Published in Plant Mol Biol on January 23, 2013
Biogenesis, turnover, and mode of action of plant microRNAs. Plant Cell (2013) 2.65
Alternative splicing at the intersection of biological timing, development, and stress responses. Plant Cell (2013) 2.63
Post-transcriptional and post-translational regulations of drought and heat response in plants: a spider's web of mechanisms. Front Plant Sci (2015) 1.01
miRNAs mediate SnRK1-dependent energy signaling in Arabidopsis. Front Plant Sci (2013) 0.93
The liverwort Pellia endiviifolia shares microtranscriptomic traits that are common to green algae and land plants. New Phytol (2014) 0.86
The crosstalk between plant microRNA biogenesis factors and the spliceosome. Plant Signal Behav (2013) 0.84
Arabidopsis microRNA expression regulation in a wide range of abiotic stress responses. Front Plant Sci (2015) 0.81
Novel insights from non-conserved microRNAs in plants. Front Plant Sci (2014) 0.80
Duplicate gene divergence by changes in microRNA binding sites in Arabidopsis and Brassica. Genome Biol Evol (2015) 0.79
AtRTD - a comprehensive reference transcript dataset resource for accurate quantification of transcript-specific expression in Arabidopsis thaliana. New Phytol (2015) 0.79
Genome-Wide Analysis of MicroRNA Responses to the Phytohormone Abscisic Acid in Populus euphratica. Front Plant Sci (2016) 0.79
Changes in RNA Splicing in Developing Soybean (Glycine max) Embryos. Biology (Basel) (2013) 0.78
Differential expression of seven conserved microRNAs in response to abiotic stress and their regulatory network in Helianthus annuus. Front Plant Sci (2015) 0.78
Exploration of alternative splicing events in ten different grapevine cultivars. BMC Genomics (2015) 0.77
Jacalin lectin At5g28520 is regulated by ABA and miR846. Plant Signal Behav (2013) 0.76
Stress-induced endogenous siRNAs targeting regulatory intron sequences in Brachypodium. RNA (2014) 0.76
Genome-Wide Analysis of Polycistronic MicroRNAs in Cultivated and Wild Rice. Genome Biol Evol (2016) 0.75
MicroRNAs Are Intensively Regulated during Induction of Somatic Embryogenesis in Arabidopsis. Front Plant Sci (2017) 0.75
New technologies accelerate the exploration of non-coding RNAs in horticultural plants. Hortic Res (2017) 0.75
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Cleavage of Scarecrow-like mRNA targets directed by a class of Arabidopsis miRNA. Science (2002) 18.37
The Microprocessor complex mediates the genesis of microRNAs. Nature (2004) 17.70
microRNA-directed phasing during trans-acting siRNA biogenesis in plants. Cell (2005) 14.81
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Intronic microRNA precursors that bypass Drosha processing. Nature (2007) 9.65
Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs. Genome Res (2007) 9.61
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Sorting of small RNAs into Arabidopsis argonaute complexes is directed by the 5' terminal nucleotide. Cell (2008) 9.02
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A plant miRNA contributes to antibacterial resistance by repressing auxin signaling. Science (2006) 7.74
The mirtron pathway generates microRNA-class regulatory RNAs in Drosophila. Cell (2007) 7.70
Widespread translational inhibition by plant miRNAs and siRNAs. Science (2008) 7.51
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Arabidopsis micro-RNA biogenesis through Dicer-like 1 protein functions. Proc Natl Acad Sci U S A (2004) 6.61
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Clustering and conservation patterns of human microRNAs. Nucleic Acids Res (2005) 4.79
The nuclear dsRNA binding protein HYL1 is required for microRNA accumulation and plant development, but not posttranscriptional transgene silencing. Curr Biol (2004) 4.69
Arabidopsis NAC1 transduces auxin signal downstream of TIR1 to promote lateral root development. Genes Dev (2000) 4.46
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MicroRNA directs mRNA cleavage of the transcription factor NAC1 to downregulate auxin signals for arabidopsis lateral root development. Plant Cell (2005) 3.88
Regulation of AUXIN RESPONSE FACTOR3 by TAS3 ta-siRNA affects developmental timing and patterning in Arabidopsis. Curr Biol (2006) 3.71
MicroRNA-directed regulation of Arabidopsis AUXIN RESPONSE FACTOR17 is essential for proper development and modulates expression of early auxin response genes. Plant Cell (2005) 3.62
An mRNA cap binding protein, ABH1, modulates early abscisic acid signal transduction in Arabidopsis. Cell (2001) 3.50
A link between RNA metabolism and silencing affecting Arabidopsis development. Dev Cell (2008) 3.39
A mutation in the Arabidopsis HYL1 gene encoding a dsRNA binding protein affects responses to abscisic acid, auxin, and cytokinin. Plant Cell (2000) 3.33
A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains. Genome Res (2008) 3.25
HEN1 functions pleiotropically in Arabidopsis development and acts in C function in the flower. Development (2002) 3.24
Evolution and functional diversification of MIRNA genes. Plant Cell (2011) 3.07
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Control of root cap formation by MicroRNA-targeted auxin response factors in Arabidopsis. Plant Cell (2005) 2.85
ABA induction of miR159 controls transcript levels of two MYB factors during Arabidopsis seed germination. Plant J (2007) 2.84
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Dual roles of the nuclear cap-binding complex and SERRATE in pre-mRNA splicing and microRNA processing in Arabidopsis thaliana. Proc Natl Acad Sci U S A (2008) 2.74
Genome-wide high-resolution mapping of exosome substrates reveals hidden features in the Arabidopsis transcriptome. Cell (2007) 2.58
A database analysis method identifies an endogenous trans-acting short-interfering RNA that targets the Arabidopsis ARF2, ARF3, and ARF4 genes. Proc Natl Acad Sci U S A (2005) 2.47
Complexity of the microRNA repertoire revealed by next-generation sequencing. RNA (2010) 2.38
MicroRNA gene evolution in Arabidopsis lyrata and Arabidopsis thaliana. Plant Cell (2010) 2.22
Dynamic isomiR regulation in Drosophila development. RNA (2010) 2.19
Arabidopsis primary microRNA processing proteins HYL1 and DCL1 define a nuclear body distinct from the Cajal body. Proc Natl Acad Sci U S A (2007) 2.12
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The FHA domain proteins DAWDLE in Arabidopsis and SNIP1 in humans act in small RNA biogenesis. Proc Natl Acad Sci U S A (2008) 1.99
Phenotypic plasticity of adventitious rooting in Arabidopsis is controlled by complex regulation of AUXIN RESPONSE FACTOR transcripts and microRNA abundance. Plant Cell (2009) 1.98
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Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage. Plant Cell (2011) 1.93
MicroRNA biogenesis via splicing and exosome-mediated trimming in Drosophila. Mol Cell (2010) 1.78
Toward a global phylogeny of the Brassicaceae. Mol Biol Evol (2006) 1.67
Drought Rhizogenesis in Arabidopsis thaliana (Differential Responses of Hormonal Mutants). Plant Physiol (1994) 1.65
Redundant and distinct functions of the ABA response loci ABA-INSENSITIVE(ABI)5 and ABRE-BINDING FACTOR (ABF)3. Plant Mol Biol (2005) 1.45
siRNAs from miRNA sites mediate DNA methylation of target genes. Nucleic Acids Res (2010) 1.38
Gene structures and processing of Arabidopsis thaliana HYL1-dependent pri-miRNAs. Nucleic Acids Res (2009) 1.36
Two cap-binding proteins CBP20 and CBP80 are involved in processing primary MicroRNAs. Plant Cell Physiol (2008) 1.35
Deep sequencing of small RNAs specifically associated with Arabidopsis AGO1 and AGO4 uncovers new AGO functions. Plant J (2011) 1.33
Stress-induced alternative splicing provides a mechanism for the regulation of microRNA processing in Arabidopsis thaliana. Mol Cell (2012) 1.31
High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis. Genome Res (2011) 1.27
Regulation of miRNA abundance by RNA binding protein TOUGH in Arabidopsis. Proc Natl Acad Sci U S A (2012) 1.27
Differential and dynamic regulation of miR398 in response to ABA and salt stress in Populus tremula and Arabidopsis thaliana. Plant Mol Biol (2009) 1.24
Auxin regulation of the microRNA390-dependent transacting small interfering RNA pathway in Arabidopsis lateral root development. Nucleic Acids Res (2009) 1.19
Transcriptional regulation of Arabidopsis MIR168a and argonaute1 homeostasis in abscisic acid and abiotic stress responses. Plant Physiol (2012) 1.19
Arabidopsis proline-rich protein important for development and abiotic stress tolerance is involved in microRNA biogenesis. Proc Natl Acad Sci U S A (2012) 1.10
MicroRNA-mediated signaling involved in plant root development. Biochem Biophys Res Commun (2010) 1.05
Plant polycistronic precursors containing non-homologous microRNAs target transcripts encoding functionally related proteins. Genome Biol (2009) 1.05
Antagonistic jacalin-related lectins regulate the size of ER body-type beta-glucosidase complexes in Arabidopsis thaliana. Plant Cell Physiol (2008) 1.01
Activation of an ER-body-localized beta-glucosidase via a cytosolic binding partner in damaged tissues of Arabidopsis thaliana. Plant Cell Physiol (2005) 1.00
Evidence for antisense transcription associated with microRNA target mRNAs in Arabidopsis. PLoS Genet (2009) 1.00
IAA-Ala Resistant3, an evolutionarily conserved target of miR167, mediates Arabidopsis root architecture changes during high osmotic stress. Plant Cell (2012) 0.99
Lectin-mediated resistance impairs plant virus infection at the cellular level. Plant Cell (2012) 0.98
Unique defense strategy by the endoplasmic reticulum body in plants. Plant Cell Physiol (2011) 0.97
The disturbance of small RNA pathways enhanced abscisic acid response and multiple stress responses in Arabidopsis. Plant Cell Environ (2008) 0.96
Large-scale identification of mirtrons in Arabidopsis and rice. PLoS One (2012) 0.95
Crosstalk between ABA and auxin signaling pathways in roots of Arabidopsis thaliana (L.) Heynh. Planta (2005) 0.91
Methods for validation of miRNA sequence variants and the cleavage of their targets. Methods (2012) 0.83
'Inc-miRs': functional intron-interrupted miRNA genes. Genes Dev (2011) 0.80
Abscisic acid signaling in seeds and seedlings. Plant Cell (2002) 9.02
Redundant and distinct functions of the ABA response loci ABA-INSENSITIVE(ABI)5 and ABRE-BINDING FACTOR (ABF)3. Plant Mol Biol (2005) 1.45
An autoregulatory feedback loop involving PAP1 and TAS4 in response to sugars in Arabidopsis. Plant Mol Biol (2011) 1.11
Evidence for antisense transcription associated with microRNA target mRNAs in Arabidopsis. PLoS Genet (2009) 1.00
ABI5 interacts with abscisic acid signaling effectors in rice protoplasts. J Biol Chem (2001) 0.99
Abscisic Acid biosynthesis and response. Arabidopsis Book (2002) 0.98
Related to ABA-Insensitive3(ABI3)/Viviparous1 and AtABI5 transcription factor coexpression in cotton enhances drought stress adaptation. Plant Biotechnol J (2014) 0.91
Analysis of antisense expression by whole genome tiling microarrays and siRNAs suggests mis-annotation of Arabidopsis orphan protein-coding genes. PLoS One (2010) 0.80
Transposable element-associated microRNA hairpins produce 21-nt sRNAs integrated into typical microRNA pathways in rice. Funct Integr Genomics (2013) 0.80
Harlequin (hlq) and short blue root (sbr), two Arabidopsis mutants that ectopically express an abscisic acid- and auxin-inducible transgenic carrot promoter and have pleiotropic effects on morphogenesis. Plant Mol Biol (2002) 0.80
Cre-lox univector acceptor vectors for functional screening in protoplasts: analysis of Arabidopsis donor cDNAs encoding ABSCISIC ACID INSENSITIVE1-like protein phosphatases. Plant Mol Biol (2009) 0.76
Jacalin lectin At5g28520 is regulated by ABA and miR846. Plant Signal Behav (2013) 0.76