Published in Genome Res on December 17, 2008
Epigenetic silencing of transposable elements: a trade-off between reduced transposition and deleterious effects on neighboring gene expression. Genome Res (2009) 2.46
Diverse pathways generate microRNA-like RNAs and Dicer-independent small interfering RNAs in fungi. Mol Cell (2010) 2.23
The genomes of the fungal plant pathogens Cladosporium fulvum and Dothistroma septosporum reveal adaptation to different hosts and lifestyles but also signatures of common ancestry. PLoS Genet (2012) 1.95
Sex or no sex: evolutionary adaptation occurs regardless. Bioessays (2014) 1.61
Amplification-free whole-genome bisulfite sequencing by post-bisulfite adaptor tagging. Nucleic Acids Res (2012) 1.61
Heterochromatic marks are associated with the repression of secondary metabolism clusters in Aspergillus nidulans. Mol Microbiol (2010) 1.58
DNA methylation pathways and their crosstalk with histone methylation. Nat Rev Mol Cell Biol (2015) 1.29
Regulation of secondary metabolism by chromatin structure and epigenetic codes. Fungal Genet Biol (2010) 1.28
The putative protein methyltransferase LAE1 controls cellulase gene expression in Trichoderma reesei. Mol Microbiol (2012) 1.22
DNA methylation and normal chromosome behavior in Neurospora depend on five components of a histone methyltransferase complex, DCDC. PLoS Genet (2010) 1.21
Heterochromatin is required for normal distribution of Neurospora crassa CenH3. Mol Cell Biol (2011) 1.18
CHD1 remodels chromatin and influences transient DNA methylation at the clock gene frequency. PLoS Genet (2011) 1.16
The Fusarium graminearum histone H3 K27 methyltransferase KMT6 regulates development and expression of secondary metabolite gene clusters. PLoS Genet (2013) 1.11
Massive changes in genome architecture accompany the transition to self-fertility in the filamentous fungus Neurospora tetrasperma. Genetics (2011) 1.10
Dynamic DNA cytosine methylation in the Populus trichocarpa genome: tissue-level variation and relationship to gene expression. BMC Genomics (2012) 1.10
Regional control of histone H3 lysine 27 methylation in Neurospora. Proc Natl Acad Sci U S A (2013) 1.09
Identification of DIM-7, a protein required to target the DIM-5 H3 methyltransferase to chromatin. Proc Natl Acad Sci U S A (2010) 1.04
Confining euchromatin/heterochromatin territory: jumonji crosses the line. Genes Dev (2010) 1.03
Functional analyses of Trichoderma reesei LAE1 reveal conserved and contrasting roles of this regulator. G3 (Bethesda) (2013) 1.03
Heterochromatin protein 1 forms distinct complexes to direct histone deacetylation and DNA methylation. Nat Struct Mol Biol (2012) 1.02
The DMM complex prevents spreading of DNA methylation from transposons to nearby genes in Neurospora crassa. Genes Dev (2010) 0.98
Neurospora crassa, a model system for epigenetics research. Cold Spring Harb Perspect Biol (2013) 0.96
Genome sequencing of the plant pathogen Taphrina deformans, the causal agent of peach leaf curl. MBio (2013) 0.93
H2B- and H3-specific histone deacetylases are required for DNA methylation in Neurospora crassa. Genetics (2010) 0.93
The genome and development-dependent transcriptomes of Pyronema confluens: a window into fungal evolution. PLoS Genet (2013) 0.93
Substitutions in the amino-terminal tail of neurospora histone H3 have varied effects on DNA methylation. PLoS Genet (2011) 0.92
Loss of HP1 causes depletion of H3K27me3 from facultative heterochromatin and gain of H3K27me2 at constitutive heterochromatin. Genome Res (2015) 0.89
Convergent transcription induces dynamic DNA methylation at disiRNA loci. PLoS Genet (2013) 0.88
DNA methylation regulates phenotype-dependent transcriptional activity in Candida albicans. Proc Natl Acad Sci U S A (2011) 0.87
Centromeres of filamentous fungi. Chromosome Res (2012) 0.85
Mapping of lysine methylation and acetylation in core histones of Neurospora crassa. Biochemistry (2010) 0.84
Genome-wide redistribution of H3K27me3 is linked to genotoxic stress and defective growth. Proc Natl Acad Sci U S A (2015) 0.84
Neurospora chromosomes are organized by blocks of importin alpha-dependent heterochromatin that are largely independent of H3K9me3. Genome Res (2016) 0.84
Regulated DNA methylation and the circadian clock: implications in cancer. Biology (Basel) (2014) 0.84
The translin-TRAX complex (C3PO) is a ribonuclease in tRNA processing. Nat Struct Mol Biol (2012) 0.83
Non-exhaustive DNA methylation-mediated transposon silencing in the black truffle genome, a complex fungal genome with massive repeat element content. Genome Biol (2014) 0.83
Endogenous Small RNA Mediates Meiotic Silencing of a Novel DNA Transposon. G3 (Bethesda) (2015) 0.82
Histone modifications rather than the novel regional centromeres of Zymoseptoria tritici distinguish core and accessory chromosomes. Epigenetics Chromatin (2015) 0.81
Heterochromatin controls γH2A localization in Neurospora crassa. Eukaryot Cell (2014) 0.81
Neurospora importin α is required for normal heterochromatic formation and DNA methylation. PLoS Genet (2015) 0.81
Codon usage is an important determinant of gene expression levels largely through its effects on transcription. Proc Natl Acad Sci U S A (2016) 0.81
Chromosome-level genome map provides insights into diverse defense mechanisms in the medicinal fungus Ganoderma sinense. Sci Rep (2015) 0.79
Transposons passively and actively contribute to evolution of the two-speed genome of a fungal pathogen. Genome Res (2016) 0.79
The histone H3 lysine 9 methyltransferase DIM-5 modifies chromatin at frequency and represses light-activated gene expression. G3 (Bethesda) (2014) 0.78
Dual chromatin recognition by the histone deacetylase complex HCHC is required for proper DNA methylation in Neurospora crassa. Proc Natl Acad Sci U S A (2016) 0.78
Chromatin analyses of Zymoseptoria tritici: Methods for chromatin immunoprecipitation followed by high-throughput sequencing (ChIP-seq). Fungal Genet Biol (2015) 0.78
Enforcing silencing: dynamic HP1 complexes in Neurospora. Nat Struct Mol Biol (2012) 0.76
The highly expressed methionine synthase gene of Neurospora crassa is positively regulated by its proximal heterochromatic region. Nucleic Acids Res (2014) 0.76
A comprehensive resource of genomic, epigenomic and transcriptomic sequencing data for the black truffle Tuber melanosporum. Gigascience (2014) 0.76
The LSH/DDM1 Homolog MUS-30 Is Required for Genome Stability, but Not for DNA Methylation in Neurospora crassa. PLoS Genet (2016) 0.76
Histone H1 Limits DNA Methylation in Neurospora crassa. G3 (Bethesda) (2016) 0.75
Polycomb "polypacks" the chromatin. Proc Natl Acad Sci U S A (2016) 0.75
Genomics and Comparative Genomic Analyses Provide Insight into the Taxonomy and Pathogenic Potential of Novel Emmonsia Pathogens. Front Cell Infect Microbiol (2017) 0.75
Massive Expansion of Gypsy-like Retrotransposons in Microbotryum Fungi. Genome Biol Evol (2017) 0.75
Epigenetic and Posttranslational Modifications in Light Signal Transduction and the Circadian Clock in Neurospora crassa. Int J Mol Sci (2015) 0.75
An 11bp region with stem formation potential is essential for de novo DNA methylation of the RPS element. PLoS One (2013) 0.75
The Putative Histone Methyltransferase DOT1 Regulates Aflatoxin and Pathogenicity Attributes in Aspergillus flavus. Toxins (Basel) (2017) 0.75
A Matter of Scale and Dimensions: Chromatin of Chromosome Landmarks in the Fungi. Microbiol Spectr (2017) 0.75
Highly integrated single-base resolution maps of the epigenome in Arabidopsis. Cell (2008) 32.65
Genome-scale DNA methylation maps of pluripotent and differentiated cells. Nature (2008) 30.29
Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning. Nature (2008) 26.78
Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome. Nat Genet (2007) 20.22
Methylation of histone H3 lysine 9 creates a binding site for HP1 proteins. Nature (2001) 19.67
Selective recognition of methylated lysine 9 on histone H3 by the HP1 chromo domain. Nature (2001) 19.54
DNA methylation landscapes: provocative insights from epigenomics. Nat Rev Genet (2008) 15.45
Chromosome-wide and promoter-specific analyses identify sites of differential DNA methylation in normal and transformed human cells. Nat Genet (2005) 15.37
Genome-wide high-resolution mapping and functional analysis of DNA methylation in arabidopsis. Cell (2006) 15.24
Epigenetic reprogramming in mammalian development. Science (2001) 13.42
Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription. Nat Genet (2006) 11.88
Genomic imprinting: parental influence on the genome. Nat Rev Genet (2001) 11.50
Histone H3 methylation by Set2 directs deacetylation of coding regions by Rpd3S to suppress spurious intragenic transcription. Cell (2005) 10.68
Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase. Nature (2002) 9.51
Establishment and maintenance of a heterochromatin domain. Science (2002) 9.34
Suv39h-mediated histone H3 lysine 9 methylation directs DNA methylation to major satellite repeats at pericentric heterochromatin. Curr Biol (2003) 9.13
Heterochromatin revisited. Nat Rev Genet (2007) 8.70
A histone H3 methyltransferase controls DNA methylation in Neurospora crassa. Nature (2001) 8.27
Rb targets histone H3 methylation and HP1 to promoters. Nature (2001) 8.26
The SRA protein Np95 mediates epigenetic inheritance by recruiting Dnmt1 to methylated DNA. Nature (2007) 8.17
UHRF1 plays a role in maintaining DNA methylation in mammalian cells. Science (2007) 7.90
Epigenetic inheritance in plants. Nature (2007) 7.40
Chromatin immunoprecipitation and microarray-based analysis of protein location. Nat Protoc (2006) 7.29
A high-throughput gene knockout procedure for Neurospora reveals functions for multiple transcription factors. Proc Natl Acad Sci U S A (2006) 6.12
Central role of Drosophila SU(VAR)3-9 in histone H3-K9 methylation and heterochromatic gene silencing. EMBO J (2002) 5.70
Centromeric chromatin exhibits a histone modification pattern that is distinct from both euchromatin and heterochromatin. Nat Struct Mol Biol (2004) 4.95
Mobilization of transposons by a mutation abolishing full DNA methylation in Arabidopsis. Nature (2001) 4.71
Maintenance of CpG methylation is essential for epigenetic inheritance during plant gametogenesis. Nat Genet (2003) 4.70
Comprehensive analysis of heterochromatin- and RNAi-mediated epigenetic control of the fission yeast genome. Nat Genet (2005) 4.66
Trimethylated lysine 9 of histone H3 is a mark for DNA methylation in Neurospora crassa. Nat Genet (2003) 4.56
HP1 and the dynamics of heterochromatin maintenance. Nat Rev Mol Cell Biol (2004) 4.38
Functional mammalian homologues of the Drosophila PEV-modifier Su(var)3-9 encode centromere-associated proteins which complex with the heterochromatin component M31. EMBO J (1999) 4.34
Covalent modifications of histones during development and disease pathogenesis. Nat Struct Mol Biol (2007) 4.17
Dosage compensation in mammals: fine-tuning the expression of the X chromosome. Genes Dev (2006) 4.17
ChIPOTle: a user-friendly tool for the analysis of ChIP-chip data. Genome Biol (2005) 3.83
The SRA methyl-cytosine-binding domain links DNA and histone methylation. Curr Biol (2007) 3.70
Lessons from the genome sequence of Neurospora crassa: tracing the path from genomic blueprint to multicellular organism. Microbiol Mol Biol Rev (2004) 3.67
Methyl-CpG binding protein MBD1 couples histone H3 methylation at lysine 9 by SETDB1 to DNA replication and chromatin assembly. Mol Cell (2004) 3.60
Genomic patterns of DNA methylation: targets and function of an epigenetic mark. Curr Opin Cell Biol (2007) 3.54
Dual histone H3 methylation marks at lysines 9 and 27 required for interaction with CHROMOMETHYLASE3. EMBO J (2004) 3.51
RIP: the evolutionary cost of genome defense. Trends Genet (2004) 3.13
Comparison of sample preparation methods for ChIP-chip assays. Biotechniques (2006) 2.89
Roles of the Clr4 methyltransferase complex in nucleation, spreading and maintenance of heterochromatin. Nat Struct Mol Biol (2008) 2.87
Heterochromatin and RNAi are required to establish CENP-A chromatin at centromeres. Science (2008) 2.45
Chromosomal inheritance of epigenetic states in fission yeast during mitosis and meiosis. Cell (1996) 2.31
High- and low-mobility populations of HP1 in heterochromatin of mammalian cells. Mol Biol Cell (2004) 2.29
DNA methylation inhibits elongation but not initiation of transcription in Neurospora crassa. Genes Dev (1997) 2.16
The methylated component of the Neurospora crassa genome. Nature (2003) 2.16
Building the centromere: from foundation proteins to 3D organization. Trends Cell Biol (2004) 2.15
HP1 is essential for DNA methylation in neurospora. Mol Cell (2004) 2.08
Dynamic nucleosomes. Chromosome Res (2006) 1.93
Abnormal chromosome behavior in Neurospora mutants defective in DNA methylation. Science (1993) 1.92
dim-2 encodes a DNA methyltransferase responsible for all known cytosine methylation in Neurospora. EMBO J (2001) 1.91
Dense nonsymmetrical DNA methylation resulting from repeat-induced point mutation in Neurospora. Science (1993) 1.83
Epigenetic regulation of heterochromatic DNA stability. Curr Opin Genet Dev (2008) 1.80
Methyl-CpG binding domain 1 (MBD1) interacts with the Suv39h1-HP1 heterochromatic complex for DNA methylation-based transcriptional repression. J Biol Chem (2003) 1.71
DNA methylation is independent of RNA interference in Neurospora. Science (2004) 1.66
Trichostatin A causes selective loss of DNA methylation in Neurospora. Proc Natl Acad Sci U S A (1998) 1.66
Direct interaction between DNA methyltransferase DIM-2 and HP1 is required for DNA methylation in Neurospora crassa. Mol Cell Biol (2008) 1.58
Long-range silencing and position effects at telomeres and centromeres: parallels and differences. Cell Mol Life Sci (2003) 1.48
Signal for DNA methylation associated with tandem duplication in Neurospora crassa. Mol Cell Biol (1987) 1.48
Drosophila STAT is required for directly maintaining HP1 localization and heterochromatin stability. Nat Cell Biol (2008) 1.47
Development of Arabidopsis whole-genome microarrays and their application to the discovery of binding sites for the TGA2 transcription factor in salicylic acid-treated plants. Plant J (2006) 1.47
Synthesis of signals for de novo DNA methylation in Neurospora crassa. Mol Cell Biol (2003) 1.35
DNA methylation associated with repeat-induced point mutation in Neurospora crassa. Mol Cell Biol (1995) 1.34
Methylation of histone H3 lysine 36 is required for normal development in Neurospora crassa. Eukaryot Cell (2005) 1.29
Cytosine methylation associated with repeat-induced point mutation causes epigenetic gene silencing in Neurospora crassa. Genetics (1997) 1.29
A methylated Neurospora 5S rRNA pseudogene contains a transposable element inactivated by repeat-induced point mutation. Genetics (1998) 1.27
In vivo dynamics of Swi6 in yeast: evidence for a stochastic model of heterochromatin. Mol Cell Biol (2004) 1.26
Small interfering RNAs that trigger posttranscriptional gene silencing are not required for the histone H3 Lys9 methylation necessary for transgenic tandem repeat stabilization in Neurospora crassa. Mol Cell Biol (2005) 1.17
Short TpA-rich segments of the zeta-eta region induce DNA methylation in Neurospora crassa. J Mol Biol (2000) 1.10
Cloning and characterization of centromeric DNA from Neurospora crassa. Mol Cell Biol (1994) 1.05
Characterization of chromosome ends in the filamentous fungus Neurospora crassa. Genetics (2008) 1.00
Induction and maintenance of nonsymmetrical DNA methylation in Neurospora. Proc Natl Acad Sci U S A (2002) 0.98
Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome. Nat Genet (2007) 20.22
Chromosome-wide and promoter-specific analyses identify sites of differential DNA methylation in normal and transformed human cells. Nat Genet (2005) 15.37
Rapid SNP discovery and genetic mapping using sequenced RAD markers. PLoS One (2008) 13.64
The genome sequence of the filamentous fungus Neurospora crassa. Nature (2003) 11.39
DNA-binding factors shape the mouse methylome at distal regulatory regions. Nature (2011) 8.75
Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae. Nature (2005) 7.74
Lineage-specific polycomb targets and de novo DNA methylation define restriction and potential of neuronal progenitors. Mol Cell (2008) 7.68
A nomenclature for restriction enzymes, DNA methyltransferases, homing endonucleases and their genes. Nucleic Acids Res (2003) 7.56
Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium. Nature (2010) 5.79
Trimethylated lysine 9 of histone H3 is a mark for DNA methylation in Neurospora crassa. Nat Genet (2003) 4.56
Global reorganization of replication domains during embryonic stem cell differentiation. PLoS Biol (2008) 4.50
Structural basis for the product specificity of histone lysine methyltransferases. Mol Cell (2003) 4.42
Targets and dynamics of promoter DNA methylation during early mouse development. Nat Genet (2010) 4.27
Identification of genetic elements that autonomously determine DNA methylation states. Nat Genet (2011) 4.04
MicroRNAs control de novo DNA methylation through regulation of transcriptional repressors in mouse embryonic stem cells. Nat Struct Mol Biol (2008) 3.98
Lessons from the genome sequence of Neurospora crassa: tracing the path from genomic blueprint to multicellular organism. Microbiol Mol Biol Rev (2004) 3.67
Characterizing light-regulated retinal microRNAs reveals rapid turnover as a common property of neuronal microRNAs. Cell (2010) 3.57
Genomic patterns of DNA methylation: targets and function of an epigenetic mark. Curr Opin Cell Biol (2007) 3.54
BLUEPRINT to decode the epigenetic signature written in blood. Nat Biotechnol (2012) 3.24
MARCH-V is a novel mitofusin 2- and Drp1-binding protein able to change mitochondrial morphology. EMBO Rep (2006) 3.19
Determinants and dynamics of genome accessibility. Nat Rev Genet (2011) 3.15
RIP: the evolutionary cost of genome defense. Trends Genet (2004) 3.13
A complex chromatin landscape revealed by patterns of nuclease sensitivity and histone modification within the mouse beta-globin locus. Mol Cell Biol (2003) 3.09
Repressive and active histone methylation mark distinct promoters in human and mouse spermatozoa. Nat Struct Mol Biol (2010) 3.07
Structure of the Neurospora SET domain protein DIM-5, a histone H3 lysine methyltransferase. Cell (2002) 2.94
In vitro and in vivo analyses of a Phe/Tyr switch controlling product specificity of histone lysine methyltransferases. J Biol Chem (2004) 2.86
PcG proteins, DNA methylation, and gene repression by chromatin looping. PLoS Biol (2008) 2.85
DNA methylation in ES cells requires the lysine methyltransferase G9a but not its catalytic activity. EMBO J (2008) 2.81
GFP as a tool to analyze the organization, dynamics and function of nuclei and microtubules in Neurospora crassa. Fungal Genet Biol (2004) 2.80
De novo assembly of a 40 Mb eukaryotic genome from short sequence reads: Sordaria macrospora, a model organism for fungal morphogenesis. PLoS Genet (2010) 2.77
DNA replication-timing analysis of human chromosome 22 at high resolution and different developmental states. Proc Natl Acad Sci U S A (2004) 2.66
Genetics and epigenetics: stability and plasticity during cellular differentiation. Trends Genet (2009) 2.57
EJC-independent degradation of nonsense immunoglobulin-mu mRNA depends on 3' UTR length. Nat Struct Mol Biol (2006) 2.39
The genome of Nectria haematococca: contribution of supernumerary chromosomes to gene expansion. PLoS Genet (2009) 2.29
Variant histone H3.3 is deposited at sites of nucleosomal displacement throughout transcribed genes while active histone modifications show a promoter-proximal bias. Genes Dev (2005) 2.26
Diverse pathways generate microRNA-like RNAs and Dicer-independent small interfering RNAs in fungi. Mol Cell (2010) 2.23
Inhibition of DNA methylation and reactivation of silenced genes by zebularine. J Natl Cancer Inst (2003) 2.22
Localized H3K36 methylation states define histone H4K16 acetylation during transcriptional elongation in Drosophila. EMBO J (2007) 2.19
Methylated DNA immunoprecipitation (MeDIP). Methods Mol Biol (2009) 2.17
The methylated component of the Neurospora crassa genome. Nature (2003) 2.16
Chromatin state marks cell-type- and gender-specific replication of the Drosophila genome. Genes Dev (2009) 2.08
HP1 is essential for DNA methylation in neurospora. Mol Cell (2004) 2.08
Genome-wide high throughput analysis of DNA methylation in eukaryotes. Methods (2008) 2.07
Tackling the epigenome: challenges and opportunities for collaboration. Nat Biotechnol (2010) 2.04
A question of timing: emerging links between transcription and replication. Curr Opin Genet Dev (2006) 2.00
New insights into the biology and origin of mature aggressive B-cell lymphomas by combined epigenomic, genomic, and transcriptional profiling. Blood (2008) 1.97
Genomic prevalence of heterochromatic H3K9me2 and transcription do not discriminate pluripotent from terminally differentiated cells. PLoS Genet (2011) 1.97
A cytosine methyltransferase homologue is essential for repeat-induced point mutation in Neurospora crassa. Proc Natl Acad Sci U S A (2002) 1.88
Genome resequencing reveals multiscale geographic structure and extensive linkage disequilibrium in the forest tree Populus trichocarpa. New Phytol (2012) 1.88
Sox4 is a master regulator of epithelial-mesenchymal transition by controlling Ezh2 expression and epigenetic reprogramming. Cancer Cell (2013) 1.85
Methylation-dependent and -independent genomic targeting principles of the MBD protein family. Cell (2013) 1.79
High-density detection of restriction-site-associated DNA markers for rapid mapping of mutated loci in Neurospora. Genetics (2007) 1.78
Protein phosphatase PP1 is required for normal DNA methylation in Neurospora. Genes Dev (2008) 1.76
Deciphering the cryptic genome: genome-wide analyses of the rice pathogen Fusarium fujikuroi reveal complex regulation of secondary metabolism and novel metabolites. PLoS Pathog (2013) 1.72
DNA methylation is independent of RNA interference in Neurospora. Science (2004) 1.66
Direct interaction between DNA methyltransferase DIM-2 and HP1 is required for DNA methylation in Neurospora crassa. Mol Cell Biol (2008) 1.58
Accessibility of the Drosophila genome discriminates PcG repression, H4K16 acetylation and replication timing. Nat Struct Mol Biol (2010) 1.57
DNA methylation density influences the stability of an epigenetic imprint and Dnmt3a/b-independent de novo methylation. Mol Cell Biol (2002) 1.57
Molecular determinants of nucleosome retention at CpG-rich sequences in mouse spermatozoa. Nat Struct Mol Biol (2013) 1.54
Modeling of epigenome dynamics identifies transcription factors that mediate Polycomb targeting. Genome Res (2012) 1.54
Transcription factors in light and circadian clock signaling networks revealed by genomewide mapping of direct targets for neurospora white collar complex. Eukaryot Cell (2010) 1.52
ChIPs of the beta-globin locus: unraveling gene regulation within an active domain. Curr Opin Genet Dev (2002) 1.45
Epigenomics: mapping the methylome. Cell Cycle (2006) 1.42
Methylation of histones: playing memory with DNA. Curr Opin Cell Biol (2005) 1.40
Controlling DNA methylation: many roads to one modification. Curr Opin Genet Dev (2005) 1.40
Synthesis of signals for de novo DNA methylation in Neurospora crassa. Mol Cell Biol (2003) 1.35
A chromatin-modifying function of JNK during stem cell differentiation. Nat Genet (2011) 1.31
DNA methylation is required for the control of stem cell differentiation in the small intestine. Genes Dev (2014) 1.31
Tools for fungal proteomics: multifunctional neurospora vectors for gene replacement, protein expression and protein purification. Genetics (2009) 1.31
Methylation of histone H3 lysine 36 is required for normal development in Neurospora crassa. Eukaryot Cell (2005) 1.29
Transcription-coupled methylation of histone H3 at lysine 36 regulates dosage compensation by enhancing recruitment of the MSL complex in Drosophila melanogaster. Mol Cell Biol (2008) 1.28
Identification of active regulatory regions from DNA methylation data. Nucleic Acids Res (2013) 1.26
Transcriptional silencing of nonsense codon-containing immunoglobulin minigenes. Mol Cell (2005) 1.24
Cytoplasmic bulk flow propels nuclei in mature hyphae of Neurospora crassa. Eukaryot Cell (2009) 1.23
The putative protein methyltransferase LAE1 controls cellulase gene expression in Trichoderma reesei. Mol Microbiol (2012) 1.22
DNA methylation and normal chromosome behavior in Neurospora depend on five components of a histone methyltransferase complex, DCDC. PLoS Genet (2010) 1.21
Architecture and development of the Neurospora crassa hypha -- a model cell for polarized growth. Fungal Biol (2011) 1.20
The common ancestral core of vertebrate and fungal telomerase RNAs. Nucleic Acids Res (2012) 1.18
Comparative genomics of a plant-pathogenic fungus, Pyrenophora tritici-repentis, reveals transduplication and the impact of repeat elements on pathogenicity and population divergence. G3 (Bethesda) (2013) 1.18
Heterochromatin is required for normal distribution of Neurospora crassa CenH3. Mol Cell Biol (2011) 1.18
Structure and distribution of organelles and cellular location of calcium transporters in Neurospora crassa. Eukaryot Cell (2009) 1.16
CHD1 remodels chromatin and influences transient DNA methylation at the clock gene frequency. PLoS Genet (2011) 1.16
Genes related to ion-transport and energy production are upregulated in response to CO2-driven pH decrease in corals: new insights from transcriptome analysis. PLoS One (2013) 1.15
Corona is required for higher-order assembly of transverse filaments into full-length synaptonemal complex in Drosophila oocytes. PLoS Genet (2008) 1.12
Heterochromatin protein 1 (HP1) modulates replication timing of the Drosophila genome. Genome Res (2010) 1.12
The Fusarium graminearum histone H3 K27 methyltransferase KMT6 regulates development and expression of secondary metabolite gene clusters. PLoS Genet (2013) 1.11
Chromatin measurements reveal contributions of synthesis and decay to steady-state mRNA levels. Mol Syst Biol (2012) 1.10
Dynamic DNA cytosine methylation in the Populus trichocarpa genome: tissue-level variation and relationship to gene expression. BMC Genomics (2012) 1.10
Non-genotoxic carcinogen exposure induces defined changes in the 5-hydroxymethylome. Genome Biol (2012) 1.09