemical gradients: bacterial chemotaxis. Curr Opin Cell Biol (2011) 2.00

Vibrio harveyi quorum sensing: a coincidence detector for two autoinducers controls gene expression. EMBO J (2003) 1.99

Chemical communication among bacteria. Proc Natl Acad Sci U S A (2003) 1.98

A curvature-mediated mechanism for localization of lipids to bacterial poles. PLoS Comput Biol (2006) 1.95

Regulation of LuxPQ receptor activity by the quorum-sensing signal autoinducer-2. Mol Cell (2005) 1.94

Mechanisms for maintaining cell shape in rod-shaped Gram-negative bacteria. Mol Microbiol (2011) 1.91

PSICIC: noise and asymmetry in bacterial division revealed by computational image analysis at sub-pixel resolution. PLoS Comput Biol (2008) 1.88

Accuracy of direct gradient sensing by single cells. Proc Natl Acad Sci U S A (2008) 1.81

AphA and LuxR/HapR reciprocally control quorum sensing in vibrios. Genes Dev (2011) 1.79

A negative feedback loop involving small RNAs accelerates Vibrio cholerae's transition out of quorum-sensing mode. Genes Dev (2008) 1.74

Signal peptide peptidase is required for dislocation from the endoplasmic reticulum. Nature (2006) 1.73

Biofilm streamers cause catastrophic disruption of flow with consequences for environmental and medical systems. Proc Natl Acad Sci U S A (2013) 1.71

Kinetic analysis of the assembly of the outer membrane protein LamB in Escherichia coli mutants each lacking a secretion or targeting factor in a different cellular compartment. J Bacteriol (2006) 1.66

A fitness trade-off between local competition and dispersal in Vibrio cholerae biofilms. Proc Natl Acad Sci U S A (2011) 1.59

Metabolomics-driven quantitative analysis of ammonia assimilation in E. coli. Mol Syst Biol (2009) 1.57

Chemotaxis in Escherichia coli: a molecular model for robust precise adaptation. PLoS Comput Biol (2007) 1.56

A quorum-sensing antagonist targets both membrane-bound and cytoplasmic receptors and controls bacterial pathogenicity. Mol Cell (2009) 1.55

Negative feedback loops involving small regulatory RNAs precisely control the Vibrio harveyi quorum-sensing response. Mol Cell (2010) 1.52

A strategy for antagonizing quorum sensing. Mol Cell (2011) 1.47

A small-RNA-mediated negative feedback loop controls quorum-sensing dynamics in Vibrio harveyi. Mol Microbiol (2008) 1.47

An expeditious synthesis of DPD and boron binding studies. Org Lett (2005) 1.45

Receptor-receptor coupling in bacterial chemotaxis: evidence for strongly coupled clusters. Biophys J (2006) 1.43

Hourglass model for a protein-based circadian oscillator. Phys Rev Lett (2006) 1.43

α-Ketoglutarate coordinates carbon and nitrogen utilization via enzyme I inhibition. Nat Chem Biol (2011) 1.41

Mob psychology. J Bacteriol (2002) 1.40

Information processing and signal integration in bacterial quorum sensing. Mol Syst Biol (2009) 1.39

Gene dosage compensation calibrates four regulatory RNAs to control Vibrio cholerae quorum sensing. EMBO J (2009) 1.37

Distinct sensory pathways in Vibrio cholerae El Tor and classical biotypes modulate cyclic dimeric GMP levels to control biofilm formation. J Bacteriol (2008) 1.33

Cellular internalization of cytolethal distending toxin: a new end to a known pathway. Cell Microbiol (2005) 1.32

Differences in signalling by directly and indirectly binding ligands in bacterial chemotaxis. EMBO J (2010) 1.32

Quorum-sensing non-coding small RNAs use unique pairing regions to differentially control mRNA targets. Mol Microbiol (2012) 1.32

Differential neutralization efficiency of hemagglutinin epitopes, antibody interference, and the design of influenza vaccines. Proc Natl Acad Sci U S A (2009) 1.31

Signal production and detection specificity in Vibrio CqsA/CqsS quorum-sensing systems. Mol Microbiol (2011) 1.31

Variable sizes of Escherichia coli chemoreceptor signaling teams. Mol Syst Biol (2008) 1.29

Regulatory targets of quorum sensing in Vibrio cholerae: evidence for two distinct HapR-binding motifs. Nucleic Acids Res (2009) 1.28

The Vibrio cholerae quorum-sensing autoinducer CAI-1: analysis of the biosynthetic enzyme CqsA. Nat Chem Biol (2009) 1.26

The quorum-sensing molecule autoinducer 2 regulates motility and flagellar morphogenesis in Helicobacter pylori. J Bacteriol (2007) 1.26

Lipid localization in bacterial cells through curvature-mediated microphase separation. Biophys J (2008) 1.25

Thermal robustness of signaling in bacterial chemotaxis. Cell (2011) 1.23

Prediction of CsrA-regulating small RNAs in bacteria and their experimental verification in Vibrio fischeri. Nucleic Acids Res (2006) 1.23

Toward an atomistic model for predicting transcription-factor binding sites. Proteins (2004) 1.22

Cutting through the complexity of cell collectives. Proc Biol Sci (2013) 1.20

Active regulation of receptor ratios controls integration of quorum-sensing signals in Vibrio harveyi. Mol Syst Biol (2011) 1.19

Mechanism of Vibrio cholerae autoinducer-1 biosynthesis. ACS Chem Biol (2011) 1.19

Human cytomegalovirus protein US11 provokes an unfolded protein response that may facilitate the degradation of class I major histocompatibility complex products. J Virol (2005) 1.19

Maximum likelihood and the single receptor. Phys Rev Lett (2009) 1.18

Individual and combined roles of the master regulators AphA and LuxR in control of the Vibrio harveyi quorum-sensing regulon. J Bacteriol (2012) 1.15

Quorum sensing in Chromobacterium violaceum: DNA recognition and gene regulation by the CviR receptor. J Bacteriol (2011) 1.13

Probing bacterial transmembrane histidine kinase receptor-ligand interactions with natural and synthetic molecules. Proc Natl Acad Sci U S A (2010) 1.12

The small nucleoid protein Fis is involved in Vibrio cholerae quorum sensing. Mol Microbiol (2006) 1.12