Published in EMBO J on May 11, 2012
The Arabidopsis nucleosome remodeler DDM1 allows DNA methyltransferases to access H1-containing heterochromatin. Cell (2013) 3.27
Loss of the DNA methyltransferase MET1 Induces H3K9 hypermethylation at PcG target genes and redistribution of H3K27 trimethylation to transposons in Arabidopsis thaliana. PLoS Genet (2012) 1.48
The shocking consequences of hybrid epigenomes. Genome Biol (2016) 1.39
DNA methylation pathways and their crosstalk with histone methylation. Nat Rev Mol Cell Biol (2015) 1.29
RNA-binding protein regulates plant DNA methylation by controlling mRNA processing at the intronic heterochromatin-containing gene IBM1. Proc Natl Acad Sci U S A (2013) 1.04
Arabidopsis EDM2 promotes IBM1 distal polyadenylation and regulates genome DNA methylation patterns. Proc Natl Acad Sci U S A (2013) 1.00
The First Rule of Plant Transposable Element Silencing: Location, Location, Location. Plant Cell (2016) 0.96
Epigenome confrontation triggers immediate reprogramming of DNA methylation and transposon silencing in Arabidopsis thaliana F1 epihybrids. Proc Natl Acad Sci U S A (2016) 0.94
Genome-wide negative feedback drives transgenerational DNA methylation dynamics in Arabidopsis. PLoS Genet (2015) 0.93
Methylation-sensitive expression of a DNA demethylase gene serves as an epigenetic rheostat. PLoS Genet (2015) 0.92
Mutation of a major CG methylase in rice causes genome-wide hypomethylation, dysregulated genome expression, and seedling lethality. Proc Natl Acad Sci U S A (2014) 0.91
Transcription termination and chimeric RNA formation controlled by Arabidopsis thaliana FPA. PLoS Genet (2013) 0.91
REPRESSOR OF SILENCING5 Encodes a Member of the Small Heat Shock Protein Family and Is Required for DNA Demethylation in Arabidopsis. Plant Cell (2014) 0.90
HIF3A DNA Methylation Is Associated with Childhood Obesity and ALT. PLoS One (2015) 0.90
Mutations in EDM2 selectively affect silencing states of transposons and induce plant developmental plasticity. Sci Rep (2013) 0.87
Epigenetic regulation of intragenic transposable elements impacts gene transcription in Arabidopsis thaliana. Nucleic Acids Res (2015) 0.86
SHOOT GROWTH1 maintains Arabidopsis epigenomes by regulating IBM1. PLoS One (2014) 0.85
Vernalization treatment induces site-specific DNA hypermethylation at the VERNALIZATION-A1 (VRN-A1) locus in hexaploid winter wheat. BMC Plant Biol (2013) 0.83
Evolution and function of genomic imprinting in plants. Genes Dev (2015) 0.82
Epigenetic alterations at genomic loci modified by gene targeting in Arabidopsis thaliana. PLoS One (2013) 0.78
DNA Methylation within Transcribed Regions. Plant Physiol (2015) 0.78
Osteogenic gene transcription is regulated via gap junction-mediated cell-cell communication. Stem Cells Dev (2015) 0.76
A JUMONJI Protein with E3 Ligase and Histone H3 Binding Activities Affects Transposon Silencing in Arabidopsis. Plant Physiol (2016) 0.76
Conserved imprinting associated with unique epigenetic signatures in the Arabidopsis genus. Nat Plants (2016) 0.76
Putting DNA methylation in context: from genomes to gene expression in plants. Biochim Biophys Acta (2016) 0.75
Cytosine methylation at CpCpG sites triggers accumulation of non-CpG methylation in gene bodies. Nucleic Acids Res (2017) 0.75
A protein complex regulates RNA processing of intronic heterochromatin-containing genes in Arabidopsis. Proc Natl Acad Sci U S A (2017) 0.75
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature (2000) 70.33
DNA methylation patterns and epigenetic memory. Genes Dev (2002) 33.83
Highly integrated single-base resolution maps of the epigenome in Arabidopsis. Cell (2008) 32.65
Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning. Nature (2008) 26.78
Regulation of chromatin structure by site-specific histone H3 methyltransferases. Nature (2000) 18.26
Establishing, maintaining and modifying DNA methylation patterns in plants and animals. Nat Rev Genet (2010) 15.70
Genome-wide high-resolution mapping and functional analysis of DNA methylation in arabidopsis. Cell (2006) 15.24
Methylation of a CTCF-dependent boundary controls imprinted expression of the Igf2 gene. Nature (2000) 14.91
CTCF mediates methylation-sensitive enhancer-blocking activity at the H19/Igf2 locus. Nature (2000) 12.97
Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription. Nat Genet (2006) 11.88
Histone demethylation by a family of JmjC domain-containing proteins. Nature (2005) 10.36
Methylation-induced repression--belts, braces, and chromatin. Cell (1999) 9.89
Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase. Nature (2002) 9.51
Heterochromatin revisited. Nat Rev Genet (2007) 8.70
JmjC-domain-containing proteins and histone demethylation. Nat Rev Genet (2006) 6.65
Arabidopsis thaliana DNA methylation mutants. Science (1993) 6.63
Plant nuclear RNA polymerase IV mediates siRNA and DNA methylation-dependent heterochromatin formation. Cell (2005) 6.56
Gardening the genome: DNA methylation in Arabidopsis thaliana. Nat Rev Genet (2005) 6.39
JHDM2A, a JmjC-containing H3K9 demethylase, facilitates transcription activation by androgen receptor. Cell (2006) 5.54
CTCF-promoted RNA polymerase II pausing links DNA methylation to splicing. Nature (2011) 5.50
Role of the arabidopsis DRM methyltransferases in de novo DNA methylation and gene silencing. Curr Biol (2002) 5.47
Relationship between nucleosome positioning and DNA methylation. Nature (2010) 5.27
Maintenance of CpG methylation is essential for epigenetic inheritance during plant gametogenesis. Nat Genet (2003) 4.70
Basic mechanisms of transcript elongation and its regulation. Annu Rev Biochem (1997) 4.63
Genomewide comparative analysis of alternative splicing in plants. Proc Natl Acad Sci U S A (2006) 4.51
Role of the DRM and CMT3 methyltransferases in RNA-directed DNA methylation. Curr Biol (2003) 4.27
Histone H2A.Z and DNA methylation are mutually antagonistic chromatin marks. Nature (2008) 4.20
The late flowering phenotype of fwa mutants is caused by gain-of-function epigenetic alleles of a homeodomain gene. Mol Cell (2000) 4.16
Selection for short introns in highly expressed genes. Nat Genet (2002) 4.04
Distinction and relationship between elongation rate and processivity of RNA polymerase II in vivo. Mol Cell (2005) 4.00
A novel sequence-specific DNA binding protein which interacts with three regularly spaced direct repeats of the CCCTC-motif in the 5'-flanking sequence of the chicken c-myc gene. Oncogene (1990) 3.96
Arabidopsis MET1 cytosine methyltransferase mutants. Genetics (2003) 3.90
Distinct mechanisms determine transposon inheritance and methylation via small interfering RNA and histone modification. PLoS Biol (2003) 3.71
The SRA methyl-cytosine-binding domain links DNA and histone methylation. Curr Biol (2007) 3.70
Transgenerational stability of the Arabidopsis epigenome is coordinated by CG methylation. Cell (2007) 3.70
DNA methylation profiling identifies CG methylation clusters in Arabidopsis genes. Curr Biol (2005) 3.54
Dual histone H3 methylation marks at lysines 9 and 27 required for interaction with CHROMOMETHYLASE3. EMBO J (2004) 3.51
DNA methylation controls histone H3 lysine 9 methylation and heterochromatin assembly in Arabidopsis. EMBO J (2002) 3.50
Modular cloning in plant cells. Trends Plant Sci (2005) 3.46
RNAi, DRD1, and histone methylation actively target developmentally important non-CG DNA methylation in arabidopsis. PLoS Genet (2006) 3.41
Nucleosome-interacting proteins regulated by DNA and histone methylation. Cell (2010) 3.25
Endogenous targets of RNA-directed DNA methylation and Pol IV in Arabidopsis. EMBO J (2006) 3.19
Dimethylation of histone H3 lysine 9 is a critical mark for DNA methylation and gene silencing in Arabidopsis thaliana. Chromosoma (2004) 3.00
Genome-wide analysis of mono-, di- and trimethylation of histone H3 lysine 4 in Arabidopsis thaliana. Genome Biol (2009) 2.86
The Arabidopsis thaliana genome contains at least 29 active genes encoding SET domain proteins that can be assigned to four evolutionarily conserved classes. Nucleic Acids Res (2001) 2.70
Erasure of CpG methylation in Arabidopsis alters patterns of histone H3 methylation in heterochromatin. Proc Natl Acad Sci U S A (2003) 2.70
Genome-wide association of histone H3 lysine nine methylation with CHG DNA methylation in Arabidopsis thaliana. PLoS One (2008) 2.69
Pause sites promote transcriptional termination of mammalian RNA polymerase II. Mol Cell Biol (2006) 2.56
DNA methylation and epigenetics. Annu Rev Plant Biol (2004) 2.54
Bursts of retrotransposition reproduced in Arabidopsis. Nature (2009) 2.50
Locus-specific control of DNA methylation by the Arabidopsis SUVH5 histone methyltransferase. Plant Cell (2006) 2.46
Selective epigenetic control of retrotransposition in Arabidopsis. Nature (2009) 2.41
Distinct regulation of histone H3 methylation at lysines 27 and 9 by CpG methylation in Arabidopsis. EMBO J (2005) 2.37
Imprinting of the MEA Polycomb gene is controlled by antagonism between MET1 methyltransferase and DME glycosylase. Dev Cell (2003) 2.24
Heritable epigenetic mutation of a transposon-flanked Arabidopsis gene due to lack of the chromatin-remodeling factor DDM1. EMBO J (2007) 2.05
Pivotal role of AtSUVH2 in heterochromatic histone methylation and gene silencing in Arabidopsis. EMBO J (2005) 2.04
VIM1, a methylcytosine-binding protein required for centromeric heterochromatinization. Genes Dev (2007) 2.01
Kismeth: analyzer of plant methylation states through bisulfite sequencing. BMC Bioinformatics (2008) 2.01
An Arabidopsis jmjC domain protein protects transcribed genes from DNA methylation at CHG sites. EMBO J (2009) 2.00
Control of genic DNA methylation by a jmjC domain-containing protein in Arabidopsis thaliana. Science (2008) 1.92
Genome-wide, high-resolution DNA methylation profiling using bisulfite-mediated cytosine conversion. Genome Res (2008) 1.68
H3 lysine 9 methylation is maintained on a transcribed inverted repeat by combined action of SUVH6 and SUVH4 methyltransferases. Mol Cell Biol (2005) 1.56
Three SRA-domain methylcytosine-binding proteins cooperate to maintain global CpG methylation and epigenetic silencing in Arabidopsis. PLoS Genet (2008) 1.54
Epigenetic modifications in plants: an evolutionary perspective. Curr Opin Plant Biol (2011) 1.45
DNA methylation prevents CTCF-mediated silencing of the oncogene BCL6 in B cell lymphomas. J Exp Med (2010) 1.39
Autocatalytic differentiation of epigenetic modifications within the Arabidopsis genome. EMBO J (2010) 1.23
DNA methylation and the formation of heterochromatin in Neurospora crassa. Heredity (Edinb) (2010) 1.16
Genetic interactions between DNA demethylation and methylation in Arabidopsis. Plant Physiol (2007) 1.13
Loss of the insulator protein CTCF during nematode evolution. BMC Mol Biol (2009) 1.02
Methylation at CpG islands in intron 1 of EGR2 confers enhancer-like activity. FEBS Lett (2003) 1.01
ORTH/VIM proteins that regulate DNA methylation are functional ubiquitin E3 ligases. Plant J (2008) 1.00
CTCF is a DNA methylation-sensitive positive regulator of the INK/ARF locus. Biochem Biophys Res Commun (2010) 0.97
AtMBD9: a protein with a methyl-CpG-binding domain regulates flowering time and shoot branching in Arabidopsis. Plant J (2006) 0.94
AtMBD9 modulates Arabidopsis development through the dual epigenetic pathways of DNA methylation and histone acetylation. Plant J (2009) 0.83
A receptor kinase gene regulating symbiotic nodule development. Nature (2002) 4.44
Bursts of retrotransposition reproduced in Arabidopsis. Nature (2009) 2.50
Selective epigenetic control of retrotransposition in Arabidopsis. Nature (2009) 2.41
Stress-induced activation of heterochromatic transcription. PLoS Genet (2010) 1.51
MOM1 mediates DNA-methylation-independent silencing of repetitive sequences in Arabidopsis. EMBO Rep (2006) 1.44
Epigenetic regulation of transcription in intermediate heterochromatin. EMBO Rep (2006) 1.33
Arabidopsis anaphase-promoting complexes: multiple activators and wide range of substrates might keep APC perpetually busy. Cell Cycle (2005) 1.30
18F-FDG PET/CT imaging for an early assessment of response to sunitinib in metastatic renal carcinoma: preliminary study. Cancer Biother Radiopharm (2009) 1.22
Analysis of the 5S RNA pool in Arabidopsis thaliana: RNAs are heterogeneous and only two of the genomic 5S loci produce mature 5S RNA. Genome Res (2002) 1.16
In situ dynamics of microbial communities during decomposition of wheat, rape, and alfalfa residues. Microb Ecol (2010) 1.14
A "mille-feuille" of silencing: epigenetic control of transposable elements. Biochim Biophys Acta (2011) 1.12
Stability of soil microbial structure and activity depends on microbial diversity. Environ Microbiol Rep (2013) 1.07
Direct role of a viroid RNA motif in mediating directional RNA trafficking across a specific cellular boundary. Plant Cell (2004) 1.06
Divergent evolution of CHD3 proteins resulted in MOM1 refining epigenetic control in vascular plants. PLoS Genet (2008) 1.05
The nanovirus-encoded Clink protein affects plant cell cycle regulation through interaction with the retinoblastoma-related protein. J Virol (2007) 0.97
Viroid-induced RNA silencing of GFP-viroid fusion transgenes does not induce extensive spreading of methylation or transitive silencing. Plant J (2004) 0.96
Arabidopsis eIF2alpha kinase GCN2 is essential for growth in stress conditions and is activated by wounding. BMC Plant Biol (2008) 0.95
Image-guided core-needle biopsy of peripheral lymph nodes allows the diagnosis of lymphomas. Eur Radiol (2006) 0.93
SINE RNA induces severe developmental defects in Arabidopsis thaliana and interacts with HYL1 (DRB1), a key member of the DCL1 complex. PLoS Genet (2008) 0.93
Multistrain probiotic modulation of intestinal epithelial cells' immune response to a double-stranded RNA ligand, poly(i·c). Appl Environ Microbiol (2013) 0.83
Pharmacology and immuno-virologic efficacy of once-a-day HAART in African HIV-infected children: ANRS 12103 phase II trial. Bull World Health Organ (2011) 0.82
Blunt-tip coaxial introducer: a revisited tool for difficult CT-guided biopsy in the chest and abdomen. AJR Am J Roentgenol (2009) 0.81
Liquid chromatography-electrospray mass spectrometry determination of ibogaine and noribogaine in human plasma and whole blood. Application to a poisoning involving Tabernanthe iboga root. J Chromatogr B Analyt Technol Biomed Life Sci (2006) 0.81
Identification of differentially expressed genes in a porcine in vivo model of adipogenesis using suppression subtractive hybridization. Comp Biochem Physiol Part D Genomics Proteomics (2008) 0.77
Presence and fate of carbamazepine, oxcarbazepine, and seven of their metabolites at wastewater treatment plants. Arch Environ Contam Toxicol (2008) 0.76
Distribution of ibogaine and noribogaine in a man following a poisoning involving root bark of the Tabernanthe iboga shrub. J Anal Toxicol (2006) 0.76
Parallel action of AtDRB2 and RdDM in the control of transposable element expression. BMC Plant Biol (2015) 0.76
Carbamazepine, carbamazepine epoxide and dihydroxycarbamazepine sorption to soil and occurrence in a wastewater reuse site in Tunisia. Chemosphere (2012) 0.76
Prevalence of levamisole and aminorex in patients tested positive for cocaine in a French University Hospital. Clin Toxicol (Phila) (2015) 0.75
Experimental and Kinetic Modeling Study of 2-Methyl-2-Butene: Allylic Hydrocarbon Kinetics. J Phys Chem A (2015) 0.75
Levamisole-adulterated cocaine: what about in European countries? J Psychoactive Drugs (2014) 0.75
An unusual case of death probably triggered by the association of buprenorphine at therapeutic dose with ethanol and benzodiazepines and with very low norbuprenorphine level. J Forensic Sci (2014) 0.75
Dynamics of copper and zinc sedimentation in a lagooning system receiving landfill leachate. Waste Manag (2013) 0.75
Toxicity and death following recreational use of 2-pyrrolidino valerophenone. Clin Toxicol (Phila) (2013) 0.75
Experimental and Chemical Kinetics Study of the Effects of Halon 1211 (CF2BrCl) on the Laminar Flame Speed and Ignition of Light Hydrocarbons. J Phys Chem A (2015) 0.75