A G-rich sequence within the c-kit oncogene promoter forms a parallel G-quadruplex having asymmetric G-tetrad dynamics.

PubWeight™: 1.40‹?› | Rank: Top 5%

🔗 View Article (PMC 3055164)

Published in J Am Chem Soc on September 23, 2009

Authors

Shang-Te Danny Hsu1, Peter Varnai, Anthony Bugaut, Anthony P Reszka, Stephen Neidle, Shankar Balasubramanian

Author Affiliations

1: University Chemical Laboratory, University of Cambridge, Lensfield Road, Cambridge, CB2 1EW, United Kingdom.

Articles citing this

Targeting G-quadruplexes in gene promoters: a novel anticancer strategy? Nat Rev Drug Discov (2011) 3.54

DNA secondary structures: stability and function of G-quadruplex structures. Nat Rev Genet (2012) 3.15

Making sense of G-quadruplex and i-motif functions in oncogene promoters. FEBS J (2010) 1.73

Targeting MYC Expression through G-Quadruplexes. Genes Cancer (2010) 1.29

Small-molecule-mediated G-quadruplex isolation from human cells. Nat Chem (2010) 1.26

A non-canonical DNA structure is a binding motif for the transcription factor SP1 in vitro. Nucleic Acids Res (2011) 1.12

Molecular cloning of the human platelet-derived growth factor receptor beta (PDGFR-beta) promoter and drug targeting of the G-quadruplex-forming region to repress PDGFR-beta expression. Biochemistry (2010) 1.06

Solution structures of all parallel-stranded monomeric and dimeric G-quadruplex scaffolds of the human c-kit2 promoter. Nucleic Acids Res (2010) 1.04

Explaining the varied glycosidic conformational, G-tract length and sequence preferences for anti-parallel G-quadruplexes. Nucleic Acids Res (2011) 1.02

Insight into G-DNA structural polymorphism and folding from sequence and loop connectivity through free energy analysis. J Am Chem Soc (2011) 0.94

Targeting the c-Kit Promoter G-quadruplexes with 6-Substituted Indenoisoquinolines. ACS Med Chem Lett (2010) 0.93

The major G-quadruplex formed in the human BCL-2 proximal promoter adopts a parallel structure with a 13-nt loop in K+ solution. J Am Chem Soc (2014) 0.90

Polymorphism and resolution of oncogene promoter quadruplex-forming sequences. Org Biomol Chem (2011) 0.85

Sequence, stability, and structure of G-quadruplexes and their interactions with drugs. Curr Protoc Nucleic Acid Chem (2012) 0.85

Targeting DNA G-quadruplex structures with peptide nucleic acids. Curr Pharm Des (2012) 0.84

Mapping the sequences of potential guanine quadruplex motifs. Nucleic Acids Res (2011) 0.84

Structural basis of sodium-potassium exchange of a human telomeric DNA quadruplex without topological conversion. Nucleic Acids Res (2014) 0.84

Not all G-quadruplexes are created equally: an investigation of the structural polymorphism of the c-Myc G-quadruplex-forming sequence and its interaction with the porphyrin TMPyP4. Org Biomol Chem (2012) 0.82

Inhibition of cancer cell migration and invasion through suppressing the Wnt1-mediating signal pathway by G-quadruplex structure stabilizers. J Biol Chem (2014) 0.81

Quadruplex formation is necessary for stable PNA invasion into duplex DNA of BCL2 promoter region. Nucleic Acids Res (2011) 0.81

Flexibility and structural conservation in a c-KIT G-quadruplex. Nucleic Acids Res (2014) 0.79

Calculation of hydrodynamic properties for G-quadruplex nucleic acid structures from in silico bead models. Top Curr Chem (2013) 0.79

Molecular dynamics simulations reveal the balance of forces governing the formation of a guanine tetrad-a common structural unit of G-quadruplex DNA. Nucleic Acids Res (2016) 0.78

Sequencing and G-quadruplex folding of the canine proto-oncogene KIT promoter region: might dog be used as a model for human disease? PLoS One (2014) 0.78

G-register exchange dynamics in guanine quadruplexes. Nucleic Acids Res (2016) 0.78

Resolution of quadruplex polymorphism by size-exclusion chromatography. Curr Protoc Nucleic Acid Chem (2011) 0.77

Induction of senescence in cancer cells by the G-quadruplex stabilizer, BMVC4, is independent of its telomerase inhibitory activity. Br J Pharmacol (2012) 0.77

General cell-binding activity of intramolecular G-quadruplexes with parallel structure. PLoS One (2013) 0.77

Aptamer selection based on G4-forming promoter region. PLoS One (2013) 0.76

Possible regulatory roles of promoter g-quadruplexes in cardiac function-related genes - human TnIc as a model. PLoS One (2013) 0.76

A new application of click chemistry in situ: development of fluorescent probe for specific G-quadruplex topology. Sci Rep (2015) 0.76

Classification of g-quadruplex DNA on the basis of the quadruplex twist angle and planarity of g-quartets. Acta Naturae (2010) 0.76

Ensemble and single molecule FRET analysis of the structure and unfolding kinetics of the c-kit promoter quadruplexes. Chem Commun (Camb) (2009) 0.76

Screening of candidate G-quadruplex ligands for the human c-KIT promotorial region and their effects in multiple in-vitro models. Oncotarget (2016) 0.75

A novel transition pathway of ligand-induced topological conversion from hybrid forms to parallel forms of human telomeric G-quadruplexes. Nucleic Acids Res (2016) 0.75

KIT over-expression by p55PIK-PI3K leads to Imatinib-resistance in patients with gastrointestinal stromal tumors. Oncotarget (2016) 0.75

Variable-temperature size exclusion chromatography for the study of the structural changes in g-quadruplex. ISRN Biochem (2013) 0.75

Co-existence of distinct supramolecular assemblies in solution and in the solid state. Chemistry (2016) 0.75

Loop flexibility in human telomeric quadruplex small-molecule complexes. Nucleic Acids Res (2015) 0.75

Separation of Quadruplex Polymorphism in DNA Sequences by Reversed-Phase Chromatography. Curr Protoc Nucleic Acid Chem (2015) 0.75

Downregulation of oncogenic RAS and c-Myc expression in MOLT-4 leukaemia cells by a salicylaldehyde semicarbazone copper(II) complex. Sci Rep (2016) 0.75

A core extended naphtalene diimide G-quadruplex ligand potently inhibits herpes simplex virus 1 replication. Sci Rep (2017) 0.75

RNA G-quadruplexes in biology: Principles and molecular mechanisms. J Mol Biol (2017) 0.75

Articles cited by this

Kinase mutations and imatinib response in patients with metastatic gastrointestinal stromal tumor. J Clin Oncol (2003) 11.33

Direct evidence for a G-quadruplex in a promoter region and its targeting with a small molecule to repress c-MYC transcription. Proc Natl Acad Sci U S A (2002) 9.60

Crystal structure of parallel quadruplexes from human telomeric DNA. Nature (2002) 8.90

Refinement of the AMBER force field for nucleic acids: improving the description of alpha/gamma conformers. Biophys J (2007) 7.99

Prevalence of quadruplexes in the human genome. Nucleic Acids Res (2005) 7.79

Human proto-oncogene c-kit: a new cell surface receptor tyrosine kinase for an unidentified ligand. EMBO J (1987) 7.32

Quadruplex DNA: sequence, topology and structure. Nucleic Acids Res (2006) 6.42

Molecular correlates of imatinib resistance in gastrointestinal stromal tumors. J Clin Oncol (2006) 6.00

G-quadruplexes in promoters throughout the human genome. Nucleic Acids Res (2006) 5.84

Highly prevalent putative quadruplex sequence motifs in human DNA. Nucleic Acids Res (2005) 5.34

Quadruplex structure of Oxytricha telomeric DNA oligonucleotides. Nature (1992) 4.24

G-quartets 40 years later: from 5'-GMP to molecular biology and supramolecular chemistry. Angew Chem Int Ed Engl (2004) 4.20

DNA tetraplex formation in the control region of c-myc. Nucleic Acids Res (1998) 4.09

The functional response of upstream DNA to dynamic supercoiling in vivo. Nat Struct Mol Biol (2008) 3.90

Structural basis for the autoinhibition and STI-571 inhibition of c-Kit tyrosine kinase. J Biol Chem (2004) 3.79

Propeller-type parallel-stranded G-quadruplexes in the human c-myc promoter. J Am Chem Soc (2004) 3.74

Human telomere, oncogenic promoter and 5'-UTR G-quadruplexes: diverse higher order DNA and RNA targets for cancer therapeutics. Nucleic Acids Res (2007) 3.49

Solution structure of the biologically relevant G-quadruplex element in the human c-MYC promoter. Implications for G-quadruplex stabilization. Biochemistry (2005) 3.41

STI571 inactivation of the gastrointestinal stromal tumor c-KIT oncoprotein: biological and clinical implications. Oncogene (2001) 3.36

Putative DNA quadruplex formation within the human c-kit oncogene. J Am Chem Soc (2005) 3.28

Structure of the human telomere in K+ solution: an intramolecular (3 + 1) G-quadruplex scaffold. J Am Chem Soc (2006) 3.26

Loop-length-dependent folding of G-quadruplexes. J Am Chem Soc (2004) 3.16

An intramolecular G-quadruplex structure with mixed parallel/antiparallel G-strands formed in the human BCL-2 promoter region in solution. J Am Chem Soc (2006) 2.91

Heterogeneity of kinase inhibitor resistance mechanisms in GIST. J Pathol (2008) 2.85

Studies on the structure and dynamics of the human telomeric G quadruplex by single-molecule fluorescence resonance energy transfer. Proc Natl Acad Sci U S A (2003) 2.82

Stability and kinetics of G-quadruplex structures. Nucleic Acids Res (2008) 2.75

Extreme conformational diversity in human telomeric DNA. Proc Natl Acad Sci U S A (2005) 2.63

A conserved quadruplex motif located in a transcription activation site of the human c-kit oncogene. Biochemistry (2006) 2.62

Not so crystal clear: the structure of the human telomere G-quadruplex in solution differs from that present in a crystal. Nucleic Acids Res (2005) 2.57

SOFAST-HMQC experiments for recording two-dimensional heteronuclear correlation spectra of proteins within a few seconds. J Biomol NMR (2005) 2.53

Two-repeat human telomeric d(TAGGGTTAGGGT) sequence forms interconverting parallel and antiparallel G-quadruplexes in solution: distinct topologies, thermodynamic properties, and folding/unfolding kinetics. J Am Chem Soc (2003) 2.52

Hydrogen exchange methods to study protein folding. Methods (2004) 2.47

Structures, folding patterns, and functions of intramolecular DNA G-quadruplexes found in eukaryotic promoter regions. Biochimie (2008) 2.38

Hydrogen exchange at equilibrium: a short cut for analysing protein-folding pathways? Trends Biochem Sci (1997) 2.36

Structure of an unprecedented G-quadruplex scaffold in the human c-kit promoter. J Am Chem Soc (2007) 2.26

Structure of two intramolecular G-quadruplexes formed by natural human telomere sequences in K+ solution. Nucleic Acids Res (2007) 2.09

NMR solution structure of the major G-quadruplex structure formed in the human BCL2 promoter region. Nucleic Acids Res (2006) 2.03

The importance of negative superhelicity in inducing the formation of G-quadruplex and i-motif structures in the c-Myc promoter: implications for drug targeting and control of gene expression. J Med Chem (2009) 2.03

The structures of quadruplex nucleic acids and their drug complexes. Curr Opin Struct Biol (2009) 2.01

Different loop arrangements of intramolecular human telomeric (3+1) G-quadruplexes in K+ solution. Nucleic Acids Res (2006) 1.98

Trisubstituted isoalloxazines as a new class of G-quadruplex binding ligands: small molecule regulation of c-kit oncogene expression. J Am Chem Soc (2007) 1.87

Structure and regulation of Kit protein-tyrosine kinase--the stem cell factor receptor. Biochem Biophys Res Commun (2005) 1.85

A site-specific low-enrichment (15)N,(13)C isotope-labeling approach to unambiguous NMR spectral assignments in nucleic acids. J Am Chem Soc (2002) 1.77

A sequence-independent study of the influence of short loop lengths on the stability and topology of intramolecular DNA G-quadruplexes. Biochemistry (2007) 1.75

An interlocked dimeric parallel-stranded DNA quadruplex: a potent inhibitor of HIV-1 integrase. Proc Natl Acad Sci U S A (2005) 1.71

Protein folding and misfolding: mechanism and principles. Q Rev Biophys (2008) 1.68

Genome-wide computational and expression analyses reveal G-quadruplex DNA motifs as conserved cis-regulatory elements in human and related species. J Med Chem (2008) 1.64

Kinetics of unfolding the human telomeric DNA quadruplex using a PNA trap. J Am Chem Soc (2003) 1.51

(3 + 1) Assembly of three human telomeric repeats into an asymmetric dimeric G-quadruplex. J Am Chem Soc (2005) 1.51

Drug targeting of the c-MYC promoter to repress gene expression via a G-quadruplex silencer element. Semin Oncol (2006) 1.39

Solution structure of a parallel-stranded G-quadruplex DNA. J Mol Biol (1993) 1.31

Single-molecule conformational analysis of G-quadruplex formation in the promoter DNA duplex of the proto-oncogene c-kit. J Am Chem Soc (2007) 1.25

Sequence occurrence and structural uniqueness of a G-quadruplex in the human c-kit promoter. Nucleic Acids Res (2007) 1.24

Genetic aberrations of gastrointestinal stromal tumors. Cancer (2008) 1.18

Targeting human gastrointestinal stromal tumor cells with a quadruplex-binding small molecule. J Med Chem (2009) 1.15

Sequence effects of single base loops in intramolecular quadruplex DNA. FEBS Lett (2007) 1.11

Beyond imatinib: second generation c-KIT inhibitors for the management of gastrointestinal stromal tumors. Clin Colorectal Cancer (2006) 1.10

Structure of a human telomeric DNA sequence stabilized by 8-bromoguanosine substitutions, as determined by NMR in a K+ solution. FEBS J (2007) 1.08

Topology conservation and loop flexibility in quadruplex-drug recognition: crystal structures of inter- and intramolecular telomeric DNA quadruplex-drug complexes. J Mol Biol (2008) 1.08

Characterization of the promoter region of the human c-kit proto-oncogene. Jpn J Cancer Res (1993) 1.08

Sunitinib: a novel tyrosine kinase inhibitor. A brief review of its therapeutic potential in the treatment of renal carcinoma and gastrointestinal stromal tumors (GIST). Ther Clin Risk Manag (2007) 1.07

Opening mechanism of G.T/U pairs in DNA and RNA duplexes: a combined study of imino proton exchange and molecular dynamics simulation. J Am Chem Soc (2004) 1.06

The relationship of potential G-quadruplex sequences in cis-upstream regions of the human genome to SP1-binding elements. Nucleic Acids Res (2008) 1.06

Thermodynamics and kinetics for base-pair opening in the P1 duplex of the Tetrahymena group I ribozyme. Nucleic Acids Res (2007) 1.03

Four-stranded DNA: cancer, gene regulation and drug development. Philos Trans A Math Phys Eng Sci (2007) 1.01

Kinetics of double-chain reversals bridging contiguous quartets in tetramolecular quadruplexes. Nucleic Acids Res (2006) 0.96

KIT oncoprotein interactions in gastrointestinal stromal tumors: therapeutic relevance. Oncogene (2007) 0.95

Diarylethynyl amides that recognize the parallel conformation of genomic promoter DNA G-quadruplexes. J Am Chem Soc (2008) 0.94

Selectivity in ligand recognition of G-quadruplex loops. Biochemistry (2009) 0.94

Topology variation and loop structural homology in crystal and simulated structures of a bimolecular DNA quadruplex. J Am Chem Soc (2006) 0.93

Probing the role of hydrogen bonds in the stability of base pairs in double-helical DNA. Biopolymers (2007) 0.92

Inhibition of myc promoter and telomerase activity and induction of delayed apoptosis by SYUIQ-5, a novel G-quadruplex interactive agent in leukemia cells. Leukemia (2007) 0.90

Possibility of an antiparallel (tetramer) quadruplex exhibited by the double repeat of the human telomere. Biochemistry (2007) 0.87

Clinical implications of mutational analysis in gastrointestinal stromal tumours. Br J Cancer (2008) 0.87

Site-resolved stabilization of a DNA triple helix by magnesium ions. Nucleic Acids Res (2004) 0.84

NMR study of slowly exchanging imino protons in yeast tRNAasp. Proc Natl Acad Sci U S A (1983) 0.81

Articles by these authors

Accurate whole human genome sequencing using reversible terminator chemistry. Nature (2008) 90.20

Crystal structure of parallel quadruplexes from human telomeric DNA. Nature (2002) 8.90

Prevalence of quadruplexes in the human genome. Nucleic Acids Res (2005) 7.79

Quadruplex DNA: sequence, topology and structure. Nucleic Acids Res (2006) 6.42

G-quadruplexes in promoters throughout the human genome. Nucleic Acids Res (2006) 5.84

Highly prevalent putative quadruplex sequence motifs in human DNA. Nucleic Acids Res (2005) 5.34

Quantitative sequencing of 5-methylcytosine and 5-hydroxymethylcytosine at single-base resolution. Science (2012) 5.17

Quantitative visualization of DNA G-quadruplex structures in human cells. Nat Chem (2013) 4.61

An RNA G-quadruplex in the 5' UTR of the NRAS proto-oncogene modulates translation. Nat Chem Biol (2007) 4.11

Targeting G-quadruplexes in gene promoters: a novel anticancer strategy? Nat Rev Drug Discov (2011) 3.54

Putative DNA quadruplex formation within the human c-kit oncogene. J Am Chem Soc (2005) 3.28

Loop-length-dependent folding of G-quadruplexes. J Am Chem Soc (2004) 3.16

Studies on the structure and dynamics of the human telomeric G quadruplex by single-molecule fluorescence resonance energy transfer. Proc Natl Acad Sci U S A (2003) 2.82

LIN-28 and the poly(U) polymerase PUP-2 regulate let-7 microRNA processing in Caenorhabditis elegans. Nat Struct Mol Biol (2009) 2.79

A conserved quadruplex motif located in a transcription activation site of the human c-kit oncogene. Biochemistry (2006) 2.62

Dual regulation of TRPV1 by phosphoinositides. J Neurosci (2007) 2.48

Small-molecule-induced DNA damage identifies alternative DNA structures in human genes. Nat Chem Biol (2012) 2.41

5'-UTR RNA G-quadruplexes: translation regulation and targeting. Nucleic Acids Res (2012) 2.36

Crystal structure of the potassium form of an Oxytricha nova G-quadruplex. J Mol Biol (2002) 2.29

Structure of an unprecedented G-quadruplex scaffold in the human c-kit promoter. J Am Chem Soc (2007) 2.26

G-quadruplexes: the beginning and end of UTRs. Nucleic Acids Res (2008) 2.18

Active Arf6 recruits ARNO/cytohesin GEFs to the PM by binding their PH domains. Mol Biol Cell (2007) 2.15

Genome-wide distribution of 5-formylcytosine in embryonic stem cells is associated with transcription and depends on thymine DNA glycosylase. Genome Biol (2012) 1.94

FANCJ is a structure-specific DNA helicase associated with the maintenance of genomic G/C tracts. J Biol Chem (2008) 1.93

A novel small molecule that alters shelterin integrity and triggers a DNA-damage response at telomeres. J Am Chem Soc (2008) 1.91

Template-assisted fabrication of salt-independent catalytic tubular microengines. ACS Nano (2010) 1.90

Activation of STIM1-Orai1 involves an intramolecular switching mechanism. Sci Signal (2010) 1.89

Trisubstituted isoalloxazines as a new class of G-quadruplex binding ligands: small molecule regulation of c-kit oncogene expression. J Am Chem Soc (2007) 1.87

The G-quadruplex-interactive molecule BRACO-19 inhibits tumor growth, consistent with telomere targeting and interference with telomerase function. Cancer Res (2005) 1.84

The transcription factor FOXM1 is a cellular target of the natural product thiostrepton. Nat Chem (2011) 1.82

Maintenance of hormone-sensitive phosphoinositide pools in the plasma membrane requires phosphatidylinositol 4-kinase IIIalpha. Mol Biol Cell (2007) 1.77

A sequence-independent study of the influence of short loop lengths on the stability and topology of intramolecular DNA G-quadruplexes. Biochemistry (2007) 1.75

G-quadruplex nucleic acids as therapeutic targets. Curr Opin Chem Biol (2009) 1.74

G-quadruplex structures are stable and detectable in human genomic DNA. Nat Commun (2013) 1.72

Ultrasensitive coincidence fluorescence detection of single DNA molecules. Anal Chem (2003) 1.60

Oxidative bisulfite sequencing of 5-methylcytosine and 5-hydroxymethylcytosine. Nat Protoc (2013) 1.54

c-Met must translocate to the nucleus to initiate calcium signals. J Biol Chem (2007) 1.52

Kinetics of unfolding the human telomeric DNA quadruplex using a PNA trap. J Am Chem Soc (2003) 1.51

A screen for hydroxymethylcytosine and formylcytosine binding proteins suggests functions in transcription and chromatin regulation. Genome Biol (2013) 1.50

Structure of a G-quadruplex-ligand complex. J Mol Biol (2003) 1.49

FANCJ coordinates two pathways that maintain epigenetic stability at G-quadruplex DNA. Nucleic Acids Res (2011) 1.45

A single-molecule platform for investigation of interactions between G-quadruplexes and small-molecule ligands. Nat Chem (2011) 1.43

A proton-fuelled DNA nanomachine. Angew Chem Int Ed Engl (2003) 1.42

Structural basis for binding of porphyrin to human telomeres. Biochemistry (2007) 1.37

Formation of an interlocked quadruplex dimer by d(GGGT). J Am Chem Soc (2004) 1.37

Dependence of STIM1/Orai1-mediated calcium entry on plasma membrane phosphoinositides. J Biol Chem (2009) 1.36

A G-quadruplex-interactive potent small-molecule inhibitor of telomerase exhibiting in vitro and in vivo antitumor activity. Mol Pharmacol (2002) 1.33

Structure-specific recognition of quadruplex DNA by organic cations: influence of shape, substituents and charge. Biophys Chem (2006) 1.32

Genome-wide mapping of FOXM1 binding reveals co-binding with estrogen receptor alpha in breast cancer cells. Genome Biol (2013) 1.31

Structure of the first parallel DNA quadruplex-drug complex. J Am Chem Soc (2003) 1.26

Small-molecule-mediated G-quadruplex isolation from human cells. Nat Chem (2010) 1.26

Single-molecule conformational analysis of G-quadruplex formation in the promoter DNA duplex of the proto-oncogene c-kit. J Am Chem Soc (2007) 1.25

Structural basis of DNA quadruplex recognition by an acridine drug. J Am Chem Soc (2008) 1.25

Sequence occurrence and structural uniqueness of a G-quadruplex in the human c-kit promoter. Nucleic Acids Res (2007) 1.24

Determination of the free energy landscape of alpha-synuclein using spin label nuclear magnetic resonance measurements. J Am Chem Soc (2009) 1.21

Oxazole-based peptide macrocycles: a new class of G-quadruplex binding ligands. J Am Chem Soc (2006) 1.20

Identification of a new RNA.RNA interaction site for human telomerase RNA (hTR): structural implications for hTR accumulation and a dyskeratosis congenita point mutation. Nucleic Acids Res (2003) 1.19

Thiophene-based diamidine forms a "super" at binding minor groove agent. J Am Chem Soc (2004) 1.18

Determination of the fraction and stoichiometry of femtomolar levels of biomolecular complexes in an excess of monomer using single-molecule, two-color coincidence detection. Anal Chem (2006) 1.17

A crystallographic and modelling study of a human telomeric RNA (TERRA) quadruplex. Nucleic Acids Res (2010) 1.16

G-quadruplex-specific peptide-hemicyanine ligands by partial combinatorial selection. J Am Chem Soc (2003) 1.16

Single-molecule analysis of human telomerase monomer. Nat Chem Biol (2008) 1.16

Molecular dynamics and principal components analysis of human telomeric quadruplex multimers. Biophys J (2008) 1.16

Stabilization of G-quadruplex DNA and inhibition of telomerase activity by square-planar nickel(II) complexes. J Am Chem Soc (2006) 1.15

Genome-wide analysis of a G-quadruplex-specific single-chain antibody that regulates gene expression. Nucleic Acids Res (2009) 1.15

Targeting human gastrointestinal stromal tumor cells with a quadruplex-binding small molecule. J Med Chem (2009) 1.15

Motion-based DNA detection using catalytic nanomotors. Nat Commun (2010) 1.15

Ligand-driven G-quadruplex conformational switching by using an unusual mode of interaction. Angew Chem Int Ed Engl (2007) 1.15

Rudimentary G-quadruplex-based telomere capping in Saccharomyces cerevisiae. Nat Struct Mol Biol (2011) 1.14

Out-of-shape DNA minor groove binders: induced fit interactions of heterocyclic dications with the DNA minor groove. Biochemistry (2005) 1.12

A non-canonical DNA structure is a binding motif for the transcription factor SP1 in vitro. Nucleic Acids Res (2011) 1.12

Trisubstituted acridines as G-quadruplex telomere targeting agents. Effects of extensions of the 3,6- and 9-side chains on quadruplex binding, telomerase activity, and cell proliferation. J Med Chem (2006) 1.11

Small molecule-mediated inhibition of translation by targeting a native RNA G-quadruplex. Org Biomol Chem (2010) 1.11

A G-quadruplex telomere targeting agent produces p16-associated senescence and chromosomal fusions in human prostate cancer cells. Mol Cancer Ther (2004) 1.11

An intramolecular G-quadruplex structure is required for binding of telomeric repeat-containing RNA to the telomeric protein TRF2. J Am Chem Soc (2012) 1.11

The BCL-2 5' untranslated region contains an RNA G-quadruplex-forming motif that modulates protein expression. Biochemistry (2010) 1.11

Macrocyclic and helical oligoamides as a new class of G-quadruplex ligands. J Am Chem Soc (2007) 1.10

Molecule by molecule direct and quantitative counting of antibody-protein complexes in solution. Anal Chem (2004) 1.10

A role for water molecules in DNA-ligand minor groove recognition. Acc Chem Res (2009) 1.10

Aminoacyl-anthraquinone conjugates as telomerase inhibitors: synthesis, biophysical and biological evaluation. J Med Chem (2008) 1.10

Rapid delivery of drug carriers propelled and navigated by catalytic nanoshuttles. Small (2010) 1.10

Effects of metal coordination geometry on stabilization of human telomeric quadruplex DNA by square-planar and square-pyramidal metal complexes. Inorg Chem (2008) 1.09

Synthesis and evaluation of analogues of 10H-indolo[3,2-b]quinoline as G-quadruplex stabilising ligands and potential inhibitors of the enzyme telomerase. Org Biomol Chem (2004) 1.09

Binding interactions between long noncoding RNA HOTAIR and PRC2 proteins. Biochemistry (2013) 1.09

The design of G-quadruplex ligands as telomerase inhibitors. Mini Rev Med Chem (2003) 1.08

Topology conservation and loop flexibility in quadruplex-drug recognition: crystal structures of inter- and intramolecular telomeric DNA quadruplex-drug complexes. J Mol Biol (2008) 1.08

Structural analysis of the catalytic core of human telomerase RNA by FRET and molecular modeling. Biochemistry (2006) 1.08