Published in J Bacteriol on July 01, 2011
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Lipids in the inner membrane of dormant spores of Bacillus species are largely immobile. Proc Natl Acad Sci U S A (2004) 1.52
Germination proteins in the inner membrane of dormant Bacillus subtilis spores colocalize in a discrete cluster. Mol Microbiol (2011) 1.49
Identification of an in vivo inhibitor of Bacillus anthracis spore germination. J Biol Chem (2007) 1.47
Role of GerD in germination of Bacillus subtilis spores. J Bacteriol (2006) 1.44
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Factors affecting variability in time between addition of nutrient germinants and rapid dipicolinic acid release during germination of spores of Bacillus species. J Bacteriol (2010) 1.27
Germination of individual Bacillus subtilis spores with alterations in the GerD and SpoVA proteins, which are important in spore germination. J Bacteriol (2011) 1.15
Analysis of factors influencing the rate of germination of spores of Bacillus subtilis by very high pressure. J Appl Microbiol (2007) 1.01
Rules for modeling signal-transduction systems. Sci STKE (2006) 3.86
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The forespore line of gene expression in Bacillus subtilis. J Mol Biol (2006) 2.52
A network model of early events in epidermal growth factor receptor signaling that accounts for combinatorial complexity. Biosystems (2005) 2.36
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Efficient modeling, simulation and coarse-graining of biological complexity with NFsim. Nat Methods (2010) 2.24
Effects of overexpression of nutrient receptors on germination of spores of Bacillus subtilis. J Bacteriol (2003) 2.21
The complexity of complexes in signal transduction. Biotechnol Bioeng (2003) 2.20
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Cooperativity between different nutrient receptors in germination of spores of Bacillus subtilis and reduction of this cooperativity by alterations in the GerB receptor. J Bacteriol (2006) 1.87
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The products of the spoVA operon are involved in dipicolinic acid uptake into developing spores of Bacillus subtilis. J Bacteriol (2002) 1.72
Studies of the commitment step in the germination of spores of bacillus species. J Bacteriol (2010) 1.68
Isolation and characterization of superdormant spores of Bacillus species. J Bacteriol (2009) 1.65
High-throughput synergy screening identifies microbial metabolites as combination agents for the treatment of fungal infections. Proc Natl Acad Sci U S A (2007) 1.62
Role of SpoVA proteins in release of dipicolinic acid during germination of Bacillus subtilis spores triggered by dodecylamine or lysozyme. J Bacteriol (2006) 1.57
Identification of a new gene essential for germination of Bacillus subtilis spores with Ca2+-dipicolinate. J Bacteriol (2003) 1.55
Localization of the cortex lytic enzyme CwlJ in spores of Bacillus subtilis. J Bacteriol (2002) 1.54
Characterization of Clostridium perfringens spores that lack SpoVA proteins and dipicolinic acid. J Bacteriol (2008) 1.53
Lipids in the inner membrane of dormant spores of Bacillus species are largely immobile. Proc Natl Acad Sci U S A (2004) 1.52
Germination proteins in the inner membrane of dormant Bacillus subtilis spores colocalize in a discrete cluster. Mol Microbiol (2011) 1.49
How moist heat kills spores of Bacillus subtilis. J Bacteriol (2007) 1.48
Role of GerD in germination of Bacillus subtilis spores. J Bacteriol (2006) 1.44
A soluble protein is immobile in dormant spores of Bacillus subtilis but is mobile in germinated spores: implications for spore dormancy. Proc Natl Acad Sci U S A (2003) 1.43
The Bacillus subtilis spore coat provides "eat resistance" during phagocytic predation by the protozoan Tetrahymena thermophila. Proc Natl Acad Sci U S A (2005) 1.42
Localization of SpoVAD to the inner membrane of spores of Bacillus subtilis. J Bacteriol (2005) 1.42
Mechanisms of induction of germination of Bacillus subtilis spores by high pressure. Appl Environ Microbiol (2002) 1.42
Medium optimization for the production of avermectin B1a by Streptomyces avermitilis 14-12A using response surface methodology. Bioresour Technol (2009) 1.37
Effects of a gerF (lgt) mutation on the germination of spores of Bacillus subtilis. J Bacteriol (2004) 1.35
Levels of Ca2+-dipicolinic acid in individual bacillus spores determined using microfluidic Raman tweezers. J Bacteriol (2007) 1.30
The solar UV environment and bacterial spore UV resistance: considerations for Earth-to-Mars transport by natural processes and human spaceflight. Mutat Res (2005) 1.30
Elastic and inelastic light scattering from single bacterial spores in an optical trap allows the monitoring of spore germination dynamics. Anal Chem (2009) 1.29
Factors influencing germination of Bacillus subtilis spores via activation of nutrient receptors by high pressure. Appl Environ Microbiol (2005) 1.28
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Structure of a protein-DNA complex essential for DNA protection in spores of Bacillus species. Proc Natl Acad Sci U S A (2008) 1.27
Analysis of the germination of spores of Bacillus subtilis with temperature sensitive spo mutations in the spoVA operon. FEMS Microbiol Lett (2004) 1.25
Toward a quantitative theory of intrinsically disordered proteins and their function. Proc Natl Acad Sci U S A (2009) 1.25
Clostridium perfringens spore germination: characterization of germinants and their receptors. J Bacteriol (2007) 1.24
Combination of Raman tweezers and quantitative differential interference contrast microscopy for measurement of dynamics and heterogeneity during the germination of individual bacterial spores. J Biomed Opt (2010) 1.23
SleC is essential for cortex peptidoglycan hydrolysis during germination of spores of the pathogenic bacterium Clostridium perfringens. J Bacteriol (2009) 1.22
Role of dipicolinic acid in resistance and stability of spores of Bacillus subtilis with or without DNA-protective alpha/beta-type small acid-soluble proteins. J Bacteriol (2006) 1.21
Analysis and verification of the HMGB1 signaling pathway. BMC Bioinformatics (2010) 1.20
Interaction between individual protein components of the GerA and GerB nutrient receptors that trigger germination of Bacillus subtilis spores. J Bacteriol (2005) 1.19
Role of dipicolinic acid in the germination, stability, and viability of spores of Bacillus subtilis. J Bacteriol (2008) 1.19
Aggregation of membrane proteins by cytosolic cross-linkers: theory and simulation of the LAT-Grb2-SOS1 system. Biophys J (2009) 1.19
Investigating the role of small, acid-soluble spore proteins (SASPs) in the resistance of Clostridium perfringens spores to heat. BMC Microbiol (2006) 1.19
Simulation of large-scale rule-based models. Bioinformatics (2009) 1.18
Stochastic effects and bistability in T cell receptor signaling. J Theor Biol (2008) 1.17
Germination of individual Bacillus subtilis spores with alterations in the GerD and SpoVA proteins, which are important in spore germination. J Bacteriol (2011) 1.15
Effects of sporulation conditions on the germination and germination protein levels of Bacillus subtilis spores. Appl Environ Microbiol (2012) 1.14
Transglutaminase-mediated cross-linking of GerQ in the coats of Bacillus subtilis spores. J Bacteriol (2004) 1.14
Role of a SpoVA protein in dipicolinic acid uptake into developing spores of Bacillus subtilis. J Bacteriol (2012) 1.13
Superdormant spores of Bacillus species have elevated wet-heat resistance and temperature requirements for heat activation. J Bacteriol (2009) 1.13
Antisense-RNA-mediated decreased synthesis of small, acid-soluble spore proteins leads to decreased resistance of clostridium perfringens spores to moist heat and UV radiation. Appl Environ Microbiol (2007) 1.12
Gene expression in Bacillus subtilis surface biofilms with and without sporulation and the importance of yveR for biofilm maintenance. Biotechnol Bioeng (2004) 1.12
Characterization of bacterial spore germination using phase-contrast and fluorescence microscopy, Raman spectroscopy and optical tweezers. Nat Protoc (2011) 1.12
Localization of the germination protein GerD to the inner membrane in Bacillus subtilis spores. J Bacteriol (2008) 1.12
The duration of T cell stimulation is a critical determinant of cell fate and plasticity. Sci Signal (2013) 1.12
Germination protein levels and rates of germination of spores of Bacillus subtilis with overexpressed or deleted genes encoding germination proteins. J Bacteriol (2012) 1.11
The physical state of water in bacterial spores. Proc Natl Acad Sci U S A (2009) 1.09
Modeling multivalent ligand-receptor interactions with steric constraints on configurations of cell-surface receptor aggregates. Biophys J (2010) 1.09
Analysis of interactions between nutrient germinant receptors and SpoVA proteins of Bacillus subtilis spores. FEMS Microbiol Lett (2007) 1.08
Levels of germination proteins in dormant and superdormant spores of Bacillus subtilis. J Bacteriol (2012) 1.07
Photosensitization of DNA by dipicolinic acid, a major component of spores of Bacillus species. Photochem Photobiol Sci (2005) 1.07
The protease CspB is essential for initiation of cortex hydrolysis and dipicolinic acid (DPA) release during germination of spores of Clostridium perfringens type A food poisoning isolates. Microbiology (2009) 1.07
Release of small molecules during germination of spores of Bacillus Species. J Bacteriol (2008) 1.06
Modeling the early signaling events mediated by FcepsilonRI. Mol Immunol (2002) 1.05
Guidelines for visualizing and annotating rule-based models. Mol Biosyst (2011) 1.05
Characterization of bacterial spore germination using integrated phase contrast microscopy, Raman spectroscopy, and optical tweezers. Anal Chem (2010) 1.04
Characterization of spores of Bacillus subtilis that lack most coat layers. J Bacteriol (2008) 1.04
Rule-based modeling: a computational approach for studying biomolecular site dynamics in cell signaling systems. Wiley Interdiscip Rev Syst Biol Med (2013) 1.04
Structure-based kinetic models of modular signaling protein function: focus on Shp2. Biophys J (2007) 1.03
RuleBender: integrated modeling, simulation and visualization for rule-based intracellular biochemistry. BMC Bioinformatics (2012) 1.03
Structure-based functional studies of the effects of amino acid substitutions in GerBC, the C subunit of the Bacillus subtilis GerB spore germinant receptor. J Bacteriol (2011) 1.02
Identification of new proteins that modulate the germination of spores of bacillus species. J Bacteriol (2013) 1.02
Carbon-fate maps for metabolic reactions. Bioinformatics (2007) 1.01
Monitoring rates and heterogeneity of high-pressure germination of bacillus spores by phase-contrast microscopy of individual spores. Appl Environ Microbiol (2013) 1.01
Roles of small, acid-soluble spore proteins and core water content in survival of Bacillus subtilis spores exposed to environmental solar UV radiation. Appl Environ Microbiol (2009) 1.01
Structure and mechanism of action of a cofactor-dependent phosphoglycerate mutase homolog from Bacillus stearothermophilus with broad specificity phosphatase activity. J Mol Biol (2002) 1.00
Detailed qualitative dynamic knowledge representation using a BioNetGen model of TLR-4 signaling and preconditioning. Math Biosci (2008) 0.99
Characterization of wet-heat inactivation of single spores of bacillus species by dual-trap Raman spectroscopy and elastic light scattering. Appl Environ Microbiol (2010) 0.99
Structure of the DNA-SspC complex: implications for DNA packaging, protection, and repair in bacterial spores. J Bacteriol (2004) 0.99
Effects of the SpoVT regulatory protein on the germination and germination protein levels of spores of Bacillus subtilis. J Bacteriol (2012) 0.98
Growth, osmotic downshock resistance and differentiation of Bacillus subtilis strains lacking mechanosensitive channels. Arch Microbiol (2007) 0.98
Role of the Nfo (YqfS) and ExoA apurinic/apyrimidinic endonucleases in protecting Bacillus subtilis spores from DNA damage. J Bacteriol (2005) 0.98
Effects of cortex peptidoglycan structure and cortex hydrolysis on the kinetics of Ca(2+)-dipicolinic acid release during Bacillus subtilis spore germination. J Bacteriol (2011) 0.98
Localization of the transglutaminase cross-linking sites in the Bacillus subtilis spore coat protein GerQ. J Bacteriol (2006) 0.97
Topology and accessibility of germination proteins in the Bacillus subtilis spore inner membrane. J Bacteriol (2013) 0.97
YtkD and MutT protect vegetative cells but not spores of Bacillus subtilis from oxidative stress. J Bacteriol (2006) 0.97
Numbers of individual nutrient germinant receptors and other germination proteins in spores of Bacillus subtilis. J Bacteriol (2013) 0.96
Effects of Mn and Fe levels on Bacillus subtilis spore resistance and effects of Mn2+, other divalent cations, orthophosphate, and dipicolinic acid on protein resistance to ionizing radiation. Appl Environ Microbiol (2010) 0.96
Kinetics of germination of wet-heat-treated individual spores of Bacillus species, monitored by Raman spectroscopy and differential interference contrast microscopy. Appl Environ Microbiol (2011) 0.96
Differential gene expression to investigate the effect of (5Z)-4-bromo- 5-(bromomethylene)-3-butyl-2(5H)-furanone on Bacillus subtilis. Appl Environ Microbiol (2004) 0.96
RuleBender: a visual interface for rule-based modeling. Bioinformatics (2011) 0.95
Computational models of tandem SRC homology 2 domain interactions and application to phosphoinositide 3-kinase. J Biol Chem (2008) 0.95
Transcription of the Bacillus subtilis gerK operon, which encodes a spore germinant receptor, and comparison with that of operons encoding other germinant receptors. J Bacteriol (2006) 0.95
The mitogen-activated protein kinome from Anopheles gambiae: identification, phylogeny and functional characterization of the ERK, JNK and p38 MAP kinases. BMC Genomics (2011) 0.94
Analysis of the effects of a gerP mutation on the germination of spores of Bacillus subtilis. J Bacteriol (2012) 0.94
Roles of DacB and spm proteins in clostridium perfringens spore resistance to moist heat, chemicals, and UV radiation. Appl Environ Microbiol (2008) 0.94