Published in Nucleic Acids Res on April 07, 2010
Sporulation in the budding yeast Saccharomyces cerevisiae. Genetics (2011) 1.88
Systematic screen reveals new functional dynamics of histones H3 and H4 during gametogenesis. Genes Dev (2010) 1.17
Histone phosphorylation: a chromatin modification involved in diverse nuclear events. Epigenetics (2012) 1.14
A Screen for Germination Mutants in Saccharomyces cerevisiae. G3 (Bethesda) (2011) 0.91
Phosphorylation and arginine methylation mark histone H2A prior to deposition during Xenopus laevis development. Epigenetics Chromatin (2014) 0.86
Gamete formation resets the aging clock in yeast. Cold Spring Harb Symp Quant Biol (2011) 0.84
Osmotic stress induces phosphorylation of histone H3 at threonine 3 in pericentromeric regions of Arabidopsis thaliana. Proc Natl Acad Sci U S A (2015) 0.83
Synchronous recruitment of epigenetic modifiers to endotoxin synergistically activated Tnf-α gene in acute kidney injury. PLoS One (2013) 0.80
Automatic annotation of experimentally derived, evolutionarily conserved post-translational modifications onto multiple genomes. Database (Oxford) (2011) 0.78
H4K44 Acetylation Facilitates Chromatin Accessibility during Meiosis. Cell Rep (2015) 0.75
Middle-Down and Chemical Proteomic Approaches to Reveal Histone H4 Modification Dynamics in Cell Cycle: Label-Free Semi-Quantification of Histone Tail Peptide Modifications Including Phosphorylation and Highly Sensitive Capture of Histone PTM Binding Proteins Using Photo-Reactive Crosslinkers. Mass Spectrom (Tokyo) (2015) 0.75
Reduced dosage of the chromosome axis factor Red1 selectively disrupts the meiotic recombination checkpoint in Saccharomyces cerevisiae. PLoS Genet (2017) 0.75
Chromatin modifications and their function. Cell (2007) 55.98
A bivalent chromatin structure marks key developmental genes in embryonic stem cells. Cell (2006) 48.80
The transcriptional program of sporulation in budding yeast. Science (1998) 37.23
Combinatorial patterns of histone acetylations and methylations in the human genome. Nat Genet (2008) 18.28
The complex language of chromatin regulation during transcription. Nature (2007) 16.97
Genome-wide map of nucleosome acetylation and methylation in yeast. Cell (2005) 15.08
A high-resolution atlas of nucleosome occupancy in yeast. Nat Genet (2007) 12.21
A high-resolution map of transcription in the yeast genome. Proc Natl Acad Sci U S A (2006) 11.81
Histone H4-K16 acetylation controls chromatin structure and protein interactions. Science (2006) 11.20
Chromatin immunoprecipitation and microarray-based analysis of protein location. Nat Protoc (2006) 7.29
Single-nucleosome mapping of histone modifications in S. cerevisiae. PLoS Biol (2005) 6.37
Distinctive chromatin in human sperm packages genes for embryo development. Nature (2009) 6.18
The core meiotic transcriptome in budding yeasts. Nat Genet (2000) 4.64
Histone sumoylation is a negative regulator in Saccharomyces cerevisiae and shows dynamic interplay with positive-acting histone modifications. Genes Dev (2006) 2.15
Phosphorylation of histone H4 Ser1 regulates sporulation in yeast and is conserved in fly and mouse spermatogenesis. Genes Dev (2006) 2.05
The enhancement of histone H4 and H2A serine 1 phosphorylation during mitosis and S-phase is evolutionarily conserved. Chromosoma (2004) 1.47
Regulation of NuA4 histone acetyltransferase activity in transcription and DNA repair by phosphorylation of histone H4. Mol Cell Biol (2005) 1.46
Phosphorylation of histone H4 serine 1 during DNA damage requires casein kinase II in S. cerevisiae. Curr Biol (2005) 1.41
Modulation of the transcription regulatory program in yeast cells committed to sporulation. Genome Biol (2006) 1.26
Genome reprogramming during sporulation. Int J Dev Biol (2009) 0.99
Functional dissection of protein complexes involved in yeast chromosome biology using a genetic interaction map. Nature (2007) 9.25
IDH mutation impairs histone demethylation and results in a block to cell differentiation. Nature (2012) 7.95
Comparative analysis of RNA-Seq alignment algorithms and the RNA-Seq unified mapper (RUM). Bioinformatics (2011) 6.20
PlasmoDB: the Plasmodium genome resource. A database integrating experimental and computational data. Nucleic Acids Res (2003) 6.19
New nomenclature for chromatin-modifying enzymes. Cell (2007) 5.34
Identification of 67 histone marks and histone lysine crotonylation as a new type of histone modification. Cell (2011) 5.27
Transcriptional activation via sequential histone H2B ubiquitylation and deubiquitylation, mediated by SAGA-associated Ubp8. Genes Dev (2003) 5.13
PPARgamma and C/EBP factors orchestrate adipocyte biology via adjacent binding on a genome-wide scale. Genes Dev (2008) 4.83
p53 is regulated by the lysine demethylase LSD1. Nature (2007) 4.53
Repression of p53 activity by Smyd2-mediated methylation. Nature (2006) 4.51
The Plasmodium genome database. Nature (2002) 4.36
In vivo destabilization of dynamic microtubules by HDAC6-mediated deacetylation. EMBO J (2002) 4.28
HDAC-6 interacts with and deacetylates tubulin and microtubules in vivo. EMBO J (2003) 3.96
Histone H4 lysine 16 acetylation regulates cellular lifespan. Nature (2009) 3.83
Extracting transcription factor targets from ChIP-Seq data. Nucleic Acids Res (2009) 3.58
Differential histone modifications mark mouse imprinting control regions during spermatogenesis. EMBO J (2007) 3.46
The putative cancer stem cell marker USP22 is a subunit of the human SAGA complex required for activated transcription and cell-cycle progression. Mol Cell (2008) 3.42
Signaling kinase AMPK activates stress-promoted transcription via histone H2B phosphorylation. Science (2010) 3.05
The emerging field of dynamic lysine methylation of non-histone proteins. Curr Opin Genet Dev (2008) 3.01
Protein acetylation microarray reveals that NuA4 controls key metabolic target regulating gluconeogenesis. Cell (2009) 2.99
Carnitine palmitoyltransferase 1C promotes cell survival and tumor growth under conditions of metabolic stress. Genes Dev (2011) 2.97
Mice lacking histone deacetylase 6 have hyperacetylated tubulin but are viable and develop normally. Mol Cell Biol (2008) 2.85
Cooperative binding of two acetylation marks on a histone tail by a single bromodomain. Nature (2009) 2.83
Genomic comparison of the ants Camponotus floridanus and Harpegnathos saltator. Science (2010) 2.78
Activating signal cointegrator 2 belongs to a novel steady-state complex that contains a subset of trithorax group proteins. Mol Cell Biol (2003) 2.70
G9a and Glp methylate lysine 373 in the tumor suppressor p53. J Biol Chem (2010) 2.64
HDAC6 controls major cell response pathways to cytotoxic accumulation of protein aggregates. Genes Dev (2007) 2.56
Foxl1-Cre-marked adult hepatic progenitors have clonogenic and bilineage differentiation potential. Genes Dev (2011) 2.53
HDAC6-p97/VCP controlled polyubiquitin chain turnover. EMBO J (2006) 2.52
Genome-wide and caste-specific DNA methylomes of the ants Camponotus floridanus and Harpegnathos saltator. Curr Biol (2012) 2.50
The histone H2B-specific ubiquitin ligase RNF20/hBRE1 acts as a putative tumor suppressor through selective regulation of gene expression. Genes Dev (2008) 2.48
In vivo dual cross-linking for identification of indirect DNA-associated proteins by chromatin immunoprecipitation. Biotechniques (2006) 2.46
Epigenomic plasticity enables human pancreatic α to β cell reprogramming. J Clin Invest (2013) 2.38
PlasmoDB: the Plasmodium genome resource. An integrated database providing tools for accessing, analyzing and mapping expression and sequence data (both finished and unfinished). Nucleic Acids Res (2002) 2.37
H2B ubiquitylation acts as a barrier to Ctk1 nucleosomal recruitment prior to removal by Ubp8 within a SAGA-related complex. Mol Cell (2007) 2.32
The histone variant macroH2A interferes with transcription factor binding and SWI/SNF nucleosome remodeling. Mol Cell (2003) 2.29
Propagation of adipogenic signals through an epigenomic transition state. Genes Dev (2010) 2.23
Acetylation-dependent chromatin reorganization by BRDT, a testis-specific bromodomain-containing protein. Mol Cell Biol (2003) 2.22
Glucocorticoid receptor-dependent gene regulatory networks. PLoS Genet (2005) 2.19
Prospective isolation of a bipotential clonogenic liver progenitor cell in adult mice. Genes Dev (2011) 2.17
Genome-wide analysis reveals conserved and divergent features of Notch1/RBPJ binding in human and murine T-lymphoblastic leukemia cells. Proc Natl Acad Sci U S A (2011) 2.16
Histone sumoylation is a negative regulator in Saccharomyces cerevisiae and shows dynamic interplay with positive-acting histone modifications. Genes Dev (2006) 2.15
Domains of eIF1A that mediate binding to eIF2, eIF3 and eIF5B and promote ternary complex recruitment in vivo. EMBO J (2003) 2.12
The role of histones in chromatin remodelling during mammalian spermiogenesis. Eur J Biochem (2004) 2.10
Acetylation of yeast AMPK controls intrinsic aging independently of caloric restriction. Cell (2011) 2.10
Assembly and mechanosensory function of focal adhesions: experiments and models. Eur J Cell Biol (2005) 2.06
Foxa1 and Foxa2 are essential for sexual dimorphism in liver cancer. Cell (2012) 2.05
Phosphorylation of histone H4 Ser1 regulates sporulation in yeast and is conserved in fly and mouse spermatogenesis. Genes Dev (2006) 2.05
Foxa2 and H2A.Z mediate nucleosome depletion during embryonic stem cell differentiation. Cell (2012) 2.02
Pericentric heterochromatin reprogramming by new histone variants during mouse spermiogenesis. J Cell Biol (2007) 1.96
HSP27 is a ubiquitin-binding protein involved in I-kappaBalpha proteasomal degradation. Mol Cell Biol (2003) 1.96
MicroRNAs control intestinal epithelial differentiation, architecture, and barrier function. Gastroenterology (2010) 1.95
Histone deacetylase 9 couples neuronal activity to muscle chromatin acetylation and gene expression. Nat Neurosci (2005) 1.92
The transcriptional response of the islet to pregnancy in mice. Mol Endocrinol (2009) 1.89
A novel Rho-mDia2-HDAC6 pathway controls podosome patterning through microtubule acetylation in osteoclasts. J Cell Sci (2005) 1.87
Stress-induced transcription of satellite III repeats. J Cell Biol (2003) 1.86
Structural characterization of the histone variant macroH2A. Mol Cell Biol (2005) 1.85
A unified phylogeny-based nomenclature for histone variants. Epigenetics Chromatin (2012) 1.82
H2B ubiquitin protease Ubp8 and Sgf11 constitute a discrete functional module within the Saccharomyces cerevisiae SAGA complex. Mol Cell Biol (2005) 1.82
Tip60 is targeted to proteasome-mediated degradation by Mdm2 and accumulates after UV irradiation. EMBO J (2002) 1.81
Ectopic activation of germline and placental genes identifies aggressive metastasis-prone lung cancers. Sci Transl Med (2013) 1.79
Dynamic chromatin remodeling mediated by polycomb proteins orchestrates pancreatic differentiation of human embryonic stem cells. Cell Stem Cell (2013) 1.79
Lamin B1 depletion in senescent cells triggers large-scale changes in gene expression and the chromatin landscape. Genes Dev (2013) 1.78
Regulation of protein turnover by acetyltransferases and deacetylases. Biochimie (2007) 1.75
The SANT domain of Ada2 is required for normal acetylation of histones by the yeast SAGA complex. J Biol Chem (2002) 1.68
Widespread distribution of antisense transcripts in the Plasmodium falciparum genome. Mol Biochem Parasitol (2004) 1.68
Class II histone deacetylases are directly recruited by BCL6 transcriptional repressor. J Biol Chem (2002) 1.67
Differentiation of NUT midline carcinoma by epigenomic reprogramming. Cancer Res (2011) 1.65
Trimethylation of histone H3 lysine 4 by Set1 in the lytic infection of human herpes simplex virus 1. J Virol (2006) 1.65
From meiosis to postmeiotic events: the secrets of histone disappearance. FEBS J (2009) 1.65
Bromodomain-dependent stage-specific male genome programming by Brdt. EMBO J (2012) 1.64
SALSA, a variant of yeast SAGA, contains truncated Spt7, which correlates with activated transcription. Proc Natl Acad Sci U S A (2002) 1.62
Functional interaction between class II histone deacetylases and ICP0 of herpes simplex virus type 1. J Virol (2004) 1.59
Oncogenesis by sequestration of CBP/p300 in transcriptionally inactive hyperacetylated chromatin domains. EMBO J (2010) 1.58
Regulation of microtubule dynamics by inhibition of the tubulin deacetylase HDAC6. J Cell Sci (2009) 1.55
HDAC6 controls the kinetics of platelet activation. Blood (2012) 1.54
Histone deacetylase 3 is an epigenomic brake in macrophage alternative activation. Genes Dev (2011) 1.54
Regulatory cross-talk between lysine acetylation and ubiquitination: role in the control of protein stability. Bioessays (2005) 1.51
Genome-wide analysis of histone modifications in human pancreatic islets. Genome Res (2010) 1.51
Maintenance of low histone ubiquitylation by Ubp10 correlates with telomere-proximal Sir2 association and gene silencing. Mol Cell (2005) 1.51
The histone variant H3.3 regulates gene expression during lytic infection with herpes simplex virus type 1. J Virol (2008) 1.48
The nucleosome map of the mammalian liver. Nat Struct Mol Biol (2011) 1.47
Role of the tetradecapeptide repeat domain of human histone deacetylase 6 in cytoplasmic retention. J Biol Chem (2004) 1.47
Foxa1 and Foxa2 maintain the metabolic and secretory features of the mature beta-cell. Mol Endocrinol (2010) 1.47
Structural basis for histone and phosphohistone binding by the GCN5 histone acetyltransferase. Mol Cell (2003) 1.47
Orthogonal analysis of C/EBPbeta targets in vivo during liver proliferation. Proc Natl Acad Sci U S A (2004) 1.46
Social insect genomes exhibit dramatic evolution in gene composition and regulation while preserving regulatory features linked to sociality. Genome Res (2013) 1.45
The tale of protein lysine acetylation in the cytoplasm. J Biomed Biotechnol (2010) 1.44
LKB1 is recruited to the p21/WAF1 promoter by p53 to mediate transcriptional activation. Cancer Res (2006) 1.43
Establishment of male-specific epigenetic information. Gene (2005) 1.42
Phosphorylation of histone H4 serine 1 during DNA damage requires casein kinase II in S. cerevisiae. Curr Biol (2005) 1.41
HDAC6 a new cellular stress surveillance factor. Cell Cycle (2007) 1.40
Lysosome-mediated processing of chromatin in senescence. J Cell Biol (2013) 1.38
Senescent cells harbour features of the cancer epigenome. Nat Cell Biol (2013) 1.34
Loss of histone H4K20 trimethylation occurs in preneoplasia and influences prognosis of non-small cell lung cancer. Clin Cancer Res (2008) 1.31