Transcription boundaries of U1 small nuclear RNA.

PubWeight™: 1.36‹?› | Rank: Top 10%

🔗 View Article (PMC 366960)

Published in Mol Cell Biol on September 01, 1985

Authors

G R Kunkel, T Pederson

Articles citing this

U6 small nuclear RNA is transcribed by RNA polymerase III. Proc Natl Acad Sci U S A (1986) 3.14

Genetic complementation in the Xenopus oocyte: co-expression of sea urchin histone and U7 RNAs restores 3' processing of H3 pre-mRNA in the oocyte. EMBO J (1986) 2.29

A pause site for RNA polymerase II is associated with termination of transcription. EMBO J (1991) 2.23

Elements required for transcription initiation of the human U2 snRNA gene coincide with elements required for snRNA 3' end formation. EMBO J (1988) 1.97

Nucleocytoplasmic transport and processing of small nuclear RNA precursors. Mol Cell Biol (1990) 1.96

Transcriptional termination between the closely linked human complement genes C2 and factor B: common termination factor for C2 and c-myc? EMBO J (1991) 1.88

MAZ-dependent termination between closely spaced human complement genes. EMBO J (1994) 1.76

Formation of the 3' end on U snRNAs requires at least three sequence elements. EMBO J (1986) 1.52

Characterization of the mouse beta maj globin transcription termination region: a spacing sequence is required between the poly(A) signal sequence and multiple downstream termination elements. Mol Cell Biol (1993) 1.47

In vitro synthesis of vertebrate U1 snRNA. EMBO J (1989) 1.41

Transcription of the human U2 snRNA genes continues beyond the 3' box in vivo. EMBO J (1999) 1.32

The highly conserved U small nuclear RNA 3'-end formation signal is quite tolerant to mutation. Mol Cell Biol (1987) 1.32

Initiation and termination of human U1 RNA transcription requires the concerted action of multiple flanking elements. Nucleic Acids Res (1989) 1.19

Analysis of a sea urchin gene cluster coding for the small nuclear U7 RNA, a rare RNA species implicated in the 3' editing of histone precursor mRNAs. Proc Natl Acad Sci U S A (1986) 1.15

The human U1 snRNA promoter and enhancer do not direct synthesis of messenger RNA. Nucleic Acids Res (1988) 1.13

Accurate and efficient 3' processing of U2 small nuclear RNA precursor in a fractionated cytoplasmic extract. Mol Cell Biol (1987) 1.10

Genomic study of RNA polymerase II and III SNAPc-bound promoters reveals a gene transcribed by both enzymes and a broad use of common activators. PLoS Genet (2012) 1.06

U2 small nuclear RNA 3' end formation is directed by a critical internal structure distinct from the processing site. Mol Cell Biol (1993) 1.04

The 3' ends of human pre-snRNAs are produced by RNA polymerase II CTD-dependent RNA processing. EMBO J (2003) 1.04

Synthesis of U1 RNA in isolated mouse cell nuclei: initiation and 3'-end formation. Mol Cell Biol (1987) 0.99

Direct demonstration of termination signals for RNA polymerase II from the sea urchin H2A histone gene. Nucleic Acids Res (1989) 0.91

U1 precursors: variant 3' flanking sequences are transcribed in human cells. J Cell Biol (1987) 0.87

The little elongation complex functions at initiation and elongation phases of snRNA gene transcription. Mol Cell (2013) 0.86

Articles cited by this

Efficient in vitro synthesis of biologically active RNA and RNA hybridization probes from plasmids containing a bacteriophage SP6 promoter. Nucleic Acids Res (1984) 86.56

A new pair of M13 vectors for selecting either DNA strand of double-digest restriction fragments. Gene (1982) 59.01

Organization and expression of eucaryotic split genes coding for proteins. Annu Rev Biochem (1981) 49.46

Rapid isolation of antigens from cells with a staphylococcal protein A-antibody adsorbent: parameters of the interaction of antibody-antigen complexes with protein A. J Immunol (1975) 47.77

Isolation of pure IgG1, IgG2a and IgG2b immunoglobulins from mouse serum using protein A-sepharose. Immunochemistry (1978) 22.56

Are snRNPs involved in splicing? Nature (1980) 15.47

Monoclonal antibodies to nucleic acid-containing cellular constituents: probes for molecular biology and autoimmune disease. Proc Natl Acad Sci U S A (1981) 10.72

The U1 small nuclear RNA-protein complex selectively binds a 5' splice site in vitro. Cell (1983) 9.00

A mechanism for RNA splicing. Proc Natl Acad Sci U S A (1980) 7.76

The 5' terminus of the RNA moiety of U1 small nuclear ribonucleoprotein particles is required for the splicing of messenger RNA precursors. Cell (1984) 6.25

Splicing of in vitro synthesized messenger RNA precursors in HeLa cell extracts. Cell (1983) 5.82

Small RNA species of the HeLa cell: metabolism and subcellular localization. Cell (1976) 5.27

Two promoters of different strengths control the transcription of the mouse alpha-amylase gene Amy-1a in the parotid gland and the liver. Cell (1983) 5.22

Splicing of messenger RNA precursors is inhibited by antisera to small nuclear ribonucleoprotein. Cell (1983) 4.42

RNA synthesis in isolated nuclei: in vitro initiation of adenovirus 2 major late mRNA precursor. Proc Natl Acad Sci U S A (1979) 3.75

A small nuclear ribonucleoprotein is required for splicing of adenoviral early RNA sequences. Proc Natl Acad Sci U S A (1981) 3.68

Structural organization of ribonucleoproteins containing small nuclear RNAs from HeLa cells. Proteins interact closely with a similar structural domain of U1, U2, U4 and U5 small nuclear RNAs. J Mol Biol (1982) 3.51

The definition of a large viral transcription unit late in Ad2 infection of HeLa cells: mapping of nascent RNA molecules labeled in isolated nuclei. Cell (1977) 3.32

Intracellular transport of microinjected 5S and small nuclear RNAs. Nature (1982) 3.28

Nucleotide sequences of nuclear U1A RNAs from chicken, rat and man. Nucleic Acids Res (1980) 3.13

Transcription of a gene for human U1 small nuclear RNA. Cell (1982) 2.93

Nucleocytoplasmic distribution of snRNPs and stockpiled snRNA-binding proteins during oogenesis and early development in Xenopus laevis. Cell (1983) 2.57

Human U1 loci: genes for human U1 RNA have dramatically similar genomic environments. Cell (1982) 2.51

Structure and expression of a chicken gene coding for U1 RNA. Cell (1981) 2.51

Base-pairing interactions between small nuclear RNAs and nuclear RNA precursors as revealed by psoralen cross-linking in vivo. Cell (1981) 2.49

Synthesis of human U1 RNA. II. Identification of two regions of the promoter essential for transcription initiation at position +1. J Biol Chem (1984) 2.46

Termination of transcription in the mouse alpha-amylase gene Amy-2a occurs at multiple sites downstream of the polyadenylation site. Cell (1984) 2.44

True genes for human U1 small nuclear RNA. Copy number, polymorphism, and methylation. J Biol Chem (1984) 2.35

Transcription termination occurs within a 1000 base pair region downstream from the poly(A) site of the mouse beta-globin (major) gene. Nucleic Acids Res (1984) 2.24

Structure of nuclear ribonucleoprotein: heterogeneous nuclear RNA is complexed with a major sextet of proteins in vivo. Proc Natl Acad Sci U S A (1983) 2.19

Correlation of hnRNP structure and nascent transcript cleavage. Cell (1981) 2.06

Chromatin structure and the cell cycle. Proc Natl Acad Sci U S A (1972) 1.91

Intracellular site of U1 small nuclear RNA processing and ribonucleoprotein assembly. J Cell Biol (1984) 1.81

U1 small nuclear RNA genes are located on human chromosome 1 and are expressed in mouse-human hybrid cells. Mol Cell Biol (1983) 1.76

Small nuclear ribonucleoproteins of Drosophila: identification of U1 RNA-associated proteins and their behavior during heat shock. Mol Cell Biol (1982) 1.70

Splicing pathways of SV40 mRNAs in X. laevis oocytes differ in their requirements for snRNPs. Cell (1984) 1.69

Protein binding sites are conserved in U1 small nuclear RNA from insects and mammals. Proc Natl Acad Sci U S A (1983) 1.63

Transcription of the mouse dihydrofolate reductase gene proceeds unabated through seven polyadenylation sites and terminates near a region of repeated DNA. Mol Cell Biol (1984) 1.55

Termination of the ovalbumin gene transcription. EMBO J (1984) 1.53

Small RNAs in the nucleus and cytoplasm of HeLa cells. Biochem Biophys Res Commun (1976) 1.50

Molecular cloning and characterization of a gene for rat U2 small nuclear RNA. J Mol Biol (1983) 1.47

Synthesis of low molecular weight RNA components A, C and D by polymerase II in alpha-amanitin-resistant hamster cells. Nucleic Acids Res (1979) 1.45

Precursors of U4 small nuclear RNA. J Cell Biol (1984) 1.36

Short-lived, small RNAs in the cytoplasm of HeLa cells. Cell (1974) 1.35

Splicing of Xenopus laevis ribosomal protein RNAs is inhibited in vivo by antisera to ribonucleoproteins containing U1 small nuclear RNA. J Mol Biol (1984) 1.23

Mg2+ induces a sharp and reversible transition in U1 and U2 small nuclear ribonucleoprotein configurations. Mol Cell Biol (1984) 1.21

U1 small nuclear ribonucleoprotein studied by in vitro assembly. J Cell Biol (1983) 1.16

Sensitivity of low molecular weight RNA synthesis to UV radiation. Nature (1979) 1.16

Ribonucleoprotein organization of eukaryotic RNA. XXX. Evidence that U1 small nuclear RNA is a ribonucleoprotein when base-paired with pre-messenger RNA in vivo. J Mol Biol (1984) 0.99

Sensitivity to UV radiation of small nuclear RNA synthesis in mammalian cells. Mol Cell Biol (1983) 0.94

Assembly of nuclear ribonucleoprotein particles during in vitro transcription. Proc Natl Acad Sci U S A (1982) 0.88

Articles by these authors

Nucleosomes will not form on double-stranded RNa or over poly(dA).poly(dT) tracts in recombinant DNA. Nucleic Acids Res (1981) 3.80

Intranuclear diffusion and hybridization state of oligonucleotides measured by fluorescence correlation spectroscopy in living cells. Proc Natl Acad Sci U S A (1998) 3.36

U6 small nuclear RNA is transcribed by RNA polymerase III. Proc Natl Acad Sci U S A (1986) 3.14

Proteins associated with heterogeneous nuclear RNA in eukaryotic cells. J Mol Biol (1974) 3.13

Upstream elements required for efficient transcription of a human U6 RNA gene resemble those of U1 and U2 genes even though a different polymerase is used. Genes Dev (1988) 2.55

Base-pairing interactions between small nuclear RNAs and nuclear RNA precursors as revealed by psoralen cross-linking in vivo. Cell (1981) 2.49

Structure of nuclear ribonucleoprotein: identification of proteins in contact with poly(A)+ heterogeneous nuclear RNA in living HeLa cells. J Cell Biol (1981) 2.42

Movement of nuclear poly(A) RNA throughout the interchromatin space in living cells. Curr Biol (1999) 2.20

Structure of nuclear ribonucleoprotein: heterogeneous nuclear RNA is complexed with a major sextet of proteins in vivo. Proc Natl Acad Sci U S A (1983) 2.19

Comparison of proteins bound to heterogeneous nuclear RNA and messenger RNA in HeLa cells. J Mol Biol (1975) 2.00

Nuclear domains of the RNA subunit of RNase P. J Cell Sci (1997) 1.99

The Mr 70,000 protein of the U1 small nuclear ribonucleoprotein particle binds to the 5' stem-loop of U1 RNA and interacts with Sm domain proteins. Proc Natl Acad Sci U S A (1988) 1.98

Signal recognition particle components in the nucleolus. Proc Natl Acad Sci U S A (2000) 1.95

Regulated transcription of the genes for actin and heat-shock proteins in cultured Drosophila cells. J Cell Biol (1981) 1.95

Reconstitution of the U1 small nuclear ribonucleoprotein particle. Mol Cell Biol (1987) 1.94

The Malmö polymorphism of factor IX: establishing the genotypes by rapid analysis of DNA. Blood (1989) 1.93

Chromatin structure and the cell cycle. Proc Natl Acad Sci U S A (1972) 1.91

Localization of signal recognition particle RNA in the nucleolus of mammalian cells. Proc Natl Acad Sci U S A (1998) 1.89

Intracellular site of U1 small nuclear RNA processing and ribonucleoprotein assembly. J Cell Biol (1984) 1.81

Nuclear ribonucleoprotein particles probed in living cells. Proc Natl Acad Sci U S A (1981) 1.79

Dynamic localization of RNase MRP RNA in the nucleolus observed by fluorescent RNA cytochemistry in living cells. J Cell Biol (1995) 1.77

Localization of pre-messenger RNA at discrete nuclear sites. Proc Natl Acad Sci U S A (1991) 1.74

Poly (A)-rich ribonucleoprotein complexes from HeLa cell messenger RNA. J Biol Chem (1976) 1.74

Small nuclear ribonucleoproteins of Drosophila: identification of U1 RNA-associated proteins and their behavior during heat shock. Mol Cell Biol (1982) 1.70

Crosslinking of hnRNP proteins to pre-mRNA requires U1 and U2 snRNPs. Nucleic Acids Res (1990) 1.68

Ribonucleoprotein organization of polyadenylate sequences in HeLa cell heterogeneous nuclear RNA. J Mol Biol (1975) 1.67

Transcription-dependent localization of U1 and U2 small nuclear ribonucleoproteins at major sites of gene activity in polytene chromosomes. J Mol Biol (1984) 1.66

Protein binding sites are conserved in U1 small nuclear RNA from insects and mammals. Proc Natl Acad Sci U S A (1983) 1.63

cDNA cloning of a human autoimmune nuclear ribonucleoprotein antigen. Proc Natl Acad Sci U S A (1985) 1.59

U1 small nuclear ribonucleoprotein particle-specific proteins interact with the first and second stem-loops of U1 RNA, with the A protein binding directly to the RNA independently of the 70K and Sm proteins. Mol Cell Biol (1989) 1.56

Heat shock alters nuclear ribonucleoprotein assembly in Drosophila cells. Mol Cell Biol (1983) 1.54

Chromatin: its isolation from cultured mammalian cells with particular reference to contamination by nuclear ribnucleoprotein particles. Biochemistry (1973) 1.54

Small nuclear RNA U2 is base-paired to heterogeneous nuclear RNA. Science (1982) 1.53

Site-specific excision from RNA by RNase H and mixed-phosphate-backbone oligodeoxynucleotides. Proc Natl Acad Sci U S A (1990) 1.50

Eukaryotic small ribonucleoproteins. Anti-La human autoantibodies react with U1 RNA-protein complexes. J Biol Chem (1984) 1.46

Comparison of mitotic phenomena and effects induced by hypertonic solutions in HeLa cells. J Cell Biol (1970) 1.37

Precursors of U4 small nuclear RNA. J Cell Biol (1984) 1.36

Transcription of a human U6 small nuclear RNA gene in vivo withstands deletion of intragenic sequences but not of an upstream TATATA box. Nucleic Acids Res (1989) 1.36

Review: movement of mRNA from transcription site to nuclear pores. J Struct Biol (2000) 1.35

Messenger RNA processing and nuclear structure: isolation of nuclear ribonucleoprotein particles containing beta-globin messenger RNA precursors. J Cell Biol (1980) 1.35

Nuclear RNA-protein interactions and messenger RNA processing. J Cell Biol (1983) 1.33

Nonhistone chromosomal proteins in synchronized HeLa cells. Proc Natl Acad Sci U S A (1972) 1.32

Secondary structure of heterogeneous nuclear RNA: two classes of double-stranded RNA in native ribonucleoprotein. Proc Natl Acad Sci U S A (1977) 1.31

The small nuclear RNAs of Drosophila. J Mol Biol (1984) 1.30

Serine/threonine phosphorylation regulates binding of C hnRNP proteins to pre-mRNA. Proc Natl Acad Sci U S A (1993) 1.28

Diffusional protein transport within the nucleus: a message in the medium. Nat Cell Biol (2000) 1.26

Ribonucleoprotein particles containing heterogeneous nuclear RNA in the cellular slime mold Dictyostelium discoideum. Proc Natl Acad Sci U S A (1975) 1.25

Pseudouridine formation in U2 small nuclear RNA. Proc Natl Acad Sci U S A (1994) 1.24

Iron: its intracellular localization and possible role in cell division. Proc Natl Acad Sci U S A (1970) 1.20

Gene activation in eukaryotes: are nuclear acidic proteins the cause or the effect? Proc Natl Acad Sci U S A (1974) 1.20

U2 small nuclear RNP assembly in vitro. Nucleic Acids Res (1989) 1.18

Isolation and characterization of ribonucleoprotein particles containing heterogeneous nuclear RNA. Methods Cell Biol (1978) 1.17

Contact-site cross-linking agents. Mol Cell Biochem (1981) 1.17

U1 small nuclear ribonucleoprotein studied by in vitro assembly. J Cell Biol (1983) 1.16

Ribonucleoprotein organization of eukaryotic RNA. XXXII. U2 small nuclear RNA precursors and their accurate 3' processing in vitro as ribonucleoprotein particles. J Mol Biol (1985) 1.15

Nucleoprotein organization of inverted repeat DNA transcripts in heterogeneous nuclear RNA-ribonucleoprotein particles from HeLa cells. J Mol Biol (1978) 1.15

Sequence complexity of nuclear and messenger RNA in HeLa cells. J Mol Biol (1980) 1.15

Heterogeneous nuclear RNA double-stranded regions probed in living HeLa cells by crosslinking with the psoralen derivative aminomethyltrioxsalen. Proc Natl Acad Sci U S A (1979) 1.15

Chromatin structure and the cell division cycle. Actinomycin binding in synchronized HeLa cells. J Cell Biol (1972) 1.11

A 62,000 molecular weight spliceosome protein crosslinks to the intron polypyrimidine tract. Nucleic Acids Res (1990) 1.10

Accurate and efficient 3' processing of U2 small nuclear RNA precursor in a fractionated cytoplasmic extract. Mol Cell Biol (1987) 1.10

In vitro assembly of a pre-messenger ribonucleoprotein. Proc Natl Acad Sci U S A (1983) 1.09

Evidence for a role of RNA in eukaryotic chromosome structure. Metabolically stable, small nuclear RNA species are covalently linked to chromosomal DNA in HeLa cells. J Mol Biol (1979) 1.07

Functional characterization of elements in a human U6 small nuclear RNA gene distal control region. Mol Cell Biol (1993) 1.07

A special class of non-histone protein tightly complexed with template-inactive DNA in chromatin. Biochemistry (1975) 1.07

Relationship between protein synthesis and ribosome assembly in HeLa cells. J Mol Biol (1971) 1.06

The transcriptional start site for a human U6 small nuclear RNA gene is dictated by a compound promoter element consisting of the PSE and the TATA box. Nucleic Acids Res (1992) 1.05

A 7-methylguanosine cap commits U3 and U8 small nuclear RNAs to the nucleolar localization pathway. Nucleic Acids Res (1998) 1.05

U2 small nuclear RNA 3' end formation is directed by a critical internal structure distinct from the processing site. Mol Cell Biol (1993) 1.04

RNA processing and ribonucleoprotein assembly studied in vivo by RNA transfection. Proc Natl Acad Sci U S A (1990) 1.03

Identification of proteins that bind tightly to pre-mRNA during in vitro splicing. Proc Natl Acad Sci U S A (1986) 1.03

Ribonucleoprotein organization of eukaryotic RNA. XXXI. Structure of the U1 small nuclear ribonucleoprotein. J Mol Biol (1984) 0.99

Ribonucleoprotein organization of eukaryotic RNA. XXX. Evidence that U1 small nuclear RNA is a ribonucleoprotein when base-paired with pre-messenger RNA in vivo. J Mol Biol (1984) 0.99

Histone-DNA interactions within chromatin. Isolation of histones from DNA-histone adducts induced in nuclei by UV light. Nucleic Acids Res (1978) 0.98

A human U2 RNA mutant stalled in 3' end processing is impaired in nuclear import. Nucleic Acids Res (1999) 0.95

Isolation and characterization of chromatin from the cellular slime mold, Dictyostelium discoideum. Biochemistry (1977) 0.95

A beta-like DNA polymerase activity in the slime mold Dictyostelium discoideum. Proc Natl Acad Sci U S A (1980) 0.94

A method for improving synchrony in the G2 phase of the cell cycle. J Cell Biol (1971) 0.94

Ribonucleoprotein organization of eukaryotic RNA. XV. Different nucleoprotein structures of globin messenger RNA sequences in nuclear and polyribosomal ribonucleoprotein particles. J Mol Biol (1981) 0.94

Messenger RNA biosynthesis and nuclear structure. Am Sci (1981) 0.93

Messenger RNA sequences in nuclear ribonucleoprotein particles are complexed with protein as shown by nuclease protection. J Mol Biol (1981) 0.92

The utility of a HindIII polymorphism of factor VIII examined by rapid DNA analysis. Br J Haematol (1990) 0.92

Molecular cloning of a cDNA encoding human SPH-binding factor, a conserved protein that binds to the enhancer-like region of the U6 small nuclear RNA gene promoter. Nucleic Acids Res (1998) 0.91

Heterogeneous nuclear RNA secondary structure: oligo (U) sequences base-paired with poly (A) and their possible role as binding sites for heterogeneous nuclear RNA-specific proteins. Proc Natl Acad Sci U S A (1977) 0.91

3' processing of human pre-U2 small nuclear RNA: a base-pairing interaction between the 3' extension of the precursor and an internal region. Mol Cell Biol (1997) 0.90

Assembly of nuclear ribonucleoprotein particles during in vitro transcription. Proc Natl Acad Sci U S A (1982) 0.88

G2-population cells in mouse kidney and duodenum and their behavior during the cell division cycle. Exp Cell Res (1970) 0.88

Photochemical cross-linking of secondary structure in HeLa cell heterogeneous nuclear RNA in situ 1. Nucleic Acids Res (1979) 0.88

Chromatin structure and gene transcription: nucleosomes permit a new synthesis. Int Rev Cytol (1978) 0.87

The U2 small nuclear ribonucleoprotein particle associates with nuclear factors in a pre-mRNA independent reaction. J Biol Chem (1991) 0.87

RNA synthesis in HeLa cells. Pattern in hypertonic medium and its similarity to synthesis during G2-prophase. J Cell Biol (1970) 0.86

Both RNA polymerase III and RNA polymerase II accurately initiate transcription from a human U6 promoter in vitro. Biochem Biophys Res Commun (1995) 0.86

A discrete 3' region of U6 small nuclear RNA modulates the phosphorylation cycle of the C1 heterogeneous nuclear ribonucleoprotein particle protein. Mol Cell Biol (1996) 0.86

Identification of an essential proximal sequence element in the promoter of the telomerase RNA gene of Tetrahymena thermophila. Nucleic Acids Res (1999) 0.85

RNA-dependent phosphorylation of a nuclear RNA binding protein. Proc Natl Acad Sci U S A (1997) 0.85

The C-group heterogeneous nuclear ribonucleoprotein proteins bind to the 5' stem-loop of the U2 small nuclear ribonucleoprotein particle. J Biol Chem (1996) 0.84

Phosphorylation of messenger RNA-bound proteins in HeLa cells. Biochem Biophys Res Commun (1975) 0.84

Chromosomal proteins: tightly bound nucleic acid and its bearing on the measurement of nonhistone protein phosphorylation. Anal Biochem (1976) 0.83