Published in J Bacteriol on November 02, 2007
The universally conserved prokaryotic GTPases. Microbiol Mol Biol Rev (2011) 1.47
Role of the sigmaD-dependent autolysins in Bacillus subtilis population heterogeneity. J Bacteriol (2009) 1.35
Deconstructing ribosome construction. Trends Biochem Sci (2009) 1.31
RsgA releases RbfA from 30S ribosome during a late stage of ribosome biosynthesis. EMBO J (2010) 0.98
YsxC, an essential protein in Staphylococcus aureus crucial for ribosome assembly/stability. BMC Microbiol (2009) 0.91
An ancient P-loop GTPase in rice is regulated by a higher plant-specific regulatory protein. J Biol Chem (2010) 0.87
Nuclear/nucleolar GTPase 2 proteins as a subfamily of YlqF/YawG GTPases function in pre-60S ribosomal subunit maturation of mono- and dicotyledonous plants. J Biol Chem (2011) 0.87
Streptococcus pyogenes polymyxin B-resistant mutants display enhanced ExPortal integrity. J Bacteriol (2014) 0.85
Potassium acts as a GTPase-activating element on each nucleotide-binding domain of the essential Bacillus subtilis EngA. PLoS One (2012) 0.83
Phosphorylation of CpgA protein enhances both its GTPase activity and its affinity for ribosome and is crucial for Bacillus subtilis growth and morphology. J Biol Chem (2012) 0.82
Molecular dynamics simulation of the Staphylococcus aureus YsxC protein: molecular insights into ribosome assembly and allosteric inhibition of the protein. J Mol Model (2011) 0.78
Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature (1970) 1528.65
The complete atomic structure of the large ribosomal subunit at 2.4 A resolution. Science (2000) 28.25
Crystal structure of the ribosome at 5.5 A resolution. Science (2001) 18.21
Structure of the 70S ribosome complexed with mRNA and tRNA. Science (2006) 12.25
The GTPase superfamily: a conserved switch for diverse cell functions. Nature (1990) 11.71
The guanine nucleotide-binding switch in three dimensions. Science (2001) 9.34
High resolution structure of the large ribosomal subunit from a mesophilic eubacterium. Cell (2001) 6.97
Partial resolution of the enzymes catalyzing oxidative phosphorylation. I. Purification and properties of soluble dinitrophenol-stimulated adenosine triphosphatase. J Biol Chem (1960) 6.96
Classification and evolution of P-loop GTPases and related ATPases. J Mol Biol (2002) 6.85
G protein mechanisms: insights from structural analysis. Annu Rev Biochem (1997) 6.41
Crystal structure of a 70S ribosome-tRNA complex reveals functional interactions and rearrangements. Cell (2006) 4.90
Interaction of elongation factors EF-G and EF-Tu with a conserved loop in 23S RNA. Nature (1988) 4.53
'Conserved hypothetical' proteins: prioritization of targets for experimental study. Nucleic Acids Res (2004) 3.50
Single-stranded plasmid DNA in Bacillus subtilis and Staphylococcus aureus. Proc Natl Acad Sci U S A (1986) 3.31
Characterization of heat shock in Bacillus subtilis. J Bacteriol (1986) 3.30
Identifying protein function--a call for community action. PLoS Biol (2004) 2.99
Structural basis for the function of the ribosomal L7/12 stalk in factor binding and GTPase activation. Cell (2005) 2.97
A genome-based approach for the identification of essential bacterial genes. Nat Biotechnol (1998) 2.91
Structural basis for mRNA and tRNA positioning on the ribosome. Proc Natl Acad Sci U S A (2006) 2.55
lon gene product of Escherichia coli is a heat-shock protein. J Bacteriol (1984) 2.51
The structure of Ras protein: a model for a universal molecular switch. Trends Biochem Sci (1991) 2.02
A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. Mol Cell Proteomics (2006) 2.01
Evolution of a molecular switch: universal bacterial GTPases regulate ribosome function. Mol Microbiol (2001) 1.93
Ribosome synthesis meets the cell cycle. Curr Opin Microbiol (2004) 1.92
Nuclear export of ribosomal subunits. Trends Biochem Sci (2002) 1.88
Escherichia coli 70 S ribosome at 15 A resolution by cryo-electron microscopy: localization of fMet-tRNAfMet and fitting of L1 protein. J Mol Biol (1998) 1.84
Nucleolin interacts with several ribosomal proteins through its RGG domain. J Biol Chem (1998) 1.77
Six GTP-binding proteins of the Era/Obg family are essential for cell growth in Bacillus subtilis. Microbiology (2002) 1.76
The GTP binding protein Obg homolog ObgE is involved in ribosome maturation. Genes Cells (2005) 1.72
The ribosomal protein L8 is a complex L7/L12 and L10. FEBS Lett (1976) 1.68
Cloning, nucleotide sequence, and expression of the Bacillus subtilis lon gene. J Bacteriol (1994) 1.67
Studies of the interaction of Escherichia coli YjeQ with the ribosome in vitro. J Bacteriol (2004) 1.66
Relics from the RNA world. J Mol Evol (1998) 1.57
Function of the universally conserved bacterial GTPases. Curr Opin Microbiol (2003) 1.54
Era, an essential Escherichia coli small G-protein, binds to the 30S ribosomal subunit. Biochem Biophys Res Commun (1999) 1.52
The Escherichia coli GTPase CgtAE cofractionates with the 50S ribosomal subunit and interacts with SpoT, a ppGpp synthetase/hydrolase. J Bacteriol (2004) 1.48
The essential GTPase RbgA (YlqF) is required for 50S ribosome assembly in Bacillus subtilis. Mol Microbiol (2006) 1.47
Multiple GTPases participate in the assembly of the large ribosomal subunit in Bacillus subtilis. J Bacteriol (2006) 1.41
Structure of the L1 protuberance in the ribosome. Nat Struct Biol (2003) 1.39
A model for the spatial arrangement of the proteins in the large subunit of the Escherichia coli ribosome. EMBO J (1988) 1.38
Conserved P-loop GTPases of unknown function in bacteria: an emerging and vital ensemble in bacterial physiology. Biochem Cell Biol (2005) 1.36
Characterization of the Bacillus subtilis GTPase YloQ and its role in ribosome function. Biochem J (2005) 1.33
The GTP-binding protein YlqF participates in the late step of 50 S ribosomal subunit assembly in Bacillus subtilis. J Biol Chem (2006) 1.32
A protein component at the heart of an RNA machine: the importance of protein l27 for the function of the bacterial ribosome. Mol Cell (2005) 1.30
The tandem GTPase, Der, is essential for the biogenesis of 50S ribosomal subunits in Escherichia coli. Mol Microbiol (2006) 1.27
Cooperative and critical roles for both G domains in the GTPase activity and cellular function of ribosome-associated Escherichia coli EngA. J Bacteriol (2006) 1.26
From structure and dynamics of protein L7/L12 to molecular switching in ribosome. J Biol Chem (2004) 1.21
The Caulobacter crescentus CgtAC protein cosediments with the free 50S ribosomal subunit. J Bacteriol (2004) 1.20
Ribosomal protein L27 participates in both 50 S subunit assembly and the peptidyl transferase reaction. J Biol Chem (1998) 1.12
A new essential gene of the 'minimal genome' affecting cell division. Biochimie (2000) 1.10
Location and domain structure of Escherichia coli ribosomal protein L7/L12: site specific cysteine crosslinking and attachment of fluorescent probes. Biochem Cell Biol (1996) 1.08
Conformational variability in Escherichia coli 70S ribosome as revealed by 3D cryo-electron microscopy. Int J Biochem Cell Biol (1999) 1.08
The NUG1 GTPase reveals and N-terminal RNA-binding domain that is essential for association with 60 S pre-ribosomal particles. J Biol Chem (2006) 1.07
The interaction of Ras with GTPase-activating proteins. FEBS Lett (1997) 1.07
YsxC, a putative GTP-binding protein essential for growth of Bacillus subtilis 168. J Bacteriol (2000) 1.06
Non-ribosomal factors in ribosome subunit assembly are emerging targets for new antibacterial drugs. Curr Opin Pharmacol (2006) 1.06
Archaeal ribosomal protein L1: the structure provides new insights into RNA binding of the L1 protein family. Structure (2000) 1.06
Stoichiometry and properties of the complex between ribosomal proteins L7 and L10 in solution. FEBS Lett (1978) 1.02
Crystal structure of the RNA binding ribosomal protein L1 from Thermus thermophilus. EMBO J (1996) 1.01
16S rRNA is bound to era of Streptococcus pneumoniae. J Bacteriol (1999) 0.99
Era GTPase of Escherichia coli: binding to 16S rRNA and modulation of GTPase activity by RNA and carbohydrates. Microbiology (2000) 0.99
Deletion of C-terminal residues of Escherichia coli ribosomal protein L10 causes the loss of binding of one L7/L12 dimer: ribosomes with one L7/L12 dimer are active. Biochemistry (2000) 0.98
Survey for g-proteins in the prokaryotic genomes: prediction of functional roles based on classification. Proteins (2003) 0.97
The widely conserved Era G-protein contains an RNA-binding domain required for Era function in vivo. Mol Microbiol (1999) 0.96
Cryo-electron microscopic localization of protein L7/L12 within the Escherichia coli 70 S ribosome by difference mapping and Nanogold labeling. J Biol Chem (2001) 0.93
Purification and characterization of YihA, an essential GTP-binding protein from Escherichia coli. Protein Expr Purif (2003) 0.92
Analysis of the open and closed conformations of the GTP-binding protein YsxC from Bacillus subtilis. J Mol Biol (2004) 0.90
Guanine nucleotides stabilize the binding of Bacillus subtilis Obg to ribosomes. Biochem Biophys Res Commun (2004) 0.90
Analysis of the interaction of 16S rRNA and cytoplasmic membrane with the C-terminal part of the Streptococcus pneumoniae Era GTPase. Eur J Biochem (2001) 0.89
Localization of two epitopes of protein L7/L12 to both the body and stalk of the large ribosomal subunit. Immune electron microscopy using monoclonal antibodies. J Biol Chem (1986) 0.86
Assessment of the utilization of the antisense RNA strategy to identify essential genes in heterologous bacteria. FEMS Microbiol Lett (2003) 0.82
Cross-linking of selected residues in the N- and C-terminal domains of Escherichia coli protein L7/L12 to other ribosomal proteins and the effect of elongation factor Tu. J Biol Chem (1998) 0.81
Chemical modification of thiol groups of mitochondrial F1-ATPase from the yeast Schizosaccharomyces pombe. Involvement of alpha- and gamma-subunits in the enzyme activity. J Biol Chem (1986) 0.76
In vitro interaction of eukaryotic elongation factor 2 with synthetic oligoribonucleotide that mimics GTPase domain of rat 28S ribosomal RNA. Int J Biochem Cell Biol (2002) 0.75
Identification of catabolite repression as a physiological regulator of biofilm formation by Bacillus subtilis by use of DNA microarrays. J Bacteriol (2003) 2.21
Identification of AbrB-regulated genes involved in biofilm formation by Bacillus subtilis. Mol Microbiol (2004) 2.09
Proteomics of the chloroplast envelope membranes from Arabidopsis thaliana. Mol Cell Proteomics (2003) 2.06
Incorporating genomics and bioinformatics across the life sciences curriculum. PLoS Biol (2010) 1.89
Host-microbial symbiosis in the vertebrate gastrointestinal tract and the Lactobacillus reuteri paradigm. Proc Natl Acad Sci U S A (2010) 1.59
Histamine derived from probiotic Lactobacillus reuteri suppresses TNF via modulation of PKA and ERK signaling. PLoS One (2012) 1.50
New subunits NDH-M, -N, and -O, encoded by nuclear genes, are essential for plastid Ndh complex functioning in higher plants. Plant Cell (2004) 1.50
The essential GTPase RbgA (YlqF) is required for 50S ribosome assembly in Bacillus subtilis. Mol Microbiol (2006) 1.47
Multiple GTPases participate in the assembly of the large ribosomal subunit in Bacillus subtilis. J Bacteriol (2006) 1.41
The conserved glutamate residue adjacent to the Walker-B motif is the catalytic base for ATP hydrolysis in the ATP-binding cassette transporter BmrA. J Biol Chem (2003) 1.40
Two FHA domains on an ABC transporter, Rv1747, mediate its phosphorylation by PknF, a Ser/Thr protein kinase from Mycobacterium tuberculosis. FEMS Microbiol Lett (2004) 1.33
Identification and functional analysis of two aromatic-ring-hydroxylating dioxygenases from a sphingomonas strain that degrades various polycyclic aromatic hydrocarbons. Appl Environ Microbiol (2004) 1.25
Genomic and genetic characterization of the bile stress response of probiotic Lactobacillus reuteri ATCC 55730. Appl Environ Microbiol (2008) 1.23
A survey of the plant mitochondrial proteome in relation to development. Proteomics (2002) 1.21
The essential GTPase YqeH is required for proper ribosome assembly in Bacillus subtilis. J Bacteriol (2007) 1.21
Identification of pyrene-induced proteins in Mycobacterium sp. strain 6PY1: evidence for two ring-hydroxylating dioxygenases. J Bacteriol (2003) 1.21
High efficiency recombineering in lactic acid bacteria. Nucleic Acids Res (2012) 1.21
Three-dimensional structure by cryo-electron microscopy of YvcC, an homodimeric ATP-binding cassette transporter from Bacillus subtilis. J Mol Biol (2002) 1.20
The early response to acid shock in Lactobacillus reuteri involves the ClpL chaperone and a putative cell wall-altering esterase. Appl Environ Microbiol (2007) 1.15
Characterization of YvcC (BmrA), a multidrug ABC transporter constitutively expressed in Bacillus subtilis. Biochemistry (2004) 1.14
Structural maintenance of chromosomes protein of Bacillus subtilis affects supercoiling in vivo. J Bacteriol (2002) 1.14
Plant seed peroxygenase is an original heme-oxygenase with an EF-hand calcium binding motif. J Biol Chem (2006) 1.13
The lactococcal phages Tuc2009 and TP901-1 incorporate two alternate forms of their tail fiber into their virions for infection specialization. J Biol Chem (2013) 1.11
Dynamics of a bacterial multidrug ABC transporter in the inward- and outward-facing conformations. Proc Natl Acad Sci U S A (2012) 1.06
The Q-loop disengages from the first intracellular loop during the catalytic cycle of the multidrug ABC transporter BmrA. J Biol Chem (2005) 1.06
Staphylococcus aureus operates protein-tyrosine phosphorylation through a specific mechanism. J Biol Chem (2006) 1.06
PscF is a major component of the Pseudomonas aeruginosa type III secretion needle. FEMS Microbiol Lett (2005) 1.05
The antimicrobial compound reuterin (3-hydroxypropionaldehyde) induces oxidative stress via interaction with thiol groups. Microbiology (2010) 1.05
Tip60 acetyltransferase activity is controlled by phosphorylation. J Biol Chem (2002) 1.04
Accurate quantification of cardiovascular biomarkers in serum using Protein Standard Absolute Quantification (PSAQ™) and selected reaction monitoring. Mol Cell Proteomics (2011) 1.04
Probiotic use decreases intestinal inflammation and increases bone density in healthy male but not female mice. J Cell Physiol (2013) 1.04
Exploring optimization parameters to increase ssDNA recombineering in Lactococcus lactis and Lactobacillus reuteri. Bioengineered (2012) 1.01
Syntaxin 7, syntaxin 8, Vti1 and VAMP7 (vesicle-associated membrane protein 7) form an active SNARE complex for early macropinocytic compartment fusion in Dictyostelium discoideum. Biochem J (2002) 1.00
Crenarchaeal CdvA forms double-helical filaments containing DNA and interacts with ESCRT-III-like CdvB. PLoS One (2011) 0.98
Biochemical characterization of ribosome assembly GTPase RbgA in Bacillus subtilis. J Biol Chem (2012) 0.95
Functional domains of the 50S subunit mature late in the assembly process. Nucleic Acids Res (2013) 0.94
Optimized purification of a heterodimeric ABC transporter in a highly stable form amenable to 2-D crystallization. PLoS One (2011) 0.94
PatA and PatB form a functional heterodimeric ABC multidrug efflux transporter responsible for the resistance of Streptococcus pneumoniae to fluoroquinolones. Biochemistry (2012) 0.93
Highly efficient over-production in E. coli of YvcC, a multidrug-like ATP-binding cassette transporter from Bacillus subtilis. Biochim Biophys Acta (2002) 0.93
The YheI/YheH heterodimer from Bacillus subtilis is a multidrug ABC transporter. Biochim Biophys Acta (2009) 0.93
Probiotic Lactobacillus reuteri ameliorates disease due to enterohemorrhagic Escherichia coli in germfree mice. Infect Immun (2010) 0.93
The ABC transporter BmrA from Bacillus subtilis is a functional dimer when in a detergent-solubilized state. Biochem J (2006) 0.91
Global transcriptional response of Lactobacillus reuteri to the sourdough environment. Syst Appl Microbiol (2008) 0.91
Flux analysis of the Lactobacillus reuteri propanediol-utilization pathway for production of 3-hydroxypropionaldehyde, 3-hydroxypropionic acid and 1,3-propanediol from glycerol. Microb Cell Fact (2014) 0.89
Small angle neutron scattering for the study of solubilised membrane proteins. Eur Phys J E Soft Matter (2013) 0.89
A new family of phosphotransferases with a P-loop motif. J Biol Chem (2002) 0.88
Identification of proteins binding the native tubulin dimer. Biochem Biophys Res Commun (2005) 0.88
Conformational change induced by ATP binding in the multidrug ATP-binding cassette transporter BmrA. Biochemistry (2008) 0.88
Cyclopropane fatty acid synthase mutants of probiotic human-derived Lactobacillus reuteri are defective in TNF inhibition. Gut Microbes (2011) 0.87
PSAQ™ standards for accurate MS-based quantification of proteins: from the concept to biomedical applications. J Mass Spectrom (2012) 0.87
The ATPase activity of an 'essential' Bacillus subtilis enzyme, YdiB, is required for its cellular function and is modulated by oligomerization. Microbiology (2009) 0.86
Peptide storage: are you getting the best return on your investment? Defining optimal storage conditions for proteomics samples. J Proteome Res (2009) 0.86
Evaluation of reuterin production in urogenital probiotic Lactobacillus reuteri RC-14. Appl Environ Microbiol (2008) 0.85
Role of Lactobacillus reuteri cell and mucus-binding protein A (CmbA) in adhesion to intestinal epithelial cells and mucus in vitro. Microbiology (2014) 0.84
Gene dosage-dependent negative regulatory role of β-arrestin-2 in polymicrobial infection-induced inflammation. Infect Immun (2013) 0.84
Precision genome engineering in lactic acid bacteria. Microb Cell Fact (2014) 0.83
Tyrosine-kinase Wzc from Escherichia coli possesses an ATPase activity regulated by autophosphorylation. FEMS Microbiol Lett (2007) 0.83
Potassium acts as a GTPase-activating element on each nucleotide-binding domain of the essential Bacillus subtilis EngA. PLoS One (2012) 0.83
Structuring detergents for extracting and stabilizing functional membrane proteins. PLoS One (2011) 0.82
Mutational analysis of the ribosome assembly GTPase RbgA provides insight into ribosome interaction and ribosome-stimulated GTPase activation. Nucleic Acids Res (2013) 0.82
Sorting of the v-SNARE VAMP7 in Dictyostelium discoideum: a role for more than one Adaptor Protein (AP) complex. Exp Cell Res (2008) 0.82
Phosphorylation of CpgA protein enhances both its GTPase activity and its affinity for ribosome and is crucial for Bacillus subtilis growth and morphology. J Biol Chem (2012) 0.82
Time-resolved fluorescence resonance energy transfer shows that the bacterial multidrug ABC half-transporter BmrA functions as a homodimer. Biochemistry (2005) 0.81
Glycerol supplementation enhances L. reuteri's protective effect against S. Typhimurium colonization in a 3-D model of colonic epithelium. PLoS One (2012) 0.81
Probing the conformation of the resting state of a bacterial multidrug ABC transporter, BmrA, by a site-directed spin labeling approach. Protein Sci (2009) 0.81
Insights into the functioning of Bacillus subtilis HPr kinase/phosphatase: affinity for its protein substrates and role of cations and phosphate. Biochemistry (2002) 0.79
Mass spectrometry-based absolute protein quantification: PSAQ™ strategy makes use of "noncanonical" proteotypic peptides. Proteomics (2012) 0.79
Mutual regulation of Crl and Fur in Escherichia coli W3110. Mol Cell Proteomics (2007) 0.79
Regulation and mutational analysis of the HPr kinase/phosphorylase from Bacillus subtilis. Biochemistry (2003) 0.79
Development of a Protein Standard Absolute Quantification (PSAQ™) assay for the quantification of Staphylococcus aureus enterotoxin A in serum. J Proteomics (2011) 0.78
High-density rafts preferentially host the complement activator measles virus F glycoprotein but not the regulators of complement activation. Mol Immunol (2008) 0.78
Binding, reconstitution and 2D crystallization of membrane or soluble proteins onto functionalized lipid layer observed in situ by reflected light microscopy. J Struct Biol (2010) 0.78
Structural insight into the cooperativity between catalytic and noncatalytic sites of F1-ATPase. Biochim Biophys Acta (2004) 0.77
The human microbiome and infectious diseases: beyond koch. Interdiscip Perspect Infect Dis (2009) 0.77
Folding and turnover of human iron regulatory protein 1 depend on its subcellular localization. FEBS J (2007) 0.77
Sedimentation velocity analytical ultracentrifugation in hydrogenated and deuterated solvents for the characterization of membrane proteins. Methods Mol Biol (2013) 0.77
Hijacking of the pleiotropic cytokine interferon-γ by the type III secretion system of Yersinia pestis. PLoS One (2010) 0.76
Characterization of hydrophobic peptides in the presence of detergent by photoionization mass spectrometry. PLoS One (2013) 0.75
DIGESTIF: a universal quality standard for the control of bottom-up proteomics experiments. J Proteome Res (2014) 0.75
A practical synthesis of 5-lipoxygenase inhibitor MK-0633. J Org Chem (2010) 0.75